Literature DB >> 23396985

From the periphery to centre stage: de novo single nucleotide variants play a key role in human genetic disease.

Chee-Seng Ku1, Eng King Tan, David N Cooper.   

Abstract

Human germline mutations arise anew during meiosis in every generation. Such spontaneously occurring genetic variants are termed de novo mutations. Although the introduction of microarray based approaches led to the discovery of numerous de novo copy number variants underlying a range of human genetic conditions, de novo single nucleotide variants (SNVs) remained refractory to analysis at the whole genome level until the advent of next generation sequencing technologies such as whole genome sequencing and whole exome sequencing. These approaches have recently allowed the estimation of the mutation rate of de novo SNVs and greatly increased our understanding of their contribution to human genetic disease. Indeed, de novo SNVs have been found to underlie various common human neurodevelopmental conditions such as schizophrenia, autism and intellectual disability, as well as sporadic cases of rare Mendelian disorders. In many cases, however, confirmation of the pathogenicity of identified de novo SNVs remains a major challenge.

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Year:  2013        PMID: 23396985     DOI: 10.1136/jmedgenet-2013-101519

Source DB:  PubMed          Journal:  J Med Genet        ISSN: 0022-2593            Impact factor:   6.318


  13 in total

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Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2016-01-29       Impact factor: 3.568

5.  Guidelines for genetic studies in single patients: lessons from primary immunodeficiencies.

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6.  Amplicon Resequencing Identified Parental Mosaicism for Approximately 10% of "de novo" SCN1A Mutations in Children with Dravet Syndrome.

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Journal:  Hum Mutat       Date:  2015-07-24       Impact factor: 4.878

7.  Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequencing applications.

Authors:  Andy Rimmer; Hang Phan; Iain Mathieson; Zamin Iqbal; Stephen R F Twigg; Andrew O M Wilkie; Gil McVean; Gerton Lunter
Journal:  Nat Genet       Date:  2014-07-13       Impact factor: 38.330

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Authors:  Praveen F Cherukuri; Valerie Maduro; Karin V Fuentes-Fajardo; Kevin Lam; David R Adams; Cynthia J Tifft; James C Mullikin; William A Gahl; Cornelius F Boerkoel
Journal:  BMC Genomics       Date:  2015-11-25       Impact factor: 3.969

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Journal:  Orphanet J Rare Dis       Date:  2013-08-07       Impact factor: 4.123

10.  Identification of a de novo DYNC1H1 mutation via WES according to published guidelines.

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Journal:  Sci Rep       Date:  2016-02-05       Impact factor: 4.379

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