Literature DB >> 23376211

New insights toward the discovery of antibacterial agents: multi-tasking QSBER model for the simultaneous prediction of anti-tuberculosis activity and toxicological profiles of drugs.

Alejandro Speck-Planche1, Valeria V Kleandrova, M Natália D S Cordeiro.   

Abstract

Tuberculosis (TB) constitutes one of the most dangerous and serious health problems around the world. It is a very lethal disease caused by microorganisms of the genus mycobacterium, principally Mycobacterium tuberculosis (MTB) which affects humans. A very active field for the search of more efficient anti-TB chemotherapies is the use in silico methodologies for the discovery of potent anti-TB agents. The battle against MTB by using antimicrobial chemotherapies will depend on the design of new chemicals with high anti-TB activity and low toxicity as possible. Multi-target methodologies focused on quantitative-structure activity relationships (mt-QSAR) have played a very important role for the rationalization of drug design, providing a better understanding about the molecular patterns related with diverse pharmacological profiles including antimicrobial activity. Nowadays, almost all mt-QSAR models have considered the study of biological activity or toxicity separately. In the present study, we develop by the first time, a unified multitasking model based on quantitative-structure biological effect relationships (mtk-QSBER) for the simultaneous prediction of anti-TB activity and toxicity against Mus musculus and Rattus norvegicus. The mtk-QSBER model was created by using linear discriminant analysis (LDA) for the classification of compounds as positive (high biological activity and/or low toxicity) or negative (otherwise) under many experimental conditions. Our mtk-QSBER model, correctly classified more than 90% of the case in the whole database (more than 12,000 cases), serving as a powerful tool for the computer-assisted screening of potent and safe anti-TB drugs.
Copyright © 2013 Elsevier B.V. All rights reserved.

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Year:  2013        PMID: 23376211     DOI: 10.1016/j.ejps.2013.01.011

Source DB:  PubMed          Journal:  Eur J Pharm Sci        ISSN: 0928-0987            Impact factor:   4.384


  5 in total

1.  Machine-learning techniques applied to antibacterial drug discovery.

Authors:  Jacob D Durrant; Rommie E Amaro
Journal:  Chem Biol Drug Des       Date:  2015-01       Impact factor: 2.817

2.  Model for high-throughput screening of multitarget drugs in chemical neurosciences: synthesis, assay, and theoretic study of rasagiline carbamates.

Authors:  Nerea Alonso; Olga Caamaño; Francisco J Romero-Duran; Feng Luan; M Natália D S Cordeiro; Matilde Yañez; Humberto González-Díaz; Xerardo García-Mera
Journal:  ACS Chem Neurosci       Date:  2013-07-29       Impact factor: 4.418

Review 3.  Artificial intelligence and machine-learning approaches in structure and ligand-based discovery of drugs affecting central nervous system.

Authors:  Vertika Gautam; Anand Gaurav; Neeraj Masand; Vannajan Sanghiran Lee; Vaishali M Patil
Journal:  Mol Divers       Date:  2022-07-11       Impact factor: 3.364

4.  Prediction of QcrB Inhibition as a Measure of Antitubercular Activity with Machine Learning Protocols.

Authors:  Afreen A Khan; Sannidhi S Poojary; Ketki K Bhave; Santosh R Nandan; Krishna R Iyer; Evans C Coutinho
Journal:  ACS Omega       Date:  2022-05-19

5.  Model for vaccine design by prediction of B-epitopes of IEDB given perturbations in peptide sequence, in vivo process, experimental techniques, and source or host organisms.

Authors:  Humberto González-Díaz; Lázaro G Pérez-Montoto; Florencio M Ubeira
Journal:  J Immunol Res       Date:  2014-01-12       Impact factor: 4.818

  5 in total

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