Literature DB >> 23374188

Rhodopsin-lipid interactions studied by NMR.

Olivier Soubias1, Klaus Gawrisch.   

Abstract

The biophysical properties of the lipid matrix are known to influence function of integral membrane proteins. We report on a sample preparation method for reconstitution of membrane proteins which uses porous anodic aluminum oxide (AAO) filters with 200-nm-wide pores of high density. The substrate permits formation of tubular, single membranes that line the inner surface of pores. One square centimeter of filter with a thickness of 60μm yields on the order of 500cm(2) of solid-supported single bilayer surface, sufficient for NMR studies. The tubular bilayers are free of detergent, fully hydrated, and accessible for ligands from one side of the membrane. The use of AAO filters greatly improves reproducibility of the reconstitution process such that the influence of protein on lipid order parameters can be studied with high resolution. As an example, results for the G protein-coupled receptor of class A, bovine rhodopsin, are shown. By (2)H NMR order parameter measurements, it is detected that rhodopsin insertion elastically deforms membranes near the protein. Furthermore, by (1)H saturation-transfer NMR under conditions of magic angle spinning, we demonstrate detection of preferences in interactions of rhodopsin with particular lipid species. It is assumed that function of integral membrane proteins depends on both protein-induced elastic deformations of the lipid matrix and preferences for interaction of the protein with particular lipid species in the first layer of lipids surrounding the protein.
Copyright © 2013 Elsevier Inc. All rights reserved.

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Year:  2013        PMID: 23374188      PMCID: PMC3564507          DOI: 10.1016/B978-0-12-407865-9.00012-1

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  31 in total

1.  Simultaneous determination of orientational and order parameter distributions from NMR spectra of partially oriented model membranes.

Authors:  E Sternin; H Schäfer; I V Polozov; K Gawrisch
Journal:  J Magn Reson       Date:  2001-03       Impact factor: 2.229

2.  Crystal structure of rhodopsin: A G protein-coupled receptor.

Authors:  K Palczewski; T Kumasaka; T Hori; C A Behnke; H Motoshima; B A Fox; I Le Trong; D C Teller; T Okada; R E Stenkamp; M Yamamoto; M Miyano
Journal:  Science       Date:  2000-08-04       Impact factor: 47.728

3.  Determination of orientational order parameters from 2H NMR spectra of magnetically partially oriented lipid bilayers.

Authors:  H Schäfer; B Mädler; E Sternin
Journal:  Biophys J       Date:  1998-02       Impact factor: 4.033

4.  Area per lipid and acyl length distributions in fluid phosphatidylcholines determined by (2)H NMR spectroscopy.

Authors:  H I Petrache; S W Dodd; M F Brown
Journal:  Biophys J       Date:  2000-12       Impact factor: 4.033

5.  Group epitope mapping by saturation transfer difference NMR to identify segments of a ligand in direct contact with a protein receptor.

Authors:  M Mayer; B Meyer
Journal:  J Am Chem Soc       Date:  2001-06-27       Impact factor: 15.419

6.  Elastic properties of lipid bilayers: theory and possible experiments.

Authors:  W Helfrich
Journal:  Z Naturforsch C       Date:  1973 Nov-Dec       Impact factor: 1.649

7.  Conformational energetics of rhodopsin modulated by nonlamellar-forming lipids.

Authors:  Ana Vitória Botelho; Nicholas J Gibson; Robin L Thurmond; Yin Wang; Michael F Brown
Journal:  Biochemistry       Date:  2002-05-21       Impact factor: 3.162

8.  Deuterium order parameters in relation to thermodynamic properties of a phospholiped bilayer. A statistical mechanical interpretation.

Authors:  H Schindler; J Seelig
Journal:  Biochemistry       Date:  1975-06-03       Impact factor: 3.162

9.  Enhancement of G protein-coupled signaling by DHA phospholipids.

Authors:  Drake C Mitchell; Shui-Lin Niu; Burton J Litman
Journal:  Lipids       Date:  2003-04       Impact factor: 1.880

10.  Multinuclear NMR studies of single lipid bilayers supported in cylindrical aluminum oxide nanopores.

Authors:  Holly C Gaede; Keith M Luckett; Ivan V Polozov; Klaus Gawrisch
Journal:  Langmuir       Date:  2004-08-31       Impact factor: 3.882

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  6 in total

Review 1.  Challenges and approaches to understand cholesterol-binding impact on membrane protein function: an NMR view.

Authors:  Garima Jaipuria; Tina Ukmar-Godec; Markus Zweckstetter
Journal:  Cell Mol Life Sci       Date:  2018-03-08       Impact factor: 9.261

Review 2.  The role of membrane curvature elastic stress for function of rhodopsin-like G protein-coupled receptors.

Authors:  Olivier Soubias; Walter E Teague; Kirk G Hines; Klaus Gawrisch
Journal:  Biochimie       Date:  2014-12       Impact factor: 4.079

3.  Two classes of cholesterol binding sites for the β2AR revealed by thermostability and NMR.

Authors:  Deborah L Gater; Olivier Saurel; Iordan Iordanov; Wei Liu; Vadim Cherezov; Alain Milon
Journal:  Biophys J       Date:  2014-11-18       Impact factor: 4.033

4.  Protein Sequence and Membrane Lipid Roles in the Activation Kinetics of Bovine and Human Rhodopsins.

Authors:  Istvan Szundi; Chie Funatogawa; Ying Guo; Elsa C Y Yan; David S Kliger
Journal:  Biophys J       Date:  2017-11-07       Impact factor: 4.033

5.  Constitutive phospholipid scramblase activity of a G protein-coupled receptor.

Authors:  Michael A Goren; Takefumi Morizumi; Indu Menon; Jeremiah S Joseph; Jeremy S Dittman; Vadim Cherezov; Raymond C Stevens; Oliver P Ernst; Anant K Menon
Journal:  Nat Commun       Date:  2014-10-08       Impact factor: 14.919

6.  A protocol to measure slow protein dynamics of the cholera toxin B pentamers using broadband dielectric spectroscopy.

Authors:  Laetitia Bourgeat; Lorenza Pacini; Anatoli Serghei; Claire Lesieur
Journal:  STAR Protoc       Date:  2022-07-18
  6 in total

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