Literature DB >> 23345709

Non-normal Statistics of DNA Sequences of Prokaryotes.

B J West1, P Allegrini, M Buiatti, P Grigolini.   

Abstract

The √ n-rule of Schrödinger in his discussion of DNA is based onnormal statistics and equilibrium physics. Herein the kurtosis is used tomeasure the deviation from normality of the stistics of non-equilibrium DNAsequences. A pattern for this deviation from normality is identified andthis signature is found in prokaryotes. The signature is explained by atheory of DNA sequences that involves finite length DNA walks withdynamically generated long-range correlations.

Keywords:  DNA walk; Lévy statistics; inverse power law; nonlinear dynamics

Year:  2000        PMID： 23345709      PMCID： PMC3456183          DOI： 10.1023/A:1005284418550

Source DB:  PubMed          Journal:  J Biol Phys        ISSN： 0092-0606            Impact factor:   1.365


  9 in total

1.  Statistical mechanics in biology: how ubiquitous are long-range correlations?

Authors:  H E Stanley; S V Buldyrev; A L Goldberger; Z D Goldberger; S Havlin; R N Mantegna; S M Ossadnik; C K Peng; M Simons
Journal:  Physica A       Date:  1994-04-01       Impact factor: 3.263

2.  Characterizing long-range correlations in DNA sequences from wavelet analysis.

Authors: 
Journal:  Phys Rev Lett       Date:  1995-04-17       Impact factor: 9.161

3.  Evolution of long-range fractal correlations and 1/f noise in DNA base sequences.

Authors: 
Journal:  Phys Rev Lett       Date:  1992-06-22       Impact factor: 9.161

4.  Long-range correlations in nucleotide sequences.

Authors:  C K Peng; S V Buldyrev; A L Goldberger; S Havlin; F Sciortino; M Simons; H E Stanley
Journal:  Nature       Date:  1992-03-12       Impact factor: 49.962

5.  Dynamical approach to Lévy processes.

Authors: 
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  1996-11

6.  Dynamical approach to anomalous diffusion: Response of Lévy processes to a perturbation.

Authors: 
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  1994-10

7.  Dynamical model for DNA sequences.

Authors: 
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  1995-11

8.  Generalized Lévy-walk model for DNA nucleotide sequences.

Authors:  S V Buldyrev; A L Goldberger; S Havlin; M Simons; H E Stanley
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  1993-06

9.  Diffusion of walkers with persistent velocities.

Authors: 
Journal:  Phys Rev A       Date:  1991-05-15       Impact factor: 3.140
  9 in total
  1 in total

Review 1.  Structures and stability of simple DNA repeats from bacteria.

Authors:  Vaclav Brazda; Miroslav Fojta; Richard P Bowater
Journal:  Biochem J       Date:  2020-01-31       Impact factor: 3.857
  1 in total

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