Literature DB >> 23391737

Animals in a bacterial world, a new imperative for the life sciences.

Margaret McFall-Ngai1, Michael G Hadfield, Thomas C G Bosch, Hannah V Carey, Tomislav Domazet-Lošo, Angela E Douglas, Nicole Dubilier, Gerard Eberl, Tadashi Fukami, Scott F Gilbert, Ute Hentschel, Nicole King, Staffan Kjelleberg, Andrew H Knoll, Natacha Kremer, Sarkis K Mazmanian, Jessica L Metcalf, Kenneth Nealson, Naomi E Pierce, John F Rawls, Ann Reid, Edward G Ruby, Mary Rumpho, Jon G Sanders, Diethard Tautz, Jennifer J Wernegreen.   

Abstract

In the last two decades, the widespread application of genetic and genomic approaches has revealed a bacterial world astonishing in its ubiquity and diversity. This review examines how a growing knowledge of the vast range of animal-bacterial interactions, whether in shared ecosystems or intimate symbioses, is fundamentally altering our understanding of animal biology. Specifically, we highlight recent technological and intellectual advances that have changed our thinking about five questions: how have bacteria facilitated the origin and evolution of animals; how do animals and bacteria affect each other's genomes; how does normal animal development depend on bacterial partners; how is homeostasis maintained between animals and their symbionts; and how can ecological approaches deepen our understanding of the multiple levels of animal-bacterial interaction. As answers to these fundamental questions emerge, all biologists will be challenged to broaden their appreciation of these interactions and to include investigations of the relationships between and among bacteria and their animal partners as we seek a better understanding of the natural world.

Mesh:

Year:  2013        PMID: 23391737      PMCID: PMC3587249          DOI: 10.1073/pnas.1218525110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  102 in total

1.  Ecology drives a global network of gene exchange connecting the human microbiome.

Authors:  Chris S Smillie; Mark B Smith; Jonathan Friedman; Otto X Cordero; Lawrence A David; Eric J Alm
Journal:  Nature       Date:  2011-10-30       Impact factor: 49.962

Review 2.  Host-gut microbiota metabolic interactions.

Authors:  Jeremy K Nicholson; Elaine Holmes; James Kinross; Remy Burcelin; Glenn Gibson; Wei Jia; Sven Pettersson
Journal:  Science       Date:  2012-06-06       Impact factor: 47.728

Review 3.  Sociomicrobiology: the connections between quorum sensing and biofilms.

Authors:  Matthew R Parsek; E P Greenberg
Journal:  Trends Microbiol       Date:  2005-01       Impact factor: 17.079

4.  FoxO is a critical regulator of stem cell maintenance in immortal Hydra.

Authors:  Anna-Marei Boehm; Konstantin Khalturin; Friederike Anton-Erxleben; Georg Hemmrich; Ulrich C Klostermeier; Javier A Lopez-Quintero; Hans-Heinrich Oberg; Malte Puchert; Philip Rosenstiel; Jörg Wittlieb; Thomas C G Bosch
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-12       Impact factor: 11.205

5.  Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns.

Authors:  Maria G Dominguez-Bello; Elizabeth K Costello; Monica Contreras; Magda Magris; Glida Hidalgo; Noah Fierer; Rob Knight
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-21       Impact factor: 11.205

6.  The gut microbiota as an environmental factor that regulates fat storage.

Authors:  Fredrik Bäckhed; Hao Ding; Ting Wang; Lora V Hooper; Gou Young Koh; Andras Nagy; Clay F Semenkovich; Jeffrey I Gordon
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-25       Impact factor: 11.205

7.  H-NOX-mediated nitric oxide sensing modulates symbiotic colonization by Vibrio fischeri.

Authors:  Yanling Wang; Yann S Dufour; Hans K Carlson; Timothy J Donohue; Michael A Marletta; Edward G Ruby
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-19       Impact factor: 11.205

8.  Autocrine and paracrine unpaired signaling regulate intestinal stem cell maintenance and division.

Authors:  Dani Osman; Nicolas Buchon; Sveta Chakrabarti; Yu-Ting Huang; Wan-Chi Su; Mickaël Poidevin; Yu-Chen Tsai; Bruno Lemaitre
Journal:  J Cell Sci       Date:  2012-10-04       Impact factor: 5.285

9.  Lymphoid tissue genesis induced by commensals through NOD1 regulates intestinal homeostasis.

Authors:  Djahida Bouskra; Christophe Brézillon; Marion Bérard; Catherine Werts; Rosa Varona; Ivo Gomperts Boneca; Gérard Eberl
Journal:  Nature       Date:  2008-11-05       Impact factor: 49.962

10.  Innate immune homeostasis by the homeobox gene caudal and commensal-gut mutualism in Drosophila.

Authors:  Ji-Hwan Ryu; Sung-Hee Kim; Hyo-Young Lee; Jin Young Bai; Young-Do Nam; Jin-Woo Bae; Dong Gun Lee; Seung Chul Shin; Eun-Mi Ha; Won-Jae Lee
Journal:  Science       Date:  2008-01-24       Impact factor: 47.728

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  752 in total

1.  The Lizard Gut Microbiome Changes with Temperature and Is Associated with Heat Tolerance.

Authors:  Andrew H Moeller; Kathleen Ivey; Margaret B Cornwall; Kathryn Herr; Jordan Rede; Emily N Taylor; Alex R Gunderson
Journal:  Appl Environ Microbiol       Date:  2020-08-18       Impact factor: 4.792

2.  Individual and Site-Specific Variation in a Biogeographical Profile of the Coyote Gastrointestinal Microbiota.

Authors:  Scott Sugden; Colleen Cassady St Clair; Lisa Y Stein
Journal:  Microb Ecol       Date:  2020-06-27       Impact factor: 4.552

3.  Abundant toxin-related genes in the genomes of beneficial symbionts from deep-sea hydrothermal vent mussels.

Authors:  Lizbeth Sayavedra; Manuel Kleiner; Ruby Ponnudurai; Silke Wetzel; Eric Pelletier; Valerie Barbe; Nori Satoh; Eiichi Shoguchi; Dennis Fink; Corinna Breusing; Thorsten Bh Reusch; Philip Rosenstiel; Markus B Schilhabel; Dörte Becher; Thomas Schweder; Stephanie Markert; Nicole Dubilier; Jillian M Petersen
Journal:  Elife       Date:  2015-09-15       Impact factor: 8.140

Review 4.  Animal-microbe interactions and the evolution of nervous systems.

Authors:  Heather L Eisthen; Kevin R Theis
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-01-05       Impact factor: 6.237

5.  Evolutionary and ecological consequences of gut microbial communities.

Authors:  Nancy A Moran; Howard Ochman; Tobin J Hammer
Journal:  Annu Rev Ecol Evol Syst       Date:  2019-08-29       Impact factor: 13.915

6.  Skin Bacterial Community Reorganization Following Metamorphosis of the Fire-Bellied Toad (Bombina orientalis).

Authors:  Arnaud Bataille; Larisa Lee-Cruz; Binu Tripathi; Bruce Waldman
Journal:  Microb Ecol       Date:  2017-07-19       Impact factor: 4.552

Review 7.  A conserved chemical dialog of mutualism: lessons from squid and vibrio.

Authors:  Julia A Schwartzman; Edward G Ruby
Journal:  Microbes Infect       Date:  2015-09-15       Impact factor: 2.700

Review 8.  The oxidative environment: a mediator of interspecies communication that drives symbiosis evolution.

Authors:  Yves Moné; David Monnin; Natacha Kremer
Journal:  Proc Biol Sci       Date:  2014-05-07       Impact factor: 5.349

9.  Symbiotic bacteria appear to mediate hyena social odors.

Authors:  Kevin R Theis; Arvind Venkataraman; Jacquelyn A Dycus; Keith D Koonter; Emily N Schmitt-Matzen; Aaron P Wagner; Kay E Holekamp; Thomas M Schmidt
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-11       Impact factor: 11.205

10.  Laying date, incubation and egg breakage as determinants of bacterial load on bird eggshells: experimental evidence.

Authors:  Juan José Soler; Magdalena Ruiz-Rodríguez; Manuel Martín-Vivaldi; Juan Manuel Peralta-Sánchez; Cristina Ruiz-Castellano; Gustavo Tomás
Journal:  Oecologia       Date:  2015-04-26       Impact factor: 3.225

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