Literature DB >> 23424406

Poly[diaqua-(μ(4)-carboxyl-atomethyl-phospho-nato)(μ(4)-carb-oxy-methyl-phospho-nato)penta-deca-methyl-penta-tin(IV)].

Mouhamadou Sembene Boye1, Aminata Diasse-Sarr, Arnaud Grosjean, Philippe Guionneau.   

Abstract

The central Sn(IV) atom of the penta-nuclear title complex, {[Sn(CH(3))(3)](3)O(2)C(CH(2))PO(3)[Sn(CH(3))(3)(H(2)O)](2)HO(2)C(CH(2))PO(3)}, is located on a twofold rotation axis; due to symmetry, the H atom of the carboxyl group of the anion is disordered with a site occupancy of 0.5. The central Sn(IV) atom is bonded to three methyl groups (one of which is disordered about the twofold rotation axis) and is symmetrically trans coordinated by two phospho-nate groups with Sn-O = 2.2665 (12) Å while the other SnMe(3) residues are asymmetrically trans coordinated with Sn-O = 2.1587 (12) and 2.3756 (13) Å for one residue and Sn-O = 2.1522 (12) and 2.4335 (12) Å for the other; the Sn-O distances involving two O atoms trans to carboxyl-ate are longer than those trans to phospho-nate groups. The Sn-C distances lie in a very narrow range [2.112 (2)-2.133 (3) Å]. The oxyanion behaves as a tetra-coordinating ligand. The bridging mode of the latter leads to the formation of layers parallel to (001) that are inter-connected by O-H⋯O and C-H⋯O hydrogen bonds.

Entities:  

Year:  2013        PMID: 23424406      PMCID: PMC3569204          DOI: 10.1107/S1600536813000676

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of tin-based materials, see: Dutrecq et al. (1992 ▶); Basu Baul et al. (2011 ▶). For related structures, see: Zhang et al. (2010 ▶).

Experimental

Crystal data

[Sn5(CH3)15(C2H2O5P)(C2H3O5P)(H2O)2] M = 1130.01 Monoclinic, a = 11.6939 (2) Å b = 13.1689 (3) Å c = 25.9575 (5) Å β = 95.40 (1)° V = 3979.61 (14) Å3 Z = 4 Mo Kα radiation μ = 3.22 mm−1 T = 150 K 0.32 × 0.15 × 0.15 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: multi-scan (SCALEPACK; Otwinowski & Minor, 1997 ▶) T min = 0.426, T max = 0.644 15302 measured reflections 7932 independent reflections 7236 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.022 wR(F 2) = 0.054 S = 1.09 7932 reflections 182 parameters H-atom parameters constrained Δρmax = 1.14 e Å−3 Δρmin = −0.85 e Å−3 Data collection: COLLECT (Nonius, 2003 ▶); cell refinement: SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO (Otwinowski & Minor, 1997 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 2012 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813000676/pv2611sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813000676/pv2611Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Sn5(CH3)15(C2H2O5P)(C2H3O5P)(H2O)2]F(000) = 2176
Mr = 1130.01Dx = 1.886 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 34199 reflections
a = 11.6939 (2) Åθ = 1.0–33.7°
b = 13.1689 (3) ŵ = 3.22 mm1
c = 25.9575 (5) ÅT = 150 K
β = 95.40 (1)°Prism, colorless
V = 3979.61 (14) Å30.32 × 0.15 × 0.15 mm
Z = 4
Nonius KappaCCD diffractometer7932 independent reflections
Radiation source: fine-focus sealed tube7236 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.020
φ and ω scans with κ ofsetθmax = 33.8°, θmin = 2.3°
Absorption correction: multi-scan (SCALEPACK; Otwinowski & Minor, 1997)h = −18→18
Tmin = 0.426, Tmax = 0.644k = −20→20
15302 measured reflectionsl = −40→40
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.022H-atom parameters constrained
wR(F2) = 0.054w = 1/[σ2(Fo2) + (0.0207P)2 + 4.2723P] where P = (Fo2 + 2Fc2)/3
S = 1.09(Δ/σ)max = 0.005
7932 reflectionsΔρmax = 1.14 e Å3
182 parametersΔρmin = −0.85 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.00041 (3)
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Sn10.50000.755553 (11)0.25000.01394 (4)
Sn30.657492 (10)0.979143 (8)0.093373 (4)0.01521 (3)
Sn20.178461 (10)0.935201 (8)0.137009 (4)0.01528 (3)
P10.43748 (3)0.80781 (3)0.118293 (15)0.01189 (7)
O50.33357 (11)0.57344 (9)0.08457 (5)0.0182 (2)
O40.24248 (11)0.67603 (9)0.02767 (5)0.0180 (2)
O10.50422 (11)0.75081 (9)0.16291 (5)0.0161 (2)
O30.49774 (11)0.90382 (9)0.10334 (5)0.0186 (2)
C70.6528 (2)0.94022 (17)0.01376 (8)0.0302 (4)
H7A0.61360.9940−0.00720.045*
H7B0.61120.87610.00760.045*
H7C0.73140.93260.00410.045*
O20.31351 (10)0.82643 (9)0.12850 (5)0.0183 (2)
C90.43300 (13)0.72417 (12)0.06161 (6)0.0139 (3)
H9A0.42990.76630.02990.017*
H9B0.50460.68360.06340.017*
C20.50000.9175 (2)0.25000.0258 (5)
H2A0.49760.94240.21430.039*0.50
H2B0.56990.94240.26980.039*0.50
H2C0.43250.94240.26580.039*0.50
C80.33124 (13)0.65301 (12)0.05775 (6)0.0135 (3)
C10.34603 (16)0.66906 (15)0.24300 (7)0.0225 (3)
H1A0.30630.67880.20840.034*
H1B0.29620.69150.26910.034*
H1C0.36450.59700.24820.034*
C40.28441 (19)1.06554 (15)0.13493 (10)0.0303 (4)
H4A0.23711.12450.12390.045*
H4B0.34201.05430.11050.045*
H4C0.32301.07810.16950.045*
C50.07938 (19)0.89233 (17)0.06770 (8)0.0298 (4)
H5A0.10510.82580.05640.045*
H5B0.08910.94290.04080.045*
H5C−0.00180.88850.07400.045*
C30.1385 (2)0.86901 (18)0.20725 (8)0.0326 (5)
H3A0.20460.87550.23320.049*
H3B0.12040.79700.20160.049*
H3C0.07210.90380.21950.049*
C60.59248 (18)1.11584 (15)0.12221 (9)0.0284 (4)
H6A0.56121.10250.15530.043*
H6B0.53161.14240.09730.043*
H6C0.65461.16580.12740.043*
O60.02501 (12)1.04809 (10)0.14945 (6)0.0235 (3)
C100.76318 (18)0.88614 (18)0.14468 (9)0.0339 (5)
H10A0.81420.92900.16750.051*
H10B0.80930.84130.12470.051*
H10C0.71490.84510.16550.051*
H1O−0.03741.04360.12730.050*
H2O0.03501.11180.15390.050*
H1O40.22730.63430.00290.050*0.50
U11U22U33U12U13U23
Sn10.01612 (7)0.01318 (7)0.01246 (7)0.0000.00108 (5)0.000
Sn30.01622 (5)0.01419 (5)0.01498 (5)−0.00358 (3)0.00010 (4)0.00139 (3)
Sn20.01507 (5)0.01522 (5)0.01564 (6)0.00115 (3)0.00182 (4)−0.00054 (4)
P10.01177 (16)0.01130 (16)0.01267 (17)−0.00176 (12)0.00149 (13)0.00042 (13)
O50.0157 (5)0.0162 (5)0.0220 (6)−0.0029 (4)−0.0018 (5)0.0060 (4)
O40.0163 (5)0.0181 (5)0.0183 (5)−0.0042 (4)−0.0044 (4)0.0046 (4)
O10.0189 (6)0.0169 (5)0.0123 (5)0.0013 (4)0.0005 (4)0.0005 (4)
O30.0183 (6)0.0140 (5)0.0232 (6)−0.0066 (4)0.0010 (5)0.0020 (4)
C70.0352 (11)0.0341 (11)0.0217 (9)−0.0133 (8)0.0055 (8)−0.0054 (8)
O20.0134 (5)0.0166 (5)0.0258 (6)0.0008 (4)0.0063 (4)−0.0011 (5)
C90.0130 (6)0.0166 (7)0.0123 (6)−0.0039 (5)0.0017 (5)0.0001 (5)
C20.0419 (16)0.0156 (10)0.0194 (11)0.0000.0006 (11)0.000
C80.0130 (6)0.0135 (6)0.0140 (6)−0.0020 (5)0.0013 (5)0.0000 (5)
C10.0201 (8)0.0262 (9)0.0207 (8)−0.0057 (6)−0.0012 (6)0.0045 (7)
C40.0254 (9)0.0188 (8)0.0481 (13)−0.0023 (7)0.0104 (9)−0.0041 (8)
C50.0308 (10)0.0330 (10)0.0244 (9)0.0088 (8)−0.0042 (8)−0.0088 (8)
C30.0387 (12)0.0343 (11)0.0269 (10)0.0160 (9)0.0150 (9)0.0104 (8)
C60.0264 (9)0.0196 (8)0.0406 (11)−0.0068 (7)0.0110 (8)−0.0071 (8)
O60.0195 (6)0.0186 (6)0.0308 (7)0.0076 (5)−0.0062 (5)−0.0057 (5)
C100.0244 (9)0.0344 (11)0.0411 (12)−0.0056 (8)−0.0063 (9)0.0204 (9)
Sn1—C12.124 (2)C9—C81.511 (2)
Sn1—C1i2.124 (2)C9—H9A0.9900
Sn1—C22.133 (3)C9—H9B0.9900
Sn1—O1i2.2665 (12)C2—H2A0.9800
Sn1—O12.2665 (12)C2—H2B0.9800
Sn3—C62.118 (2)C2—H2C0.9800
Sn3—C102.119 (2)C1—H1A0.9800
Sn3—C72.125 (2)C1—H1B0.9800
Sn3—O32.1522 (12)C1—H1C0.9800
Sn3—O5ii2.4335 (12)C4—H4A0.9800
Sn2—C32.112 (2)C4—H4B0.9800
Sn2—C42.120 (2)C4—H4C0.9800
Sn2—C52.123 (2)C5—H5A0.9800
Sn2—O22.1587 (12)C5—H5B0.9800
Sn2—O62.3756 (13)C5—H5C0.9800
P1—O31.5156 (12)C3—H3A0.9800
P1—O21.5180 (13)C3—H3B0.9800
P1—O11.5310 (12)C3—H3C0.9800
P1—C91.8348 (16)C6—H6A0.9800
O5—C81.2571 (19)C6—H6B0.9800
O5—Sn3iii2.4335 (12)C6—H6C0.9800
O4—C81.2752 (19)O6—H1O0.8900
O4—H1O40.8500O6—H2O0.8500
C7—H7A0.9800C10—H10A0.9800
C7—H7B0.9800C10—H10B0.9800
C7—H7C0.9800C10—H10C0.9800
C1—Sn1—C1i115.13 (11)P1—C9—H9B109.0
C1—Sn1—C2122.43 (6)H9A—C9—H9B107.8
C1i—Sn1—C2122.43 (6)Sn1—C2—H2A109.5
C1—Sn1—O1i88.44 (6)Sn1—C2—H2B109.5
C1i—Sn1—O1i89.87 (6)H2A—C2—H2B109.5
C2—Sn1—O1i91.58 (3)Sn1—C2—H2C109.5
C1—Sn1—O189.87 (6)H2A—C2—H2C109.5
C1i—Sn1—O188.44 (6)H2B—C2—H2C109.5
C2—Sn1—O191.58 (3)O5—C8—O4120.75 (14)
O1i—Sn1—O1176.84 (6)O5—C8—C9120.30 (14)
C6—Sn3—C10118.46 (10)O4—C8—C9118.94 (14)
C6—Sn3—C7124.85 (9)Sn1—C1—H1A109.5
C10—Sn3—C7115.59 (10)Sn1—C1—H1B109.5
C6—Sn3—O390.27 (6)H1A—C1—H1B109.5
C10—Sn3—O396.87 (7)Sn1—C1—H1C109.5
C7—Sn3—O393.58 (7)H1A—C1—H1C109.5
C6—Sn3—O5ii86.24 (6)H1B—C1—H1C109.5
C10—Sn3—O5ii84.57 (6)Sn2—C4—H4A109.5
C7—Sn3—O5ii88.65 (7)Sn2—C4—H4B109.5
O3—Sn3—O5ii176.51 (5)H4A—C4—H4B109.5
C3—Sn2—C4122.21 (10)Sn2—C4—H4C109.5
C3—Sn2—C5118.33 (10)H4A—C4—H4C109.5
C4—Sn2—C5117.86 (10)H4B—C4—H4C109.5
C3—Sn2—O292.16 (7)Sn2—C5—H5A109.5
C4—Sn2—O295.72 (7)Sn2—C5—H5B109.5
C5—Sn2—O294.76 (7)H5A—C5—H5B109.5
C3—Sn2—O684.82 (7)Sn2—C5—H5C109.5
C4—Sn2—O686.99 (7)H5A—C5—H5C109.5
C5—Sn2—O685.56 (6)H5B—C5—H5C109.5
O2—Sn2—O6176.72 (5)Sn2—C3—H3A109.5
O3—P1—O2112.62 (7)Sn2—C3—H3B109.5
O3—P1—O1112.74 (7)H3A—C3—H3B109.5
O2—P1—O1111.98 (7)Sn2—C3—H3C109.5
O3—P1—C9105.92 (7)H3A—C3—H3C109.5
O2—P1—C9106.33 (7)H3B—C3—H3C109.5
O1—P1—C9106.64 (7)Sn3—C6—H6A109.5
C8—O5—Sn3iii120.20 (10)Sn3—C6—H6B109.5
C8—O4—H1O4114.10H6A—C6—H6B109.5
P1—O1—Sn1133.13 (7)Sn3—C6—H6C109.5
P1—O3—Sn3147.67 (8)H6A—C6—H6C109.5
Sn3—C7—H7A109.5H6B—C6—H6C109.5
Sn3—C7—H7B109.5Sn2—O6—H1O117.00
H7A—C7—H7B109.5Sn2—O6—H2O123.00
Sn3—C7—H7C109.5H1O—O6—H2O104.00
H7A—C7—H7C109.5Sn3—C10—H10A109.5
H7B—C7—H7C109.5Sn3—C10—H10B109.5
P1—O2—Sn2147.66 (8)H10A—C10—H10B109.5
C8—C9—P1112.86 (11)Sn3—C10—H10C109.5
C8—C9—H9A109.0H10A—C10—H10C109.5
P1—C9—H9A109.0H10B—C10—H10C109.5
C8—C9—H9B109.0
O3—P1—O1—Sn191.91 (11)O1—P1—O2—Sn2121.26 (15)
O2—P1—O1—Sn1−36.34 (12)C9—P1—O2—Sn2−122.63 (15)
C9—P1—O1—Sn1−152.26 (9)C3—Sn2—O2—P1−130.11 (17)
C1—Sn1—O1—P176.70 (11)C4—Sn2—O2—P1−7.43 (17)
C1i—Sn1—O1—P1−168.15 (11)C5—Sn2—O2—P1111.23 (16)
C2—Sn1—O1—P1−45.74 (10)O3—P1—C9—C8−151.17 (11)
O2—P1—O3—Sn3164.46 (14)O2—P1—C9—C8−31.14 (13)
O1—P1—O3—Sn336.55 (17)O1—P1—C9—C888.51 (12)
C9—P1—O3—Sn3−79.71 (16)Sn3iii—O5—C8—O4−12.4 (2)
C6—Sn3—O3—P1−142.37 (16)Sn3iii—O5—C8—C9166.22 (11)
C10—Sn3—O3—P1−23.64 (17)P1—C9—C8—O5−80.06 (17)
C7—Sn3—O3—P192.69 (16)P1—C9—C8—O498.60 (16)
O3—P1—O2—Sn2−7.05 (18)
D—H···AD—HH···AD···AD—H···A
O6—H1O···O5iv0.891.832.693 (2)164
O6—H2O···O1iv0.851.882.706 (2)161
C9—H9A···O4v0.992.513.227 (2)129
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O6—H1O⋯O5i 0.891.832.693 (2)164
O6—H2O⋯O1i 0.851.882.706 (2)161
C9—H9A⋯O4ii 0.992.513.227 (2)129

Symmetry codes: (i) ; (ii) .

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