Literature DB >> 23349525

Minireview: miRomics in endocrinology: a novel approach for modeling endocrine diseases.

Péter M Szabó1, Henriett Butz, Péter Igaz, Károly Rácz, László Hunyady, Attila Patócs.   

Abstract

MicroRNAs (miRNAs) are small (16-24 nucleotides) noncoding RNAs that negatively regulate gene expression. Growing evidence demonstrates that miRNAs participate in the regulation of numerous physiological and pathological processes. The clinical utility of the cell-type-specific miRNA expression profile (miRomics) has been directly demonstrated in molecular classification of tumor samples and in prediction of prognosis or therapeutic responsiveness. Identification of the relevant miRNAs and their targets requires both in silico and molecular biological methods. In this review, we summarize the methodological arsenal used in miRNA-related research, and through our own data on adrenal tumors, we present how miRNA could be integrated into omics-based networks. The expanding knowledge obtained from miRNA research may lead to the development of novel diagnostic and treatment modalities in future.

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Year:  2013        PMID: 23349525      PMCID: PMC5416806          DOI: 10.1210/me.2012-1220

Source DB:  PubMed          Journal:  Mol Endocrinol        ISSN: 0888-8809


  122 in total

Review 1.  The widespread regulation of microRNA biogenesis, function and decay.

Authors:  Jacek Krol; Inga Loedige; Witold Filipowicz
Journal:  Nat Rev Genet       Date:  2010-07-27       Impact factor: 53.242

Review 2.  Experimental validation of miRNA targets.

Authors:  Donald E Kuhn; Mickey M Martin; David S Feldman; Alvin V Terry; Gerard J Nuovo; Terry S Elton
Journal:  Methods       Date:  2008-01       Impact factor: 3.608

3.  Characterization of microRNA-regulated protein-protein interaction network.

Authors:  Chun-Wei Hsu; Hsueh-Fen Juan; Hsuan-Cheng Huang
Journal:  Proteomics       Date:  2008-05       Impact factor: 3.984

4.  Global correlation analysis for micro-RNA and mRNA expression profiles in human cell lines.

Authors:  Yoshinao Ruike; Atsuhiko Ichimura; Soken Tsuchiya; Kazuharu Shimizu; Ryo Kunimoto; Yasushi Okuno; Gozoh Tsujimoto
Journal:  J Hum Genet       Date:  2008-05-10       Impact factor: 3.172

5.  Underexpression of C-myc in adrenocortical cancer: a major pathogenic event?

Authors:  P M Szabó; K Rácz; P Igaz
Journal:  Horm Metab Res       Date:  2011-03-16       Impact factor: 2.936

6.  Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.

Authors:  Aravind Subramanian; Pablo Tamayo; Vamsi K Mootha; Sayan Mukherjee; Benjamin L Ebert; Michael A Gillette; Amanda Paulovich; Scott L Pomeroy; Todd R Golub; Eric S Lander; Jill P Mesirov
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-30       Impact factor: 11.205

7.  Microtranscriptome regulation by gonadotropin-releasing hormone.

Authors:  Tony Yuen; Frederique Ruf; Tearina Chu; Stuart C Sealfon
Journal:  Mol Cell Endocrinol       Date:  2009-01-20       Impact factor: 4.102

8.  Network modeling links breast cancer susceptibility and centrosome dysfunction.

Authors:  Miguel Angel Pujana; Jing-Dong J Han; Lea M Starita; Kristen N Stevens; Muneesh Tewari; Jin Sook Ahn; Gad Rennert; Víctor Moreno; Tomas Kirchhoff; Bert Gold; Volker Assmann; Wael M Elshamy; Jean-François Rual; Douglas Levine; Laura S Rozek; Rebecca S Gelman; Kristin C Gunsalus; Roger A Greenberg; Bijan Sobhian; Nicolas Bertin; Kavitha Venkatesan; Nono Ayivi-Guedehoussou; Xavier Solé; Pilar Hernández; Conxi Lázaro; Katherine L Nathanson; Barbara L Weber; Michael E Cusick; David E Hill; Kenneth Offit; David M Livingston; Stephen B Gruber; Jeffrey D Parvin; Marc Vidal
Journal:  Nat Genet       Date:  2007-10-07       Impact factor: 38.330

9.  MicroRNA miR-7 is preferentially expressed in endocrine cells of the developing and adult human pancreas.

Authors:  Mayrin Correa-Medina; Valia Bravo-Egana; Samuel Rosero; Camillo Ricordi; Helena Edlund; Juan Diez; Ricardo L Pastori
Journal:  Gene Expr Patterns       Date:  2008-12-24       Impact factor: 1.224

10.  Human microRNA target analysis and gene ontology clustering by GOmir, a novel stand-alone application.

Authors:  Maria G Roubelakis; Pantelis Zotos; Georgios Papachristoudis; Ioannis Michalopoulos; Kalliopi I Pappa; Nicholas P Anagnou; Sophia Kossida
Journal:  BMC Bioinformatics       Date:  2009-06-16       Impact factor: 3.169

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  9 in total

Review 1.  Epigenetic alterations in human parathyroid tumors.

Authors:  Chiara Verdelli; Irene Forno; Valentina Vaira; Sabrina Corbetta
Journal:  Endocrine       Date:  2015-02-27       Impact factor: 3.633

2.  MEN1 mutations and potentially MEN1-targeting miRNAs are responsible for menin deficiency in sporadic and MEN1 syndrome-associated primary hyperparathyroidism.

Authors:  Vince Kornél Grolmusz; Katalin Borka; Annamária Kövesdi; Kinga Németh; Katalin Balogh; Csaba Dékány; András Kiss; Anna Szentpéteri; Beatrix Sármán; Anikó Somogyi; Éva Csajbók; Zsuzsanna Valkusz; Miklós Tóth; Péter Igaz; Károly Rácz; Attila Patócs
Journal:  Virchows Arch       Date:  2017-06-08       Impact factor: 4.064

Review 3.  MicroRNAs in adrenal tumors: relevance for pathogenesis, diagnosis, and therapy.

Authors:  Peter Igaz; Ivan Igaz; Zoltán Nagy; Gábor Nyírő; Peter M Szabó; András Falus; Attila Patócs; Károly Rácz
Journal:  Cell Mol Life Sci       Date:  2014-10-09       Impact factor: 9.261

Review 4.  Circulating miRNAs as biomarkers for endocrine disorders.

Authors:  H Butz; N Kinga; K Racz; A Patocs
Journal:  J Endocrinol Invest       Date:  2015-05-28       Impact factor: 4.256

Review 5.  Mechanisms behind context-dependent role of glucocorticoids in breast cancer progression.

Authors:  Henriett Butz; Attila Patócs
Journal:  Cancer Metastasis Rev       Date:  2022-06-27       Impact factor: 9.264

6.  In silico analysis of pathways affected by differentially expressed microRNA in adrenocortical tumors.

Authors:  A Zsippai; P M Szabó; D R Szabó; Z Nagy; A Patócs; K Rácz; P Igaz
Journal:  J Endocrinol Invest       Date:  2013-07-01       Impact factor: 4.256

7.  Research resource: small RNA-seq of human granulosa cells reveals miRNAs in FSHR and aromatase genes.

Authors:  Agne Velthut-Meikas; Jaak Simm; Timo Tuuri; Juha S Tapanainen; Madis Metsis; Andres Salumets
Journal:  Mol Endocrinol       Date:  2013-05-09

8.  Serum miR-375 for Diagnostic and Prognostic Purposes in Medullary Thyroid Carcinoma.

Authors:  Simona Censi; Loris Bertazza; Ilaria Piva; Jacopo Manso; Clara Benna; Maurizio Iacobone; Alberto Mondin; Mario Plebani; Diego Faggian; Francesca Galuppini; Gianmaria Pennelli; Susi Barollo; Caterina Mian
Journal:  Front Endocrinol (Lausanne)       Date:  2021-03-29       Impact factor: 5.555

Review 9.  microRNAs as Potential Biomarkers in Adrenocortical Cancer: Progress and Challenges.

Authors:  Nadia Cherradi
Journal:  Front Endocrinol (Lausanne)       Date:  2016-01-20       Impact factor: 5.555

  9 in total

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