Literature DB >> 23424146

Incorporating expert terminology and disease risk factors into consumer health vocabularies.

Michael Seedorff1, Kevin J Peterson, Laurie A Nelsen, Cristian Cocos, Jennifer B McCormick, Christopher G Chute, Jyotishman Pathak.   

Abstract

It is well-known that the general health information seeking lay-person, regardless of his/her education, cultural background, and economic status, is not as familiar with-or comfortable using-the technical terms commonly used by healthcare professionals. One of the primary reasons for this is due to the differences in perspectives and understanding of the vocabulary used by patients and providers even when referring to the same health concept. To bridge this "knowledge gap," consumer health vocabularies are presented as a solution. In this study, we introduce the Mayo Consumer Health Vocabulary (MCV)-a taxonomy of approximately 5,000 consumer health terms and concepts-and develop text-mining techniques to expand its coverage by integrating disease concepts (from UMLS) as well as non-genetic (from deCODEme) and genetic (from GeneWiki+ and PharmGKB) risk factors to diseases. These steps led to adding at least one synonym for 97% of MCV concepts with an average of 43 consumer friendly terms per concept. We were also able to associate risk factors to 38 common diseases, as well as establish 5,361 Disease:Gene pairings. The expanded MCV provides a robust resource for facilitating online health information searching and retrieval as well as building consumer-oriented healthcare applications.

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Mesh:

Year:  2013        PMID: 23424146      PMCID: PMC3587774     

Source DB:  PubMed          Journal:  Pac Symp Biocomput        ISSN: 2335-6928


  14 in total

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Journal:  Bull Med Libr Assoc       Date:  2000-01

Review 2.  Consumer health information seeking on the Internet: the state of the art.

Authors:  R J Cline; K M Haynes
Journal:  Health Educ Res       Date:  2001-12

3.  The Unified Medical Language System (UMLS): integrating biomedical terminology.

Authors:  Olivier Bodenreider
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

4.  Using a terminology server and consumer search phrases to help patients find physicians with particular expertise.

Authors:  Curtis L Cole; Andrew S Kanter; Michael Cummens; Sean Vostinar; Frank Naeymi-Rad
Journal:  Stud Health Technol Inform       Date:  2004

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Authors:  D L Borzekowski; V I Rickert
Journal:  Arch Pediatr Adolesc Med       Date:  2001-07

6.  PharmGKB: a logical home for knowledge relating genotype to drug response phenotype.

Authors:  Russ B Altman
Journal:  Nat Genet       Date:  2007-04       Impact factor: 38.330

7.  Making texts in electronic health records comprehensible to consumers: a prototype translator.

Authors:  Qing Zeng-Treitler; Sergey Goryachev; Hyeoneui Kim; Alla Keselman; Douglas Rosendale
Journal:  AMIA Annu Symp Proc       Date:  2007-10-11

8.  Controlled vocabularies for consumer health.

Authors:  Rita D Zielstorff
Journal:  J Biomed Inform       Date:  2003 Aug-Oct       Impact factor: 6.317

9.  BioPortal: enhanced functionality via new Web services from the National Center for Biomedical Ontology to access and use ontologies in software applications.

Authors:  Patricia L Whetzel; Natalya F Noy; Nigam H Shah; Paul R Alexander; Csongor Nyulas; Tania Tudorache; Mark A Musen
Journal:  Nucleic Acids Res       Date:  2011-06-14       Impact factor: 16.971

10.  Term identification methods for consumer health vocabulary development.

Authors:  Qing T Zeng; Tony Tse; Guy Divita; Alla Keselman; Jon Crowell; Allen C Browne; Sergey Goryachev; Long Ngo
Journal:  J Med Internet Res       Date:  2007-02-28       Impact factor: 5.428

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  3 in total

Review 1.  Aspiring to Unintended Consequences of Natural Language Processing: A Review of Recent Developments in Clinical and Consumer-Generated Text Processing.

Authors:  D Demner-Fushman; N Elhadad
Journal:  Yearb Med Inform       Date:  2016-11-10

2.  Evaluating the process of online health information searching: a qualitative approach to exploring consumer perspectives.

Authors:  Alexander S Fiksdal; Ashok Kumbamu; Ashutosh S Jadhav; Cristian Cocos; Laurie A Nelsen; Jyotishman Pathak; Jennifer B McCormick
Journal:  J Med Internet Res       Date:  2014-10-07       Impact factor: 5.428

3.  Consumers' Use of UMLS Concepts on Social Media: Diabetes-Related Textual Data Analysis in Blog and Social Q&A Sites.

Authors:  Min Sook Park; Zhe He; Zhiwei Chen; Sanghee Oh; Jiang Bian
Journal:  JMIR Med Inform       Date:  2016-11-24
  3 in total

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