Literature DB >> 23385594

Electronic signature of the instantaneous asymmetry in the first coordination shell of liquid water.

Thomas D Kühne1, Rustam Z Khaliullin.   

Abstract

Interpretation of the X-ray spectra of water as evidence for its asymmetric structure has challenged the conventional symmetric nearly tetrahedral model and initiated an intense debate about the order and symmetry of the hydrogen-bond network in water. Here we present new insights into the nature of local interactions in water obtained using a novel energy-decomposition method. Our simulations reveal that although a water molecule forms, on average, two strong donor and two strong acceptor bonds, there is a significant asymmetry in the energy of these contacts. We demonstrate that this asymmetry is a result of small instantaneous distortions of hydrogen bonds, which appear as fluctuations on a time scale of hundreds of femtoseconds around the average symmetric structure. Furthermore, we show that the distinct features of the X-ray absorption spectra originate from molecules with high instantaneous asymmetry. Our findings have important implications as they help reconcile the symmetric and asymmetric views on the structure of water.

Entities:  

Year:  2013        PMID: 23385594     DOI: 10.1038/ncomms2459

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  37 in total

1.  Charge-transfer and the hydrogen bond: spectroscopic and structural implications from electronic structure calculations.

Authors:  Eloy Ramos-Cordoba; Daniel S Lambrecht; Martin Head-Gordon
Journal:  Faraday Discuss       Date:  2011       Impact factor: 4.008

2.  Unified description of temperature-dependent hydrogen-bond rearrangements in liquid water.

Authors:  Jared D Smith; Christopher D Cappa; Kevin R Wilson; Ronald C Cohen; Phillip L Geissler; Richard J Saykally
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-22       Impact factor: 11.205

3.  Tetrahedral structure or chains for liquid water.

Authors:  Teresa Head-Gordon; Margaret E Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-12       Impact factor: 11.205

4.  Probing the local structure of liquid water by X-ray absorption spectroscopy.

Authors:  Jared D Smith; Christopher D Cappa; Benjamin M Messer; Walter S Drisdell; Ronald C Cohen; Richard J Saykally
Journal:  J Phys Chem B       Date:  2006-10-12       Impact factor: 2.991

5.  Efficient and accurate Car-Parrinello-like approach to Born-Oppenheimer molecular dynamics.

Authors:  Thomas D Kühne; Matthias Krack; Fawzi R Mohamed; Michele Parrinello
Journal:  Phys Rev Lett       Date:  2007-02-05       Impact factor: 9.161

6.  Gaussian basis sets for accurate calculations on molecular systems in gas and condensed phases.

Authors:  Joost VandeVondele; Jürg Hutter
Journal:  J Chem Phys       Date:  2007-09-21       Impact factor: 3.488

7.  Inner-shell spectroscopy by the Gaussian and augmented plane wave method.

Authors:  Marcella Iannuzzi; Jürg Hutter
Journal:  Phys Chem Chem Phys       Date:  2007-02-16       Impact factor: 3.676

8.  Analysis of charge transfer effects in molecular complexes based on absolutely localized molecular orbitals.

Authors:  Rustam Z Khaliullin; Alexis T Bell; Martin Head-Gordon
Journal:  J Chem Phys       Date:  2008-05-14       Impact factor: 3.488

9.  Assessment of the performance of common density functional methods for describing the interaction energies of (H2O)6 clusters.

Authors:  F-F Wang; G Jenness; W A Al-Saidi; K D Jordan
Journal:  J Chem Phys       Date:  2010-04-07       Impact factor: 3.488

10.  Hydrogen bonds in liquid water are broken only fleetingly.

Authors:  J D Eaves; J J Loparo; C J Fecko; S T Roberts; A Tokmakoff; P L Geissler
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-31       Impact factor: 11.205

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  20 in total

1.  The nano-structural inhomogeneity of dynamic hydrogen bond network of TIP4P/2005 water.

Authors:  Vladimir Belosludov; Kirill Gets; Ravil Zhdanov; Valery Malinovsky; Yulia Bozhko; Rodion Belosludov; Nikolay Surovtsev; Oleg Subbotin; Yoshiyuki Kawazoe
Journal:  Sci Rep       Date:  2020-04-30       Impact factor: 4.379

2.  Two-dimensional Raman-terahertz spectroscopy of water.

Authors:  Janne Savolainen; Saima Ahmed; Peter Hamm
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-02       Impact factor: 11.205

3.  Nuclear quantum effects and hydrogen bond fluctuations in water.

Authors:  Michele Ceriotti; Jérôme Cuny; Michele Parrinello; David E Manolopoulos
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-06       Impact factor: 11.205

4.  The hidden structure of liquids.

Authors:  Philip Ball
Journal:  Nat Mater       Date:  2014-08       Impact factor: 43.841

5.  Water: A Tale of Two Liquids.

Authors:  Paola Gallo; Katrin Amann-Winkel; Charles Austen Angell; Mikhail Alexeevich Anisimov; Frédéric Caupin; Charusita Chakravarty; Erik Lascaris; Thomas Loerting; Athanassios Zois Panagiotopoulos; John Russo; Jonas Alexander Sellberg; Harry Eugene Stanley; Hajime Tanaka; Carlos Vega; Limei Xu; Lars Gunnar Moody Pettersson
Journal:  Chem Rev       Date:  2016-07-05       Impact factor: 60.622

Review 6.  Limitations and extensions of the lock-and-key principle: differences between gas state, solution and solid state structures.

Authors:  Hans-Jörg Schneider
Journal:  Int J Mol Sci       Date:  2015-03-25       Impact factor: 5.923

7.  Rational design of a new Trypanosoma rangeli trans-sialidase for efficient sialylation of glycans.

Authors:  Carsten Jers; Malwina Michalak; Dorte M Larsen; Kasper P Kepp; Haiying Li; Yao Guo; Finn Kirpekar; Anne S Meyer; Jørn D Mikkelsen
Journal:  PLoS One       Date:  2014-01-03       Impact factor: 3.240

8.  High pressure Raman spectroscopy of H2O-CH3OH mixtures.

Authors:  Wen-Pin Hsieh; Yu-Hsiang Chien
Journal:  Sci Rep       Date:  2015-02-23       Impact factor: 4.379

9.  Size, separation, structural order, and mass density of molecules packing in water and ice.

Authors:  Yongli Huang; Xi Zhang; Zengsheng Ma; Wen Li; Yichun Zhou; Ji Zhou; Weitao Zheng; Chang Q Sun
Journal:  Sci Rep       Date:  2013-10-21       Impact factor: 4.379

10.  Water dynamics: relation between hydrogen bond bifurcations, molecular jumps, local density & hydrophobicity.

Authors:  John Tatini Titantah; Mikko Karttunen
Journal:  Sci Rep       Date:  2013-10-21       Impact factor: 4.379

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