Literature DB >> 23345906

Decomposition reaction of dioxetanone in firefly bioluminescence by computer experiment.

Naohisa Wada1, Hironori Sakai.   

Abstract

Firefly luciferin (Ln) reacts with molecular oxygen in the presence of the enzyme luciferase (E), the Mg(+2) ion and ATP to form a four-membered cyclic peroxide, so-called dioxetanone, which has not yet been observed by spectrophotometric techniques. Subsequently, dioxetanone decomposes into carbon dioxide (CO(2)) and electronically excited oxyluciferin (Oxyln(-∗)), emitting yellow-green light. In order to clarify the characteristics of the elementary reaction path from dioxetanone to Oxyln(-∗), the potential energy curve of the singlet ground-state (S(0)-PEC) along the reaction coordinate was obtained by the intrinsic reaction coordinate (IRC) calculations using the AM1 Hamiltonian. Furthermore, the potential energy curve of the singlet excited-state (S(1)-PEC) was calculated, because dioxetanone decomposes to Oxyln(-∗) along the reaction coordinate. The S(1)-PEC relative to S(0)-PEC was estimated at each point of the reaction coordinate using the INDO/S, where only the singly-excited configuration interactions (CI) constructed from 20 occupied and 20 unoccupied molecular orbitals (MOs) were considered. As a result of these calculations, it was concluded that (1) firefly dioxetanone might not be an intermediate but rather be in an unstable transition state; (2) the S(0)-PEC has an activation barrier of 37.5 kcal/mol for dioxetanone formation and the reaction is exothermic along the S(0)-PEC; (3) the S(1)-PEC approaches the S(0)-PEC in a concave manner where dioxetanone decomposes to efficiently produce Oxyln(-∗); and (4) rupturing of an O-O bond in dioxetanone can trigger the coming and going of electrons in a "cradle" motion mediated by S(0)- and S(1)-PECs in the chemiexcitation step toward Oxyln(-∗).

Entities:  

Keywords:  dioxetanone; firefly bioluminescence; oxyluciferin; semiempirical molecular orbital method; transition state

Year:  2005        PMID: 23345906      PMCID: PMC3456329          DOI: 10.1007/s10867-005-0172-1

Source DB:  PubMed          Journal:  J Biol Phys        ISSN: 0092-0606            Impact factor:   1.365


  2 in total

1.  Bioluminescence of the firefly: key steps in the formation of the electronically excited state for model systems.

Authors:  J A Koo; S P Schmidt; G B Schuster
Journal:  Proc Natl Acad Sci U S A       Date:  1978-01       Impact factor: 11.205

Review 2.  Chemical aspects of bioluminescence.

Authors:  H I Mager; S C Tu
Journal:  Photochem Photobiol       Date:  1995-10       Impact factor: 3.421

  2 in total

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