Literature DB >> 23387555

The G-quadruplex augments translation in the 5' untranslated region of transforming growth factor β2.

Prachi Agarwala1, Satyaprakash Pandey, Koyeli Mapa, Souvik Maiti.   

Abstract

Transforming growth factor β2 (TGFβ2) is a versatile cytokine with a prominent role in cell migration, invasion, cellular development, and immunomodulation. TGFβ2 promotes the malignancy of tumors by inducing epithelial-mesenchymal transition, angiogenesis, and immunosuppression. As it is well-documented that nucleic acid secondary structure can regulate gene expression, we assessed whether any secondary motif regulates its expression at the post-transcriptional level. Bioinformatics analysis predicts an existence of a 23-nucleotide putative G-quadruplex sequence (PG4) in the 5' untranslated region (UTR) of TGFβ2 mRNA. The ability of this stretch of sequence to form a highly stable, intramolecular parallel quadruplex was demonstrated using ultraviolet and circular dichroism spectroscopy. Footprinting studies further validated its existence in the presence of a neighboring nucleotide sequence. Following structural characterization, we evaluated the biological relevance of this secondary motif using a dual luciferase assay. Although PG4 inhibits the expression of the reporter gene, its presence in the context of the entire 5' UTR sequence interestingly enhances gene expression. Mutation or removal of the G-quadruplex sequence from the 5' UTR of the gene diminished the level of expression of this gene at the translational level. Thus, here we highlight an activating role of the G-quadruplex in modulating gene expression of TGFβ2 at the translational level and its potential to be used as a target for the development of therapeutics against cancer.

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Year:  2013        PMID: 23387555     DOI: 10.1021/bi301365g

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  25 in total

1.  Fragile X mental retardation protein recognizes a G quadruplex structure within the survival motor neuron domain containing 1 mRNA 5'-UTR.

Authors:  Damian S McAninch; Ashley M Heinaman; Cara N Lang; Kathryn R Moss; Gary J Bassell; Mihaela Rita Mihailescu; Timothy L Evans
Journal:  Mol Biosyst       Date:  2017-07-25

2.  Impact of G-quadruplex structures and intronic polymorphisms rs17878362 and rs1642785 on basal and ionizing radiation-induced expression of alternative p53 transcripts.

Authors:  Laury Perriaud; Virginie Marcel; Charlotte Sagne; Vincent Favaudon; Aurore Guédin; Aurore De Rache; Corinne Guetta; Florian Hamon; Marie-Paule Teulade-Fichou; Pierre Hainaut; Jean-Louis Mergny; Janet Hall
Journal:  Carcinogenesis       Date:  2014-09-30       Impact factor: 4.944

3.  G-Quadruplex in the NRF2 mRNA 5' Untranslated Region Regulates De Novo NRF2 Protein Translation under Oxidative Stress.

Authors:  Sang C Lee; Jack Zhang; Josh Strom; Danzhou Yang; Thai Nho Dinh; Kyle Kappeler; Qin M Chen
Journal:  Mol Cell Biol       Date:  2016-12-19       Impact factor: 4.272

4.  High-throughput characterization of the role of non-B DNA motifs on promoter function.

Authors:  Ilias Georgakopoulos-Soares; Jesus Victorino; Guillermo E Parada; Vikram Agarwal; Jingjing Zhao; Hei Yuen Wong; Mubarak Ishaq Umar; Orry Elor; Allan Muhwezi; Joon-Yong An; Stephan J Sanders; Chun Kit Kwok; Fumitaka Inoue; Martin Hemberg; Nadav Ahituv
Journal:  Cell Genom       Date:  2022-03-15

5.  Alternatively spliced variants of the 5'-UTR of the ARPC2 mRNA regulate translation by an internal ribosome entry site (IRES) harboring a guanine-quadruplex motif.

Authors:  Munir A Al-Zeer; Mariola Dutkiewicz; Annekathrin von Hacht; Denise Kreuzmann; Viola Röhrs; Jens Kurreck
Journal:  RNA Biol       Date:  2019-08-14       Impact factor: 4.652

Review 6.  The regulation and functions of DNA and RNA G-quadruplexes.

Authors:  Dhaval Varshney; Jochen Spiegel; Katherine Zyner; David Tannahill; Shankar Balasubramanian
Journal:  Nat Rev Mol Cell Biol       Date:  2020-04-20       Impact factor: 94.444

7.  Grsf1-induced translation of the SNARE protein Use1 is required for expansion of the erythroid compartment.

Authors:  Andrzej Nieradka; Christoph Ufer; Klaske Thiadens; Godfrey Grech; Rastislav Horos; Marleen van Coevorden-Hameete; Emile van den Akker; Sajad Sofi; Hartmut Kuhn; Marieke von Lindern
Journal:  PLoS One       Date:  2014-09-03       Impact factor: 3.240

8.  Visualization and selective chemical targeting of RNA G-quadruplex structures in the cytoplasm of human cells.

Authors:  Giulia Biffi; Marco Di Antonio; David Tannahill; Shankar Balasubramanian
Journal:  Nat Chem       Date:  2013-11-24       Impact factor: 24.427

9.  CNBP Binds and Unfolds In Vitro G-Quadruplexes Formed in the SARS-CoV-2 Positive and Negative Genome Strands.

Authors:  Georgina Bezzi; Ernesto J Piga; Andrés Binolfi; Pablo Armas
Journal:  Int J Mol Sci       Date:  2021-03-05       Impact factor: 5.923

10.  Identification and characterization of RNA guanine-quadruplex binding proteins.

Authors:  Annekathrin von Hacht; Oliver Seifert; Marcus Menger; Tatjana Schütze; Amit Arora; Zoltán Konthur; Peter Neubauer; Anke Wagner; Christoph Weise; Jens Kurreck
Journal:  Nucleic Acids Res       Date:  2014-04-25       Impact factor: 16.971

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