Literature DB >> 23351709

Molecular insights into intracellular RNA localization.

Michael D Blower1.   

Abstract

Localization of mRNAs to specific destinations within a cell or an embryo is important for local control of protein synthesis. mRNA localization is well known to function in very large and polarized cells such as neurons, and to facilitate embryonic patterning during early development. However, recent genome-wide studies have revealed that mRNA localization is more widely utilized than previously thought to control gene expression. Not only can transcripts be localized asymmetrically within the cytoplasm, they are often also localized to symmetrically distributed organelles. Recent genetic, cytological, and biochemical studies have begun to provide molecular insight into how cells select RNAs for transport, move them to specific destinations, and control their translation. This chapter will summarize recent insights into the mechanisms and function of RNA localization with a specific emphasis on molecular insights into each step in the mRNA localization process.
Copyright © 2013 Elsevier Inc. All rights reserved.

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Year:  2013        PMID: 23351709      PMCID: PMC3746326          DOI: 10.1016/B978-0-12-407699-0.00001-7

Source DB:  PubMed          Journal:  Int Rev Cell Mol Biol        ISSN: 1937-6448            Impact factor:   6.813


  139 in total

1.  Large-scale identification of secreted and membrane-associated gene products using DNA microarrays.

Authors:  M Diehn; M B Eisen; D Botstein; P O Brown
Journal:  Nat Genet       Date:  2000-05       Impact factor: 38.330

2.  In yeast, the 3' untranslated region or the presequence of ATM1 is required for the exclusive localization of its mRNA to the vicinity of mitochondria.

Authors:  M Corral-Debrinski; C Blugeon; C Jacq
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

3.  The C. elegans homolog of nucleoporin Nup98 is required for the integrity and function of germline P granules.

Authors:  Ekaterina Voronina; Geraldine Seydoux
Journal:  Development       Date:  2010-03-24       Impact factor: 6.868

4.  Spiralian quartet developmental potential is regulated by specific localization elements that mediate asymmetric RNA segregation.

Authors:  Jeremy S Rabinowitz; J David Lambert
Journal:  Development       Date:  2010-11-01       Impact factor: 6.868

5.  Genome-wide translational profiling by ribosome footprinting.

Authors:  Nicholas T Ingolia
Journal:  Methods Enzymol       Date:  2010-03-01       Impact factor: 1.600

6.  Aplysia CPEB can form prion-like multimers in sensory neurons that contribute to long-term facilitation.

Authors:  Kausik Si; Yun-Beom Choi; Erica White-Grindley; Amitabha Majumdar; Eric R Kandel
Journal:  Cell       Date:  2010-02-05       Impact factor: 41.582

7.  Messenger RNA targeting of rice seed storage proteins to specific ER subdomains.

Authors:  S B Choi; C Wang; D G Muench; K Ozawa; V R Franceschi; Y Wu; T W Okita
Journal:  Nature       Date:  2000-10-12       Impact factor: 49.962

8.  Multiple Myo4 motors enhance ASH1 mRNA transport in Saccharomyces cerevisiae.

Authors:  Sunglan Chung; Peter A Takizawa
Journal:  J Cell Biol       Date:  2010-05-10       Impact factor: 10.539

9.  A genomewide RNAi screen for genes that affect the stability, distribution and function of P granules in Caenorhabditis elegans.

Authors:  Dustin L Updike; Susan Strome
Journal:  Genetics       Date:  2009-10-05       Impact factor: 4.562

Review 10.  Subcellular mRNA localization in animal cells and why it matters.

Authors:  Christine E Holt; Simon L Bullock
Journal:  Science       Date:  2009-11-27       Impact factor: 47.728

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  24 in total

1.  Organizing the oocyte: RNA localization meets phase separation.

Authors:  Sarah E Cabral; Kimberly L Mowry
Journal:  Curr Top Dev Biol       Date:  2020-03-09       Impact factor: 4.897

2.  Mitotic Inheritance of mRNA Facilitates Translational Activation of the Osteogenic-Lineage Commitment Factor Runx2 in Progeny of Osteoblastic Cells.

Authors:  Nelson Varela; Alejandra Aranguiz; Carlos Lizama; Hugo Sepulveda; Marcelo Antonelli; Roman Thaler; Ricardo D Moreno; Martin Montecino; Gary S Stein; Andre J van Wijnen; Mario Galindo
Journal:  J Cell Physiol       Date:  2015-09-18       Impact factor: 6.384

3.  Multifunctional roles for the protein translocation machinery in RNA anchoring to the endoplasmic reticulum.

Authors:  Sujatha Jagannathan; Jack C-C Hsu; David W Reid; Qiang Chen; Will J Thompson; Arthur M Moseley; Christopher V Nicchitta
Journal:  J Biol Chem       Date:  2014-07-25       Impact factor: 5.157

Review 4.  Control of cell migration through mRNA localization and local translation.

Authors:  Guoning Liao; Lisa Mingle; Livingston Van De Water; Gang Liu
Journal:  Wiley Interdiscip Rev RNA       Date:  2014-09-28       Impact factor: 9.957

5.  RNA-Binding Protein RBP-P Is Required for Glutelin and Prolamine mRNA Localization in Rice Endosperm Cells.

Authors:  Li Tian; Hong-Li Chou; Laining Zhang; Seon-Kap Hwang; Shawn R Starkenburg; Kelly A Doroshenk; Toshihiro Kumamaru; Thomas W Okita
Journal:  Plant Cell       Date:  2018-09-06       Impact factor: 11.277

6.  Zipcode RNA-Binding Proteins and Membrane Trafficking Proteins Cooperate to Transport Glutelin mRNAs in Rice Endosperm.

Authors:  Li Tian; Kelly A Doroshenk; Laining Zhang; Masako Fukuda; Haruhiko Washida; Toshihiro Kumamaru; Thomas Okita
Journal:  Plant Cell       Date:  2020-05-29       Impact factor: 11.277

7.  Structure of a myosin•adaptor complex and pairing by cargo.

Authors:  Hang Shi; Nimisha Singh; Filipp Esselborn; Günter Blobel
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-12       Impact factor: 11.205

Review 8.  Progress and challenges for chemical probing of RNA structure inside living cells.

Authors:  Miles Kubota; Catherine Tran; Robert C Spitale
Journal:  Nat Chem Biol       Date:  2015-11-17       Impact factor: 15.040

9.  The unfolded protein response triggers selective mRNA release from the endoplasmic reticulum.

Authors:  David W Reid; Qiang Chen; Angeline S-L Tay; Shirish Shenolikar; Christopher V Nicchitta
Journal:  Cell       Date:  2014-09-11       Impact factor: 41.582

10.  A kinesin adapter directly mediates dendritic mRNA localization during neural development in mice.

Authors:  Hao Wu; Jing Zhou; Tianhui Zhu; Ivan Cohen; Jason Dictenberg
Journal:  J Biol Chem       Date:  2020-02-28       Impact factor: 5.157

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