Literature DB >> 23422942

Disruption of EXOC6B in a patient with developmental delay, epilepsy, and a de novo balanced t(2;8) translocation.

Anne Frühmesser1, Jonathon Blake, Edda Haberlandt, Bianka Baying, Benjamin Raeder, Heiko Runz, Ana Spreiz, Christine Fauth, Vladimir Benes, Gerd Utermann, Johannes Zschocke, Dieter Kotzot.   

Abstract

Most balanced chromosomal aberrations are not associated with a clinical phenotype, however, in some patients they may disrupt gene structure. With the development of various next-generation sequencing techniques, fast and specific analyses of the breakpoint regions of chromosomal rearrangements are possible. Here, we report on a 19-year-old woman with a de novo balanced translocation t(2;8)(p13.2;q22.1) and a severe clinical phenotype including intellectual disability, epilepsy, behavioral features resembling autism, and minor dysmorphic features. By next-generation sequencing, we defined the breakpoints and found disruption of the exocyst complex component 6B (EXOC6B) gene in intron 1 on chromosome 2p13.2 involving two Alu elements with a homology of 81%. No gene was found at the respective breakpoint on chromosome 8. Expression analysis of the EXOC6B in blood lymphocytes and buccal smear revealed reduced expression in the patient in comparison with the control. Our findings in combination with one recently published case and one other patient listed in DECIPHER v5.1 indicate EXOC6B as a gene relevant for intellectual development and electrophysiological stability.

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Year:  2013        PMID: 23422942      PMCID: PMC3778356          DOI: 10.1038/ejhg.2013.18

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   4.246


  14 in total

1.  A balanced translocation t(6;14)(q25.3;q13.2) leading to reciprocal fusion transcripts in a patient with intellectual disability and agenesis of corpus callosum.

Authors:  L Backx; E Seuntjens; K Devriendt; J Vermeesch; H Van Esch
Journal:  Cytogenet Genome Res       Date:  2010-10-30       Impact factor: 1.636

2.  A de novo balanced translocation t(7;12)(p21.2;p12.3) in a patient with Saethre-Chotzen-like phenotype downregulates TWIST and an osteoclastic protein-tyrosine phosphatase, PTP-oc.

Authors:  Patrizia De Marco; Alessandro Raso; Silvana Beri; Stefania Gimelli; Elisa Merello; Samantha Mascelli; Maurizia Baldi; Ave Maria Baffico; Marco Pavanello; Armando Cama; Valeria Capra; Roberto Giorda; Giorgio Gimelli
Journal:  Eur J Med Genet       Date:  2011-06-25       Impact factor: 2.708

3.  The brain exocyst complex interacts with RalA in a GTP-dependent manner: identification of a novel mammalian Sec3 gene and a second Sec15 gene.

Authors:  A Brymora; V A Valova; M R Larsen; B D Roufogalis; P J Robinson
Journal:  J Biol Chem       Date:  2001-06-13       Impact factor: 5.157

4.  Mutations in Drosophila sec15 reveal a function in neuronal targeting for a subset of exocyst components.

Authors:  Sunil Q Mehta; P Robin Hiesinger; Slobodan Beronja; R Grace Zhai; Karen L Schulze; Patrik Verstreken; Yu Cao; Yi Zhou; Ulrich Tepass; Michael C Crair; Hugo J Bellen
Journal:  Neuron       Date:  2005-04-21       Impact factor: 17.173

5.  The Exocyst is a multiprotein complex required for exocytosis in Saccharomyces cerevisiae.

Authors:  D R TerBush; T Maurice; D Roth; P Novick
Journal:  EMBO J       Date:  1996-12-02       Impact factor: 11.598

6.  A mutation in Sec15l1 causes anemia in hemoglobin deficit (hbd) mice.

Authors:  Jackie E Lim; Ou Jin; Carolyn Bennett; Kelly Morgan; Fudi Wang; Cameron C Trenor; Mark D Fleming; Nancy C Andrews
Journal:  Nat Genet       Date:  2005-10-16       Impact factor: 38.330

7.  Microdeletion found by array-CGH in girl with blepharophimosis syndrome and apparently balanced translocation t(3;15)(q23;q25).

Authors:  Cristina González-González; Maria García-Hoyos; Rosario Hernaez Calzón; Carolina Arroyo Díaz; Cristina González Fanego; Isabel Lorda Sánchez; Fernando Sánchez-Escribano
Journal:  Ophthalmic Genet       Date:  2011-12-15       Impact factor: 1.803

Review 8.  The exocyst complex in polarized exocytosis.

Authors:  Bing He; Wei Guo
Journal:  Curr Opin Cell Biol       Date:  2009-05-25       Impact factor: 8.382

9.  Sec15 is an effector for the Rab11 GTPase in mammalian cells.

Authors:  Xiang-Ming Zhang; Sarah Ellis; Absorn Sriratana; Christina A Mitchell; Tony Rowe
Journal:  J Biol Chem       Date:  2004-07-29       Impact factor: 5.157

10.  Sec15 interacts with Rab11 via a novel domain and affects Rab11 localization in vivo.

Authors:  Shuya Wu; Sunil Q Mehta; Franck Pichaud; Hugo J Bellen; Florante A Quiocho
Journal:  Nat Struct Mol Biol       Date:  2005-09-11       Impact factor: 15.369

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  12 in total

1.  Regulation of dendrite growth and maintenance by exocytosis.

Authors:  Yun Peng; Jiae Lee; Kimberly Rowland; Yuhui Wen; Hope Hua; Nicole Carlson; Shweta Lavania; Jay Z Parrish; Michael D Kim
Journal:  J Cell Sci       Date:  2015-10-19       Impact factor: 5.285

2.  Whole-Genome Sequencing of Cytogenetically Balanced Chromosome Translocations Identifies Potentially Pathological Gene Disruptions and Highlights the Importance of Microhomology in the Mechanism of Formation.

Authors:  Daniel Nilsson; Maria Pettersson; Peter Gustavsson; Alisa Förster; Wolfgang Hofmeister; Josephine Wincent; Vasilios Zachariadis; Britt-Marie Anderlid; Ann Nordgren; Outi Mäkitie; Valtteri Wirta; Max Käller; Francesco Vezzi; James R Lupski; Magnus Nordenskjöld; Elisabeth Syk Lundberg; Claudia M B Carvalho; Anna Lindstrand
Journal:  Hum Mutat       Date:  2016-12-05       Impact factor: 4.878

Review 3.  Human Structural Variation: Mechanisms of Chromosome Rearrangements.

Authors:  Brooke Weckselblatt; M Katharine Rudd
Journal:  Trends Genet       Date:  2015-07-22       Impact factor: 11.639

4.  The exocyst is required for photoreceptor ciliogenesis and retinal development.

Authors:  Glenn P Lobo; Diana Fulmer; Lilong Guo; Xiaofeng Zuo; Yujing Dang; Seok-Hyung Kim; Yanhui Su; Kola George; Elisabeth Obert; Ben Fogelgren; Deepak Nihalani; Russell A Norris; Bärbel Rohrer; Joshua H Lipschutz
Journal:  J Biol Chem       Date:  2017-07-20       Impact factor: 5.157

5.  A novel multiple joint dislocation syndrome associated with a homozygous nonsense variant in the EXOC6B gene.

Authors:  Katta Mohan Girisha; Fanny Kortüm; Hitesh Shah; Malik Alawi; Ashwin Dalal; Gandham SriLakshmi Bhavani; Kerstin Kutsche
Journal:  Eur J Hum Genet       Date:  2015-12-16       Impact factor: 4.246

6.  Unbalanced translocations arise from diverse mutational mechanisms including chromothripsis.

Authors:  Brooke Weckselblatt; Karen E Hermetz; M Katharine Rudd
Journal:  Genome Res       Date:  2015-06-12       Impact factor: 9.043

7.  Reconstruction of ancestral chromosome architecture and gene repertoire reveals principles of genome evolution in a model yeast genus.

Authors:  Nikolaos Vakirlis; Véronique Sarilar; Guénola Drillon; Aubin Fleiss; Nicolas Agier; Jean-Philippe Meyniel; Lou Blanpain; Alessandra Carbone; Hugo Devillers; Kenny Dubois; Alexandre Gillet-Markowska; Stéphane Graziani; Nguyen Huu-Vang; Marion Poirel; Cyrielle Reisser; Jonathan Schott; Joseph Schacherer; Ingrid Lafontaine; Bertrand Llorente; Cécile Neuvéglise; Gilles Fischer
Journal:  Genome Res       Date:  2016-05-31       Impact factor: 9.043

8.  The effects of aging on the BTBR mouse model of autism spectrum disorder.

Authors:  Joan M Jasien; Caitlin M Daimon; Rui Wang; Bruce K Shapiro; Bronwen Martin; Stuart Maudsley
Journal:  Front Aging Neurosci       Date:  2014-09-01       Impact factor: 5.750

9.  Targeted sequencing of 351 candidate genes for epileptic encephalopathy in a large cohort of patients.

Authors:  Carolien G F de Kovel; Eva H Brilstra; Marjan J A van Kempen; Ruben Van't Slot; Isaac J Nijman; Zaid Afawi; Peter De Jonghe; Tania Djémié; Renzo Guerrini; Katia Hardies; Ingo Helbig; Rik Hendrickx; Moine Kanaan; Uri Kramer; Anna-Elina E Lehesjoki; Johannes R Lemke; Carla Marini; Davide Mei; Rikke S Møller; Manuela Pendziwiat; Hannah Stamberger; Arvid Suls; Sarah Weckhuysen; Bobby P C Koeleman
Journal:  Mol Genet Genomic Med       Date:  2016-07-30       Impact factor: 2.183

10.  16p11.2 deletion in patients with paroxysmal kinesigenic dyskinesia but without intellectual disability.

Authors:  Wen Li; Yifan Wang; Bin Li; Bin Tang; Hui Sun; Jinxing Lai; Na He; Bingmei Li; Heng Meng; Weiping Liao; Xiaorong Liu
Journal:  Brain Behav       Date:  2018-10-11       Impact factor: 2.708

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