| Literature DB >> 23389090 |
Anna Maciejewska1, Jolanta Lukasiewicz, Marta Kaszowska, Aleksandra Man-Kupisinska, Wojciech Jachymek, Czeslaw Lugowski.
Abstract
The herein presented complete structure of the core oligosaccharide of lipopolysaccharide (LPS) P. shigelloides Polish Collection of Microorganisms (PCM) 2231 (serotype O17) was investigated by (1)H, (13)C NMR spectroscopy, mass spectrometry, chemical analyses and serological methods. The core oligosaccharide is composed of an undecasaccharide, which represents the second core type identified for P. shigelloides serotype O17 LPS. This structure is similar to that of the core oligosaccharide of P. shigelloides strains 302-73 (serotype O1) and 7-63 (serotype O17) and differs from these only by one sugar residue. Serological screening of 55 strains of P. shigelloides with the use of serum against identified core oligosaccharide conjugated with bovine serum albumin (BSA) indicated the presence of similar structures in the LPS core region of 28 O-serotypes. This observation suggests that the core oligosaccharide structure present in strain PCM 2231 could be the most common type among P. shigelloides lipopolysaccharides.Entities:
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Year: 2013 PMID: 23389090 PMCID: PMC3640391 DOI: 10.3390/md11020440
Source DB: PubMed Journal: Mar Drugs ISSN: 1660-3397 Impact factor: 5.118
Figure 1MALDI-TOF mass spectra of the core oligosaccharides OSII (A), OSI (B) and fraction PSV (C) isolated from LPS of P. shigelloides PCM 2231 (serotype O17). Complete structure of the core OS substituted with one RU of the O-specific PS was presented as the inset structure with marked OSII, OSI and PSV fractions. Heterogeneity related residues are marked with asterisk. Spectra were obtained in the negative reflectron mode with 2,4,6-trihydroxyacetophenone as a matrix. m/z values represent monoisotopic masses.
1H and 13C NMR chemical shifts of the core oligosaccharide substituted with one RU of the O-specific PS of P. shigelloides PCM 2231 LPS (serotyp O17) (fraction PSV). Spectra were recorded for 2H2O solution at 27 °C. Acetone (δH 2.225, δC 31.05 ppm) was used as internal reference.
| Residue | Chemical shifts (ppm) | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| H-1 | H-2 | H-3a,b | H-4 | H-5 | H-6a,b | H-7a,b | H-8a,b | ||
| C-1 | C-2 | C-3 | C-4 | C-5 | C-6 | C-7 | C-8, CH3CO | ||
| A | →4)-α-
| 5.33 | 3.83 | 4.25 | 4.36 | 4.53 | |||
| 102.1 | 69.2 | 69.0 | 80.1 | 72.3 | 175.6 | ||||
| A′ | →4)-α-
| 5.40 | 3.84 | 4.22 | 4.41 | 4.60 | |||
| 102.4 | 69.3 | 69.0 | 80.6 | 72.5 | 175.6 | ||||
| B | α-
| 5.24 | 3.22 | 3.91 | 3.50 | 4.11 | 3.81 a | ||
| 95.1 | 55.0 | 70.3 | 70.0 | 73.0 | 60.7 | ||||
| C | →6)-α- | 5.12 | 3.26 | 3.86 | 3.47 | 4.33 | 3.79, 4.08 | ||
| 97.0 | 54.9 | 70.3 | 70.0 | 71.6 | 68.6 | ||||
| D | →3,4)- | 5.11 | 4.04 | 4.13 | 4.23 | 4.17 | 4.17 | 3.72 b | |
| 101.3 | 71.1 | 75.3 | 75.1 | 72.0 | 69.2 | 63.8 | |||
| E | →4)-α- | 5.02 | 3.95 | 4.07 | 4.52 | 4.31 | |||
| 99.7 | 68.8 | 69.7 | 77.3 | 70.6 | 176.5 | ||||
| F | →7)- | 4.88 | 4.00 | 3.84 | 3.89 | 3.60 | 4.21 | 3.58, 3.82 | |
| 103.2 | 70.9 | 71.2 | 66.7 | 73.2 | 68.4 | 72.0 | |||
| G | β- | 4.59 | 3.22 | 3.51 | 3.45 | 3.59 | 3.78, 3.90 | ||
| 103.5 | 74.0 | 75.4 | 69.9 | 76.2 | 61.3 | ||||
| H | β-d-Gal | 4.51 | 3.50 | 3.62 | 3.95 | 3.66 | 3.69-3.74 b | ||
| 104.2 | 72.2 | 73.1 | 71.0 | 75.8 | 62.6 | ||||
| H′ | β-d-Gal | 4.45 | 3.55 | 3.64 | 3.91 | 3.64 | 3.69-3.74 b | ||
| 104.1 | 71.7 | 73.2 | 69.6 | 76.0 | 62.6 | ||||
| K | →5)-Kdo | 1.86, 2.22 | 4.12 | 4.13 | 3.70 | 3.86 | 3.60, 3.84 | ||
| nd | nd | 34.4 | 66.4 | 75.3 | 70.0 | 72.1 | 64.1 | ||
| L | →3,7)- | 5.28 | 4.18 | 3.99 | 4.01 | 3.60 | 4.14 | 3.55, 3.95 | |
| 101.8 | 70.2 | 81.9 | 65.6 | 73.2 | 69.1 | 73.5 | |||
| L′ | →2,3,7)- | 5.38 | 4.22 | 4.10 | 4.04 | 3.60 | 4.14 | 3.56, 3.94 | |
| 99.7 | 78.9 | 79.3 | 66.4 | 73.2 | 69.1 | 73.6 | |||
| M | →3)-β-d-Fuc | 4.57 | 3.83 | 4.16 | 3.98 | 4.09 | 1.32 | 2.07 | |
| 101.9 | 51.6 | 76.5 | 55.4 | 68.1 | 16.3 | 23.0, 174.7 | |||
| N | →4)-β- | 4.48 | 3.75 | 3.68 | 3.65 | 3.49 | 3.63, 3.82 | 2.06 | |
| 102.2 | 55.9 | 73.0 | 79.1 | 75.3 | 60.8 | 23.0, 175.4 | |||
| O | α-l-Alt | 4.88 | 3.97 | 3.66 | 4.38 | 4.41 | 2.00 | ||
| 101.7 | 52.2 | 68.8 | 69.9 | 78.7 | 175.4 | 23.0, 175.3 | |||
a, b Not resolved; nd: Not determined.
Figure 2.600 MHz HSQC-DEPT spectrum of the core OS substituted with one RU of the O-specific PS of P. shigelloides PCM 2231 (serotype O17) (fraction PSV). The inset shows the anomeric region of the spectrum. The uppercase letters refer to designations of carbohydrate residues. The spectra were obtained for 2H2O suspensions at 27 °C.
Selected 3JH,C-connectivities from the anomeric atoms of the core OS substituted with one RU of the O-specific PS of P. shigelloides PCM 2231 LPS (serotype O17).
| Residue | Atom H-1/C-1 (ppm) | Connectivities to | Inter-Residue atom/residue | ||
|---|---|---|---|---|---|
| δH | δC | ||||
| A | →4)-α- | 5.33/102.1 | 3.99 | nd | H-3 of
|
| B | α- | 5.24/95.1 | 4.52 | nd | H-4 of
|
| C | →6)-α- | 5.12/97.0 | 4.36 | 80.1 | H-4, C-4 of
|
| D | →3,4)- | 5.11/101.3 | 4.13 | 75.3 | H-5, C-5 of
|
| E | →4)-α- | 5.02/99.7 | 3.58 | 71.9 | H-7a, C-7 of
|
| F | →7)- | 4.88/103.2 | 3.95 | 73.5 | H-7b, C-7 of
|
| G | β- | 4.59/103.5 | nd | 78.9 | C-2 of
|
| H | β- | 4.51/104.2 | 4.23 | 75.1 | H-4, C-4 of
|
| L | →3,7)- | 5.28/101.2 | 4.13 | 75.3 | H-3, C-3 of
|
| M | →3)-β- | 4.57/101.9 | 3.65 | 79.1 | H-4, C-4 of
|
| N | →4)-β- | 4.48/102.2 | 3.79, 4.08 | 68.6 | H-6a, H-6b, C-6 of
|
| O | α-l-Alt | 4.88/101.7 | 4.16 | 76.5 | H-3, C-3 of
|
nd: Not determined.
Figure 3LPSs were analysed by SDS-PAGE (3 μg/lane), using a 15% separating gel, and visualized by the silver staining method (A). Reactivities of serum (200-fold diluted) against the OSI-BSA conjugate with P. shigelloides LPSs in immunoblotting (B).