Literature DB >> 2334688

Kinetic competence of enzymic intermediates: fact or fiction?

W W Cleland1.   

Abstract

A number of enzymatic reactions involve intermediates that are not normally released during the reaction. Whether such an intermediate when added to the enzyme reacts as fast or faster than the normal substrates, and thus is "kinetically competent", depends on the degree to which the equilibrium constant for forming the intermediate from the substrates is different on the enzyme surface and in solution, as well as on the relative affinities of the enzyme for substrate and intermediate. Similar values for these equilibrium constants require that the intermediate react slowly, while a far more favorable value for intermediate formation on the enzyme allows the intermediate to react at up to the diffusion-limiting rate. When one intermediate is formed from two substrates, it may react much more rapidly than when two intermediates are formed from two substrates, or one from one. Comparison of the kinetics of the putative intermediate(s) and the substrate(s) can reveal a great deal about the mechanism of the catalytic reaction and the kinetic barrier that normally keeps the intermediate(s) on the enzyme.

Mesh:

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Year:  1990        PMID: 2334688     DOI: 10.1021/bi00465a006

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  4 in total

1.  Rubisco Synthesis, Assembly, Mechanism, and Regulation.

Authors:  S. Gutteridge; A. A. Gatenby
Journal:  Plant Cell       Date:  1995-07       Impact factor: 11.277

2.  Noncovalent Intermediate of Thymidylate Synthase: Fact or Fiction?

Authors:  Svetlana A Kholodar; Amnon Kohen
Journal:  J Am Chem Soc       Date:  2016-06-24       Impact factor: 15.419

3.  Multiple catalytic roles of His 287 of Rhodospirillum rubrum ribulose 1,5-bisphosphate carboxylase/oxygenase.

Authors:  M R Harpel; F W Larimer; F C Hartman
Journal:  Protein Sci       Date:  1998-03       Impact factor: 6.725

4.  The role of phosphate in a multistep enzymatic reaction: reactions of the substrate and intermediate in pieces.

Authors:  Svetlana A Kholodar; C Leigh Allen; Andrew M Gulick; Andrew S Murkin
Journal:  J Am Chem Soc       Date:  2015-02-10       Impact factor: 15.419

  4 in total

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