Literature DB >> 23364460

Structural and electronic aspects of hydrogen bonding in two polymorphs of butylene-N,N'-bis(O,O'-diarylphosphoramidate).

Khodayar Gholivand1, Ali A Ebrahimi Valmoozi, Hamid R Mahzouni.   

Abstract

The bisphosphoramidate (C(6)H(5)O)(2)P(O)NH(CH(2))(4)NHP(O)(OC(6)H(5))(2) crystallizes in two polymorphs, one (ndl) with a needle habit from tetrahydrofuran (THF)/ethanol and another (prm) which forms prisms from H(2)O/ethanol. The molecules in the two forms differ from each other in some torsion angles and the orientation of the diaminobutane bridge, although the differences between the similar bond lengths are not significant for the two polymorphs. The geometry optimizations at the B3LYP/6-31+G* level for isolated molecules show that the two conformers which exist in the crystalline state also represent local gas-phase energy minima. The decrease in the N-H distance from the optimized to the crystal structures has been described in terms of the decrease in electron density (ρ) at the bond-critical point (b.c.p.) of the N-H bond path when the molecule participates in hydrogen bonding, comparing the results of atoms-in-molecules (AIM) and natural bond orbital (NBO) analyses for fully optimized structures ndl and prm with their hydrogen-bonded model clusters.

Entities:  

Keywords:  X-ray crystallography; bisphosphoramidate; density-functional theory calculations; hydrogen bonding; polymorphism

Year:  2012        PMID: 23364460     DOI: 10.1107/S0108768112048331

Source DB:  PubMed          Journal:  Acta Crystallogr B        ISSN: 0108-7681


  1 in total

1.  Structural aspects of intermolecular interactions in the solid state of 1,4-dibenzylpiperazines bearing nitrile or amidine groups.

Authors:  Mateusz Rezler; Teresa Żołek; Irena Wolska; Dorota Maciejewska
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2014-09-18
  1 in total

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