Literature DB >> 23414360

Emerging protein array technologies for proteomics.

Jung-Rok Lee1, Dewey Mitchell Magee, Richard Samuel Gaster, Joshua LaBaer, Shan X Wang.   

Abstract

Numerous efforts have been made to understand fundamental biology of diseases based on gene expression. However, the relationship between gene expression and onset of disease often remains obscure. The great advances in protein microarrays allow us to investigate this unclear question through protein profiles, which are regarded as more reliable than gene expressions to serve as the harbinger of disease onset or as the biomarker of disease treatment monitoring. The authors review two relatively new platforms of protein arrays, along with an introduction to the common basis of protein array technologies. Immobilization of proteins on the surface of arrays and neutralizing reactive areas after the immobilization are key practical issues in the field of protein array. One of the emerging protein array technologies is the magneto-nanosensor array, where giant magnetoresistive sensors are used to quantitatively measure the analytes of interest, which are labeled with magnetic nanoparticles. Similar to giant magnetoresistive sensors, several different ways of utilizing magnetic properties for biomolecular detection have been developed and are reviewed here. Another emerging protein array technology is nucleic acid programmable protein arrays, which have thousands of protein features directly expressed by nucleic acids on the array surface. The authors anticipate that these two emerging protein array platforms can be combined to produce synergistic benefits and open new applications in proteomics and clinical diagnostics.

Entities:  

Mesh:

Year:  2013        PMID: 23414360      PMCID: PMC4143142          DOI: 10.1586/epr.12.67

Source DB:  PubMed          Journal:  Expert Rev Proteomics        ISSN: 1478-9450            Impact factor:   3.940


  60 in total

Review 1.  Protein microarrays and proteomics.

Authors:  Gavin MacBeath
Journal:  Nat Genet       Date:  2002-12       Impact factor: 38.330

Review 2.  Protein microarrays: meeting analytical challenges for clinical applications.

Authors:  Lance A Liotta; Virginia Espina; Arpita I Mehta; Valerie Calvert; Kevin Rosenblatt; David Geho; Peter J Munson; Lynn Young; Julia Wulfkuhle; Emanuel F Petricoin
Journal:  Cancer Cell       Date:  2003-04       Impact factor: 31.743

3.  The path to personalized medicine.

Authors:  Margaret A Hamburg; Francis S Collins
Journal:  N Engl J Med       Date:  2010-06-15       Impact factor: 91.245

4.  A novel magnetic bead bioassay platform using a microchip-based sensor for infectious disease diagnosis.

Authors:  Turgut Aytur; Jonathan Foley; Mekhail Anwar; Bernhard Boser; Eva Harris; P Robert Beatty
Journal:  J Immunol Methods       Date:  2006-07-03       Impact factor: 2.303

5.  Reverse phase protein array: validation of a novel proteomic technology and utility for analysis of primary leukemia specimens and hematopoietic stem cells.

Authors:  Raoul Tibes; Yihua Qiu; Yiling Lu; Bryan Hennessy; Michael Andreeff; Gordon B Mills; Steven M Kornblau
Journal:  Mol Cancer Ther       Date:  2006-10       Impact factor: 6.261

6.  Quantification of cardiovascular biomarkers in patient plasma by targeted mass spectrometry and stable isotope dilution.

Authors:  Hasmik Keshishian; Terri Addona; Michael Burgess; D R Mani; Xu Shi; Eric Kuhn; Marc S Sabatine; Robert E Gerszten; Steven A Carr
Journal:  Mol Cell Proteomics       Date:  2009-07-13       Impact factor: 5.911

7.  Self-assembling protein microarrays.

Authors:  Niroshan Ramachandran; Eugenie Hainsworth; Bhupinder Bhullar; Samuel Eisenstein; Benjamin Rosen; Albert Y Lau; Johannes C Walter; Joshua LaBaer
Journal:  Science       Date:  2004-07-02       Impact factor: 47.728

8.  Matrix-insensitive protein assays push the limits of biosensors in medicine.

Authors:  Richard S Gaster; Drew A Hall; Carsten H Nielsen; Sebastian J Osterfeld; Heng Yu; Kathleen E Mach; Robert J Wilson; Boris Murmann; Joseph C Liao; Sanjiv S Gambhir; Shan X Wang
Journal:  Nat Med       Date:  2009-10-11       Impact factor: 53.440

9.  Autoassembly protein arrays for analyzing antibody cross-reactivity.

Authors:  Richard S Gaster; Drew A Hall; Shan X Wang
Journal:  Nano Lett       Date:  2010-08-30       Impact factor: 11.189

10.  Tumor targeting with antibody-functionalized, radiolabeled carbon nanotubes.

Authors:  Michael R McDevitt; Debjit Chattopadhyay; Barry J Kappel; Jaspreet Singh Jaggi; Scott R Schiffman; Christophe Antczak; Jon T Njardarson; Renier Brentjens; David A Scheinberg
Journal:  J Nucl Med       Date:  2007-07       Impact factor: 11.082

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  15 in total

1.  Integrated Microfluidics for Protein Modification Discovery.

Authors:  Meirav Noach-Hirsh; Hadas Nevenzal; Yair Glick; Evelin Chorni; Dorit Avrahami; Efrat Barbiro-Michaely; Doron Gerber; Amit Tzur
Journal:  Mol Cell Proteomics       Date:  2015-08-14       Impact factor: 5.911

Review 2.  Proteomic contributions to our understanding of vaccine and immune responses.

Authors:  Allison C Galassie; Andrew J Link
Journal:  Proteomics Clin Appl       Date:  2015-09-10       Impact factor: 3.494

Review 3.  Carbon Substrates: A Stable Foundation for Biomolecular Arrays.

Authors:  Matthew R Lockett; Lloyd M Smith
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2015-06-03       Impact factor: 10.745

Review 4.  National Cancer Institute Alliance for nanotechnology in cancer-Catalyzing research and translation toward novel cancer diagnostics and therapeutics.

Authors:  Christopher M Hartshorn; Luisa M Russell; Piotr Grodzinski
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2019-07-01

5.  Proteomic Monitoring of B Cell Immunity.

Authors:  Radwa Ewaisha; Karen S Anderson
Journal:  Methods Mol Biol       Date:  2016

Review 6.  Evaluation of optical detection platforms for multiplexed detection of proteins and the need for point-of-care biosensors for clinical use.

Authors:  Samantha Spindel; Kim E Sapsford
Journal:  Sensors (Basel)       Date:  2014-11-25       Impact factor: 3.576

7.  Experimental and theoretical investigation of the precise transduction mechanism in giant magnetoresistive biosensors.

Authors:  Jung-Rok Lee; Noriyuki Sato; Daniel J B Bechstein; Sebastian J Osterfeld; Junyi Wang; Adi Wijaya Gani; Drew A Hall; Shan X Wang
Journal:  Sci Rep       Date:  2016-01-05       Impact factor: 4.379

8.  Multiphoton-Polymerized 3D Protein Assay.

Authors:  Richard Wollhofen; Markus Axmann; Peter Freudenthaler; Christian Gabriel; Clemens Röhrl; Herbert Stangl; Thomas A Klar; Jaroslaw Jacak
Journal:  ACS Appl Mater Interfaces       Date:  2018-01-05       Impact factor: 9.229

9.  Ultrasensitive impedimetric lectin biosensors with efficient antifouling properties applied in glycoprofiling of human serum samples.

Authors:  Tomas Bertok; Ludmila Klukova; Alena Sediva; Peter Kasák; Vladislav Semak; Matej Micusik; Maria Omastova; Lucia Chovanová; Miroslav Vlček; Richard Imrich; Alica Vikartovska; Jan Tkac
Journal:  Anal Chem       Date:  2013-07-15       Impact factor: 6.986

Review 10.  Microintaglio Printing for Soft Lithography-Based in Situ Microarrays.

Authors:  Manish Biyani; Takanori Ichiki
Journal:  Microarrays (Basel)       Date:  2015-07-14
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