Literature DB >> 23407309

Waiting for the human intestinal Eukaryotome.

Lee O'Brien Andersen1, Henrik Vedel Nielsen, Christen Rune Stensvold.   

Abstract

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Year:  2013        PMID： 23407309      PMCID： PMC3695289          DOI： 10.1038/ismej.2013.21

Source DB:  PubMed          Journal:  ISME J        ISSN： 1751-7362            Impact factor:   10.302


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  13 in total

1.  Micro-eukaryotic diversity of the human distal gut microbiota: qualitative assessment using culture-dependent and -independent analysis of faeces.

Authors:  Pauline D Scanlan; Julian R Marchesi
Journal:  ISME J       Date:  2008-07-31       Impact factor: 10.302

2.  Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa.

Authors:  Carlotta De Filippo; Duccio Cavalieri; Monica Di Paola; Matteo Ramazzotti; Jean Baptiste Poullet; Sebastien Massart; Silvia Collini; Giuseppe Pieraccini; Paolo Lionetti
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-02       Impact factor: 11.205

3.  Gut microbiota composition correlates with diet and health in the elderly.

Authors:  Marcus J Claesson; Ian B Jeffery; Susana Conde; Susan E Power; Eibhlís M O'Connor; Siobhán Cusack; Hugh M B Harris; Mairead Coakley; Bhuvaneswari Lakshminarayanan; Orla O'Sullivan; Gerald F Fitzgerald; Jennifer Deane; Michael O'Connor; Norma Harnedy; Kieran O'Connor; Denis O'Mahony; Douwe van Sinderen; Martina Wallace; Lorraine Brennan; Catherine Stanton; Julian R Marchesi; Anthony P Fitzgerald; Fergus Shanahan; Colin Hill; R Paul Ross; Paul W O'Toole
Journal:  Nature       Date:  2012-08-09       Impact factor: 49.962

4.  Enterotypes of the human gut microbiome.

Authors:  Manimozhiyan Arumugam; Jeroen Raes; Eric Pelletier; Denis Le Paslier; Takuji Yamada; Daniel R Mende; Gabriel R Fernandes; Julien Tap; Thomas Bruls; Jean-Michel Batto; Marcelo Bertalan; Natalia Borruel; Francesc Casellas; Leyden Fernandez; Laurent Gautier; Torben Hansen; Masahira Hattori; Tetsuya Hayashi; Michiel Kleerebezem; Ken Kurokawa; Marion Leclerc; Florence Levenez; Chaysavanh Manichanh; H Bjørn Nielsen; Trine Nielsen; Nicolas Pons; Julie Poulain; Junjie Qin; Thomas Sicheritz-Ponten; Sebastian Tims; David Torrents; Edgardo Ugarte; Erwin G Zoetendal; Jun Wang; Francisco Guarner; Oluf Pedersen; Willem M de Vos; Søren Brunak; Joel Doré; María Antolín; François Artiguenave; Hervé M Blottiere; Mathieu Almeida; Christian Brechot; Carlos Cara; Christian Chervaux; Antonella Cultrone; Christine Delorme; Gérard Denariaz; Rozenn Dervyn; Konrad U Foerstner; Carsten Friss; Maarten van de Guchte; Eric Guedon; Florence Haimet; Wolfgang Huber; Johan van Hylckama-Vlieg; Alexandre Jamet; Catherine Juste; Ghalia Kaci; Jan Knol; Omar Lakhdari; Severine Layec; Karine Le Roux; Emmanuelle Maguin; Alexandre Mérieux; Raquel Melo Minardi; Christine M'rini; Jean Muller; Raish Oozeer; Julian Parkhill; Pierre Renault; Maria Rescigno; Nicolas Sanchez; Shinichi Sunagawa; Antonio Torrejon; Keith Turner; Gaetana Vandemeulebrouck; Encarna Varela; Yohanan Winogradsky; Georg Zeller; Jean Weissenbach; S Dusko Ehrlich; Peer Bork
Journal:  Nature       Date:  2011-04-20       Impact factor: 49.962

Review 5.  Application of phylogenetic microarrays to interrogation of human microbiota.

Authors:  Oleg Paliy; Richard Agans
Journal:  FEMS Microbiol Ecol       Date:  2011-11-09       Impact factor: 4.194

6.  Interactions between commensal fungi and the C-type lectin receptor Dectin-1 influence colitis.

Authors:  Iliyan D Iliev; Vincent A Funari; Kent D Taylor; Quoclinh Nguyen; Christopher N Reyes; Samuel P Strom; Jordan Brown; Courtney A Becker; Phillip R Fleshner; Marla Dubinsky; Jerome I Rotter; Hanlin L Wang; Dermot P B McGovern; Gordon D Brown; David M Underhill
Journal:  Science       Date:  2012-06-06       Impact factor: 47.728

7.  Metagenomic study of the oral microbiota by Illumina high-throughput sequencing.

Authors:  Vladimir Lazarevic; Katrine Whiteson; Susan Huse; David Hernandez; Laurent Farinelli; Magne Osterås; Jacques Schrenzel; Patrice François
Journal:  J Microbiol Methods       Date:  2009-09-29       Impact factor: 2.363

8.  Molecular typing of fecal eukaryotic microbiota of human infants and their respective mothers.

Authors:  Prashant K Pandey; Jay Siddharth; Pankaj Verma; Ashish Bavdekar; Milind S Patole; Yogesh S Shouche
Journal:  J Biosci       Date:  2012-06       Impact factor: 1.826

9.  Linking long-term dietary patterns with gut microbial enterotypes.

Authors:  Gary D Wu; Jun Chen; Christian Hoffmann; Kyle Bittinger; Ying-Yu Chen; Sue A Keilbaugh; Meenakshi Bewtra; Dan Knights; William A Walters; Rob Knight; Rohini Sinha; Erin Gilroy; Kernika Gupta; Robert Baldassano; Lisa Nessel; Hongzhe Li; Frederic D Bushman; James D Lewis
Journal:  Science       Date:  2011-09-01       Impact factor: 47.728

10.  New insights into Blastocystis spp.: a potential link with irritable bowel syndrome.

Authors:  Philippe Poirier; Ivan Wawrzyniak; Christian P Vivarès; Frédéric Delbac; Hicham El Alaoui
Journal:  PLoS Pathog       Date:  2012-03-15       Impact factor: 6.823
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  28 in total

1.  Development and Application of a Blastocystis Subtype-Specific PCR Assay Reveals that Mixed-Subtype Infections Are Common in a Healthy Human Population.

Authors:  Pauline D Scanlan; Christen Rune Stensvold; Paul D Cotter
Journal:  Appl Environ Microbiol       Date:  2015-04-03       Impact factor: 4.792

Review 2.  Molecular testing for clinical diagnosis and epidemiological investigations of intestinal parasitic infections.

Authors:  Jaco J Verweij; C Rune Stensvold
Journal:  Clin Microbiol Rev       Date:  2014-04       Impact factor: 26.132

3.  Associations between common intestinal parasites and bacteria in humans as revealed by qPCR.

Authors:  L O'Brien Andersen; A B Karim; H M Roager; L K Vigsnæs; K A Krogfelt; T R Licht; C R Stensvold
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2016-05-26       Impact factor: 3.267

Review 4.  Blastocystis in Health and Disease: Are We Moving from a Clinical to a Public Health Perspective?

Authors:  Lee O'Brien Andersen; Christen Rune Stensvold
Journal:  J Clin Microbiol       Date:  2015-12-16       Impact factor: 5.948

5.  Blastocystis in Côte d'Ivoire: molecular identification and epidemiological data.

Authors:  R D'Alfonso; M Santoro; D Essi; A Monsia; Y Kaboré; C Glé; D Di Cave; R P Sorge; V Di Cristanziano; F Berrilli
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2017-07-04       Impact factor: 3.267

6.  Are Human Intestinal Eukaryotes Beneficial or Commensals?

Authors:  Julius Lukeš; Christen Rune Stensvold; Kateřina Jirků-Pomajbíková; Laura Wegener Parfrey
Journal:  PLoS Pathog       Date:  2015-08-13       Impact factor: 6.823

7.  Dysbiosis of fungal microbiota in the intestinal mucosa of patients with colorectal adenomas.

Authors:  Chunguang Luan; Lingling Xie; Xi Yang; Huifang Miao; Na Lv; Ruifen Zhang; Xue Xiao; Yongfei Hu; Yulan Liu; Na Wu; Yuanmin Zhu; Baoli Zhu
Journal:  Sci Rep       Date:  2015-01-23       Impact factor: 4.379

Review 8.  The Road to Metagenomics: From Microbiology to DNA Sequencing Technologies and Bioinformatics.

Authors:  Alejandra Escobar-Zepeda; Arturo Vera-Ponce de León; Alejandro Sanchez-Flores
Journal:  Front Genet       Date:  2015-12-17       Impact factor: 4.599

9.  Blastocystis: Genetic diversity and molecular methods for diagnosis and epidemiology.

Authors:  Christen Rune Stensvold
Journal:  Trop Parasitol       Date:  2013-01

10.  Evaluating the impact of different sequence databases on metaproteome analysis: insights from a lab-assembled microbial mixture.

Authors:  Alessandro Tanca; Antonio Palomba; Massimo Deligios; Tiziana Cubeddu; Cristina Fraumene; Grazia Biosa; Daniela Pagnozzi; Maria Filippa Addis; Sergio Uzzau
Journal:  PLoS One       Date:  2013-12-09       Impact factor: 3.240
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