Literature DB >> 23357829

A microbial sensor for discovering structural probes of protein misfolding and aggregation.

Dujduan Waraho-Zhmayev1, Lizeta Gkogka, Ta-Yi Yu, Matthew P DeLisa.   

Abstract

In all cell types, protein homeostasis, or "proteostasis," is maintained by sophisticated quality control networks that regulate protein synthesis, folding, trafficking, aggregation, disaggregation, and degradation. In one notable example, Escherichia coli employ a proteostasis system that determines whether substrates of the twin-arginine translocation (Tat) pathway are correctly folded and thus suitable for transport across the tightly sealed cytoplasmic membrane. Herein, we review growing evidence that the Tat translocase itself discriminates folded proteins from those that are misfolded and/or aggregated, preferentially exporting only the former. Genetic suppressors that inactivate this mechanism have recently been isolated and provide direct evidence for the participation of the Tat translocase in structural proofreading of its protein substrates. We also discuss how this discriminatory "folding sensor" has been exploited for the discovery of structural probes (e.g., sequence mutations, pharmacologic chaperones, intracellular antibodies) that modulate the folding and solubility of virtually any protein-of-interest, including those associated with aggregation diseases (e.g., α-synuclein, amyloid-β protein). Taken together, these studies highlight the utility of engineered bacteria for rapidly and inexpensively uncovering potent anti-aggregation factors.

Entities:  

Keywords:  aggregation; amyloid-β protein; antibody therapies; chemical chaperones; directed evolution; folding quality control; high-throughput screening; protein misfolding disorders; protein secretion; α-synuclein

Mesh:

Substances:

Year:  2013        PMID: 23357829      PMCID: PMC3609123          DOI: 10.4161/pri.23328

Source DB:  PubMed          Journal:  Prion        ISSN: 1933-6896            Impact factor:   3.931


  41 in total

1.  X-ray structure of a protein-conducting channel.

Authors:  Bert Van den Berg; William M Clemons; Ian Collinson; Yorgo Modis; Enno Hartmann; Stephen C Harrison; Tom A Rapoport
Journal:  Nature       Date:  2003-12-03       Impact factor: 49.962

2.  Folding quality control in the export of proteins by the bacterial twin-arginine translocation pathway.

Authors:  Matthew P DeLisa; Danielle Tullman; George Georgiou
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-29       Impact factor: 11.205

3.  Identification of a twin-arginine leader-binding protein.

Authors:  I J Oresnik; C L Ladner; R J Turner
Journal:  Mol Microbiol       Date:  2001-04       Impact factor: 3.501

4.  The antifolding activity of SecB promotes the export of the E. coli maltose-binding protein.

Authors:  D N Collier; V A Bankaitis; J B Weiss; P J Bassford
Journal:  Cell       Date:  1988-04-22       Impact factor: 41.582

5.  Assembly of Tat-dependent [NiFe] hydrogenases: identification of precursor-binding accessory proteins.

Authors:  Alexandra Dubini; Frank Sargent
Journal:  FEBS Lett       Date:  2003-08-14       Impact factor: 4.124

6.  A subset of bacterial inner membrane proteins integrated by the twin-arginine translocase.

Authors:  Kostas Hatzixanthis; Tracy Palmer; Frank Sargent
Journal:  Mol Microbiol       Date:  2003-09       Impact factor: 3.501

7.  The sec-independent twin-arginine translocation system can transport both tightly folded and malfolded proteins across the thylakoid membrane.

Authors:  P J Hynds; D Robinson; C Robinson
Journal:  J Biol Chem       Date:  1998-12-25       Impact factor: 5.157

8.  Membrane targeting of a folded and cofactor-containing protein.

Authors:  Thomas Brüser; Takahiro Yano; Daniel C Brune; Fevzi Daldal
Journal:  Eur J Biochem       Date:  2003-03

9.  Three pure chaperone proteins of Escherichia coli--SecB, trigger factor and GroEL--form soluble complexes with precursor proteins in vitro.

Authors:  S Lecker; R Lill; T Ziegelhoffer; C Georgopoulos; P J Bassford; C A Kumamoto; W Wickner
Journal:  EMBO J       Date:  1989-09       Impact factor: 11.598

10.  Structure of the TatC core of the twin-arginine protein transport system.

Authors:  Sarah E Rollauer; Michael J Tarry; James E Graham; Mari Jääskeläinen; Franziska Jäger; Steven Johnson; Martin Krehenbrink; Sai-Man Liu; Michael J Lukey; Julien Marcoux; Melanie A McDowell; Fernanda Rodriguez; Pietro Roversi; Phillip J Stansfeld; Carol V Robinson; Mark S P Sansom; Tracy Palmer; Martin Högbom; Ben C Berks; Susan M Lea
Journal:  Nature       Date:  2012-12-02       Impact factor: 49.962

View more
  4 in total

1.  Optimizing recombinant antibodies for intracellular function using hitchhiker-mediated survival selection.

Authors:  Dujduan Waraho-Zhmayev; Bunyarit Meksiriporn; Alyse D Portnoff; Matthew P DeLisa
Journal:  Protein Eng Des Sel       Date:  2014-09-14       Impact factor: 1.650

2.  An engineered genetic selection for ternary protein complexes inspired by a natural three-component hitchhiker mechanism.

Authors:  Hyeon-Cheol Lee; Alyse D Portnoff; Mark A Rocco; Matthew P DeLisa
Journal:  Sci Rep       Date:  2014-12-22       Impact factor: 4.379

3.  A survival selection strategy for engineering synthetic binding proteins that specifically recognize post-translationally phosphorylated proteins.

Authors:  Bunyarit Meksiriporn; Morgan B Ludwicki; Erin A Stephens; Allen Jiang; Hyeon-Cheol Lee; Dujduan Waraho-Zhmayev; Lutz Kummer; Fabian Brandl; Andreas Plückthun; Matthew P DeLisa
Journal:  Nat Commun       Date:  2019-04-23       Impact factor: 14.919

Review 4.  Directed evolution to improve protein folding in vivo.

Authors:  Veronika Sachsenhauser; James Ca Bardwell
Journal:  Curr Opin Struct Biol       Date:  2017-12-23       Impact factor: 6.809

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.