Literature DB >> 23360680

Pharmacogenomics of adverse drug reactions.

Ann K Daly1.   

Abstract

Considerable progress has been made in identifying genetic risk factors for idiosyncratic adverse drug reactions in the past 30 years. These reactions can affect various tissues and organs, including liver, skin, muscle and heart, in a drug-dependent manner. Using both candidate gene and genome-wide association studies, various genes that make contributions of varying extents to each of these forms of reactions have been identified. Many of the associations identified for reactions affecting the liver and skin involve human leukocyte antigen (HLA) genes and for reactions relating to the drugs abacavir and carbamazepine, HLA genotyping is now in routine use prior to drug prescription. Other HLA associations are not sufficiently specific for translation but are still of interest in relation to underlying mechanisms for the reactions. Progress on non-HLA genes affecting adverse drug reactions has been less, but some important associations, such as those of SLCO1B1 and statin myopathy, KCNE1 and drug-induced QT prolongation and NAT2 and isoniazid-induced liver injury, are considered. Future prospects for identification of additional genetic risk factors for the various adverse drug reactions are discussed.

Entities:  

Year:  2013        PMID: 23360680      PMCID: PMC3707028          DOI: 10.1186/gm409

Source DB:  PubMed          Journal:  Genome Med        ISSN: 1756-994X            Impact factor:   11.117


  109 in total

1.  Common variation in the NOS1AP gene is associated with drug-induced QT prolongation and ventricular arrhythmia.

Authors:  Yalda Jamshidi; Ilja M Nolte; Chrysoula Dalageorgou; Dongling Zheng; Toby Johnson; Rachel Bastiaenen; Suzanne Ruddy; Daniel Talbott; Kris J Norris; Harold Snieder; Alfred L George; Vanessa Marshall; Saad Shakir; Prince J Kannankeril; Patricia B Munroe; A John Camm; Steve Jeffery; Dan M Roden; Elijah R Behr
Journal:  J Am Coll Cardiol       Date:  2012-06-06       Impact factor: 24.094

Review 2.  The role of metabolic activation in drug-induced hepatotoxicity.

Authors:  B Kevin Park; Neil R Kitteringham; James L Maggs; Munir Pirmohamed; Dominic P Williams
Journal:  Annu Rev Pharmacol Toxicol       Date:  2005       Impact factor: 13.820

3.  Genetic variations in HLA-B region and hypersensitivity reactions to abacavir.

Authors:  Seth Hetherington; Arlene R Hughes; Michael Mosteller; Denise Shortino; Katherine L Baker; William Spreen; Eric Lai; Kirstie Davies; Abigail Handley; David J Dow; Mary E Fling; Michael Stocum; Clive Bowman; Linda M Thurmond; Allen D Roses
Journal:  Lancet       Date:  2002-03-30       Impact factor: 79.321

4.  Whole-exome sequencing identifies LRIT3 mutations as a cause of autosomal-recessive complete congenital stationary night blindness.

Authors:  Christina Zeitz; Samuel G Jacobson; Christian P Hamel; Kinga Bujakowska; Marion Neuillé; Elise Orhan; Xavier Zanlonghi; Marie-Elise Lancelot; Christelle Michiels; Sharon B Schwartz; Béatrice Bocquet; Aline Antonio; Claire Audier; Mélanie Letexier; Jean-Paul Saraiva; Tien D Luu; Florian Sennlaub; Hoan Nguyen; Olivier Poch; Hélène Dollfus; Odile Lecompte; Susanne Kohl; José-Alain Sahel; Shomi S Bhattacharya; Isabelle Audo
Journal:  Am J Hum Genet       Date:  2012-12-13       Impact factor: 11.025

5.  HLA A and B locus antigens in patients with unexplained hepatitis following halothane anaesthesia.

Authors:  O E Eade; D Grice; E L Krawitt; J Trowell; R Albertini; H Festenstein; R Wright
Journal:  Tissue Antigens       Date:  1981

6.  Whole genome association study identifies polymorphisms associated with QT prolongation during iloperidone treatment of schizophrenia.

Authors:  S Volpi; C Heaton; K Mack; J B Hamilton; R Lannan; C D Wolfgang; L Licamele; M H Polymeropoulos; C Lavedan
Journal:  Mol Psychiatry       Date:  2008-06-03       Impact factor: 15.992

Review 7.  The natural history of drug-induced liver injury.

Authors:  Einar Björnsson
Journal:  Semin Liver Dis       Date:  2009-10-13       Impact factor: 6.115

8.  Hepatic adducts, circulating antibodies, and cytokine polymorphisms in patients with diclofenac hepatotoxicity.

Authors:  Guruprasad P Aithal; Lesley Ramsay; Ann K Daly; Nhareet Sonchit; Julian B S Leathart; Graeme Alexander; J Gerald Kenna; John Caldwell; Christopher P Day
Journal:  Hepatology       Date:  2004-05       Impact factor: 17.425

9.  Underlying genetic structure impacts the association between CYP2B6 polymorphisms and response to efavirenz and nevirapine.

Authors:  Melissa A Frasco; Wendy J Mack; David Van Den Berg; Bradley E Aouizerat; Kathryn Anastos; Mardge Cohen; Jack De Hovitz; Elizabeth T Golub; Ruth M Greenblatt; Chenglong Liu; David V Conti; Celeste L Pearce
Journal:  AIDS       Date:  2012-10-23       Impact factor: 4.177

10.  Cholestatic hepatitis due to antibacterial combination of amoxicillin and clavulanic acid (augmentin)

Authors:  B H Stricker; J W Van den Broek; J Keuning; W Eberhardt; H G Houben; M Johnson; A P Blok
Journal:  Dig Dis Sci       Date:  1989-10       Impact factor: 3.199

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  30 in total

Review 1.  Clinical association between pharmacogenomics and adverse drug reactions.

Authors:  Zhi-Wei Zhou; Xiao-Wu Chen; Kevin B Sneed; Yin-Xue Yang; Xueji Zhang; Zhi-Xu He; Kevin Chow; Tianxin Yang; Wei Duan; Shu-Feng Zhou
Journal:  Drugs       Date:  2015-04       Impact factor: 9.546

2.  The role of drug profiles as similarity metrics: applications to repurposing, adverse effects detection and drug-drug interactions.

Authors:  Santiago Vilar; George Hripcsak
Journal:  Brief Bioinform       Date:  2017-07-01       Impact factor: 11.622

Review 3.  Personalized medicine: Genetic risk prediction of drug response.

Authors:  Ge Zhang; Daniel W Nebert
Journal:  Pharmacol Ther       Date:  2017-02-14       Impact factor: 12.310

Review 4.  Bioreactor technologies to support liver function in vitro.

Authors:  Mohammad R Ebrahimkhani; Jaclyn A Shepard Neiman; Micha Sam B Raredon; David J Hughes; Linda G Griffith
Journal:  Adv Drug Deliv Rev       Date:  2014-03-05       Impact factor: 15.470

5.  Determining molecular predictors of adverse drug reactions with causality analysis based on structure learning.

Authors:  Mei Liu; Ruichu Cai; Yong Hu; Michael E Matheny; Jingchun Sun; Jun Hu; Hua Xu
Journal:  J Am Med Inform Assoc       Date:  2013-12-11       Impact factor: 4.497

6.  PharmGKB summary: isoniazid pathway, pharmacokinetics.

Authors:  Daniel J Klein; Sotiria Boukouvala; Ellen M McDonagh; Scott R Shuldiner; Nicola Laurieri; Caroline F Thorn; Russ B Altman; Teri E Klein
Journal:  Pharmacogenet Genomics       Date:  2016-09       Impact factor: 2.089

Review 7.  Genomic architecture of pharmacological efficacy and adverse events.

Authors:  Aparna Chhibber; Deanna L Kroetz; Kelan G Tantisira; Michael McGeachie; Cheng Cheng; Robert Plenge; Eli Stahl; Wolfgang Sadee; Marylyn D Ritchie; Sarah A Pendergrass
Journal:  Pharmacogenomics       Date:  2014-12       Impact factor: 2.533

8.  Clinical delivery of pharmacogenetic testing services: a proposed partnership between genetic counselors and pharmacists.

Authors:  Rachel Mills; Susanne B Haga
Journal:  Pharmacogenomics       Date:  2013-06       Impact factor: 2.533

Review 9.  Pharmacogenomics in diabetes mellitus: insights into drug action and drug discovery.

Authors:  Kaixin Zhou; Helle Krogh Pedersen; Adem Y Dawed; Ewan R Pearson
Journal:  Nat Rev Endocrinol       Date:  2016-04-11       Impact factor: 43.330

10.  Microphysiological heart-liver body-on-a-chip system with a skin mimic for evaluating topical drug delivery.

Authors:  Camilly P Pires de Mello; Carlos Carmona-Moran; Christopher W McAleer; Julian Perez; Elizabeth A Coln; Christopher J Long; Carlota Oleaga; Anne Riu; Reine Note; Silvia Teissier; Jessica Langer; James J Hickman
Journal:  Lab Chip       Date:  2020-01-23       Impact factor: 6.799

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