Literature DB >> 23358614

The complete nucleotide sequence of sweet potato C6 virus: a carlavirus lacking a cysteine-rich protein.

Joao De Souza1, Segundo Fuentes, Eugene I Savenkov, Wilmer Cuellar, Jan F Kreuze.   

Abstract

The complete nucleotide sequence of a sweet potato virus, first identified two decades ago as virus "C-6", was determined in this study. Sequence similarity and phylogenetic analysis clearly place it as a member of a distinct species within the genus Carlavirus, family Betaflexiviridae. Its genome structure was typical for that of other carlaviruses except that the ORF for the cysteine-rich protein was replaced by an ORF encoding a predicted protein with no similarity to any known protein.

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Year:  2013        PMID： 23358614     DOI： 10.1007/s00705-013-1614-x

Source DB:  PubMed          Journal:  Arch Virol        ISSN： 0304-8608            Impact factor:   2.574


  5 in total

1.  Making sense of nuclear localization: a zinc-finger protein encoded by a cytoplasmically replicating plant RNA virus acts a transcription factor: a novel function for a member of large family of viral proteins.

Authors:  Nina I Lukhovitskaya; Vladimir A Gushchin; Andrey G Solovyev; Eugene I Savenkov
Journal:  Plant Signal Behav       Date:  2013-06-07

2.  Bioinformatics approaches for viral metagenomics in plants using short RNAs: model case of study and application to a Cicer arietinum population.

Authors:  Walter Pirovano; Laura Miozzi; Marten Boetzer; Vitantonio Pantaleo
Journal:  Front Microbiol       Date:  2015-01-27       Impact factor: 5.640

3.  Characterization of New Isolates of Apricot vein clearing-associated virus and of a New Prunus-Infecting Virus: Evidence for Recombination as a Driving Force in Betaflexiviridae Evolution.

Authors:  Armelle Marais; Chantal Faure; Eldar Mustafayev; Thierry Candresse
Journal:  PLoS One       Date:  2015-06-18       Impact factor: 3.240

4.  Mixed Infections of Four Viruses, the Incidence and Phylogenetic Relationships of Sweet Potato Chlorotic Fleck Virus (Betaflexiviridae) Isolates in Wild Species and Sweetpotatoes in Uganda and Evidence of Distinct Isolates in East Africa.

Authors:  Arthur K Tugume; Settumba B Mukasa; Jari P T Valkonen
Journal:  PLoS One       Date:  2016-12-22       Impact factor: 3.240

Review 5.  Small RNA-Omics for Plant Virus Identification, Virome Reconstruction, and Antiviral Defense Characterization.

Authors:  Mikhail M Pooggin
Journal:  Front Microbiol       Date:  2018-11-20       Impact factor: 5.640
  5 in total

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