| Literature DB >> 23399876 |
Vijayanand Chandrasekaran1, Katharina Kolbe, Femke Beiroth, Thisbe K Lindhorst.
Abstract
In order to allow spatial and temporal control of carbohydrate-specific bacterial adhesion, it has become our goal to synthesiseEntities:
Keywords: E/Z photoisomerisation; FimH antagonists; azobenzene glycosides; bacterial adhesion; mannobiosides; molecular switches; sweet switches
Year: 2013 PMID: 23399876 PMCID: PMC3566865 DOI: 10.3762/bjoc.9.26
Source DB: PubMed Journal: Beilstein J Org Chem ISSN: 1860-5397 Impact factor: 2.883
Figure 1The α-(1→3)-linked mannobioside α-D-Man-(1→3)-D-Man 1 (B) is a potent disaccharide ligand for the bacterial lectin FimH and can thus inhibit type 1 fimbriae-mediated bacterial adhesion to glycosylated surfaces (A). Introduction of an azobenzene aglycone moiety turns glycoside 1 into a putative photoswitchable antagonist 2 of mannose-specific bacterial adhesion, displaying an (E)-, as well as a (Z)-form (C). In a future perspective azobenzene glycosides such as 2 can be further functionalised to be attached to oligofunctional core molecules or immobilised on surfaces (D).
Scheme 1Synthesis of azobenzene mannoside 6 and azobenzene mannobioside 2 by glycosylation.
Characterisation of the (E)- and (Z)-isomers of azobenzene glycosides 6 and 2.
| azobenzene glycoside | H-1 (ppm) | H-1 (ppm) | UV–vis | half-life, τ1/2 (h) | ||
| 99:1 | 3:97 | 5.54b | 5.34b | 347, 440c | 89 | |
| 95:5 | 4:96 | 5.65d | 5.52d | 339, 429e | 178.5 | |
aaccording to the integration ratio of H-1(E) and H-1(Z) in the 1H NMR spectrum;
b10 mM concentration in DMSO-d6;
c50 µM concentration in DMSO;
d8 mM concentration in D2O;
e65 µM concentration in H2O.
Inhibition of adhesion of E. coli to a mannan-coated surface. The inhibitory potencies of (E)- and (Z)-2 are compared to the standard inhibitors MeMan and pNPMan. a
| MeMan | ( | ( | ||
| IC50 ± SD (mM) | 5.205 ± 0.416 | 0.064 ± 0.018 | 0.073 ± 0.001 | |
| 0.073 ± 0.003 | 0.078 ± 0.006 | 0.084 ± 0.002 | ||
| RIP (MeMan) ± SD | IP ≡ 1 | 81 ± 25 | 71 ± 1 | |
| RIP ( | IP ≡ 1 | 0.94 ± 0.07 | 0.87 ± 0.02 | |
aAverage values from duplicate results; SD: standard deviation (from one assay); RIP: relative inhibitory potency referenced to either MeMan or pNPMan, each tested on the same microtiter plate.
FlexX scoring values for the (E)- and the (Z)-isomer of 2 based on two different crystal structures in comparison to MeMan and pNPMan.
| Ligand | “open-gate” structure [ | “closed-gate” structure [ |
| MeMan | −22.5 | −23.3 |
| −24.9 | −27.4 | |
| ( | −28.8 | −20.4 |
| ( | −28.7 | −21.6 |
Figure 2Connolly [32–33] descriptions of the FimH CRD with the docked azobenzene mannobioside 2. Top: (E)-isomer (A, closed-gate; B, open-gate conformation). Bottom: (Z)-isomer (C, closed-gate; D, open-gate conformation).