Literature DB >> 23337476

Optimising the combination of thermostabilising mutations in the neurotensin receptor for structure determination.

Yoko Shibata1, Jelena Gvozdenovic-Jeremic, James Love, Brian Kloss, Jim F White, Reinhard Grisshammer, Christopher G Tate.   

Abstract

Conformational thermostabilisation of G protein-coupled receptors is a successful approach for their structure determination. We have recently determined the structure of a thermostabilised neurotensin receptor NTS1 in complex with its peptide agonist and here we describe the strategy for the identification and combination of the 6 thermostabilising mutations essential for crystallisation. First, thermostability assays were performed on a panel of 340 detergent-solubilised Ala/Leu NTS1 mutants and the best 16 thermostabilising mutations were identified. These mutations were combined pair-wise in nearly all combinations (119 out of a possible 120 combinations) and each mutant was expressed and its thermostability was experimentally determined. A theoretical stability score was calculated from the sum of the stabilities measured for each double mutant and applied to develop 24 triple mutants, which in turn led to the construction of 14 quadruple mutants. Use of the thermostability data for the double mutants to predict further mutant combinations resulted in a greater percentage of the triple and quadruple mutants showing improved thermostability than if only the thermostability data for the single mutations was considered. The best quadruple mutant (NTS1-Nag36k) was further improved by including an additional 2 mutations (resulting in NTS1-GW5) that were identified from a complete Ala/Leu scan of Nag36k by testing the thermostability of the mutants in situ in whole bacteria. NTS1-GW5 had excellent stability in short chain detergents and could be readily purified as a homogenous sample that ultimately allowed crystallisation and structure determination.
Copyright © 2013 Elsevier B.V. All rights reserved.

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Year:  2013        PMID: 23337476      PMCID: PMC3582860          DOI: 10.1016/j.bbamem.2013.01.008

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  36 in total

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Journal:  Science       Date:  2000-08-04       Impact factor: 47.728

2.  Automated large-scale purification of a G protein-coupled receptor for neurotensin.

Authors:  Jim F White; Loc B Trinh; Joseph Shiloach; Reinhard Grisshammer
Journal:  FEBS Lett       Date:  2004-04-30       Impact factor: 4.124

3.  Critical features for biosynthesis, stability, and functionality of a G protein-coupled receptor uncovered by all-versus-all mutations.

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Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-04       Impact factor: 11.205

4.  Structure of the adenosine A(2A) receptor in complex with ZM241385 and the xanthines XAC and caffeine.

Authors:  Andrew S Doré; Nathan Robertson; James C Errey; Irene Ng; Kaspar Hollenstein; Ben Tehan; Edward Hurrell; Kirstie Bennett; Miles Congreve; Francesca Magnani; Christopher G Tate; Malcolm Weir; Fiona H Marshall
Journal:  Structure       Date:  2011-09-07       Impact factor: 5.006

5.  Structure of bovine rhodopsin in a trigonal crystal form.

Authors:  Jade Li; Patricia C Edwards; Manfred Burghammer; Claudio Villa; Gebhard F X Schertler
Journal:  J Mol Biol       Date:  2004-11-05       Impact factor: 5.469

6.  Co-evolving stability and conformational homogeneity of the human adenosine A2a receptor.

Authors:  Francesca Magnani; Yoko Shibata; Maria J Serrano-Vega; Christopher G Tate
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-29       Impact factor: 11.205

7.  The 2.6 angstrom crystal structure of a human A2A adenosine receptor bound to an antagonist.

Authors:  Veli-Pekka Jaakola; Mark T Griffith; Michael A Hanson; Vadim Cherezov; Ellen Y T Chien; J Robert Lane; Adriaan P Ijzerman; Raymond C Stevens
Journal:  Science       Date:  2008-10-02       Impact factor: 47.728

8.  Agonist-bound adenosine A2A receptor structures reveal common features of GPCR activation.

Authors:  Guillaume Lebon; Tony Warne; Patricia C Edwards; Kirstie Bennett; Christopher J Langmead; Andrew G W Leslie; Christopher G Tate
Journal:  Nature       Date:  2011-05-18       Impact factor: 49.962

9.  Thermostabilization of the neurotensin receptor NTS1.

Authors:  Yoko Shibata; Jim F White; Maria J Serrano-Vega; Francesca Magnani; Amanda L Aloia; Reinhard Grisshammer; Christopher G Tate
Journal:  J Mol Biol       Date:  2009-05-05       Impact factor: 5.469

10.  Crystal structures of a stabilized β1-adrenoceptor bound to the biased agonists bucindolol and carvedilol.

Authors:  Tony Warne; Patricia C Edwards; Andrew G W Leslie; Christopher G Tate
Journal:  Structure       Date:  2012-05-09       Impact factor: 5.006

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  18 in total

1.  Rapid Bioinformatic Identification of Thermostabilizing Mutations.

Authors:  David B Sauer; Nathan K Karpowich; Jin Mei Song; Da-Neng Wang
Journal:  Biophys J       Date:  2015-10-06       Impact factor: 4.033

Review 2.  New approaches towards the understanding of integral membrane proteins: A structural perspective on G protein-coupled receptors.

Authors:  Reinhard Grisshammer
Journal:  Protein Sci       Date:  2017-06-07       Impact factor: 6.725

3.  Identifying Thermostabilizing Mutations in Membrane Proteins by Bioinformatics.

Authors:  Christopher G Tate
Journal:  Biophys J       Date:  2015-10-06       Impact factor: 4.033

Review 4.  Stabilization of G protein-coupled receptors by point mutations.

Authors:  Franziska M Heydenreich; Ziva Vuckovic; Milos Matkovic; Dmitry B Veprintsev
Journal:  Front Pharmacol       Date:  2015-04-20       Impact factor: 5.810

5.  Structural dynamics and thermostabilization of neurotensin receptor 1.

Authors:  Sangbae Lee; Supriyo Bhattacharya; Christopher G Tate; Reinhard Grisshammer; Nagarajan Vaidehi
Journal:  J Phys Chem B       Date:  2015-04-07       Impact factor: 2.991

6.  Structural prerequisites for G-protein activation by the neurotensin receptor.

Authors:  Brian E Krumm; Jim F White; Priyanka Shah; Reinhard Grisshammer
Journal:  Nat Commun       Date:  2015-07-24       Impact factor: 14.919

7.  GPCR structure, function, drug discovery and crystallography: report from Academia-Industry International Conference (UK Royal Society) Chicheley Hall, 1-2 September 2014.

Authors:  Alexander Heifetz; Gebhard F X Schertler; Roland Seifert; Christopher G Tate; Patrick M Sexton; Vsevolod V Gurevich; Daniel Fourmy; Vadim Cherezov; Fiona H Marshall; R Ian Storer; Isabel Moraes; Irina G Tikhonova; Christofer S Tautermann; Peter Hunt; Tom Ceska; Simon Hodgson; Mike J Bodkin; Shweta Singh; Richard J Law; Philip C Biggin
Journal:  Naunyn Schmiedebergs Arch Pharmacol       Date:  2015-03-14       Impact factor: 3.000

Review 8.  How Can Mutations Thermostabilize G-Protein-Coupled Receptors?

Authors:  Nagarajan Vaidehi; Reinhard Grisshammer; Christopher G Tate
Journal:  Trends Pharmacol Sci       Date:  2015-11-05       Impact factor: 14.819

9.  A mutagenesis and screening strategy to generate optimally thermostabilized membrane proteins for structural studies.

Authors:  Francesca Magnani; Maria J Serrano-Vega; Yoko Shibata; Saba Abdul-Hussein; Guillaume Lebon; Jennifer Miller-Gallacher; Ankita Singhal; Annette Strege; Jennifer A Thomas; Christopher G Tate
Journal:  Nat Protoc       Date:  2016-07-28       Impact factor: 13.491

10.  Transient and stable expression of the neurotensin receptor NTS1: a comparison of the baculovirus-insect cell and the T-REx-293 expression systems.

Authors:  Su Xiao; Jim F White; Michael J Betenbaugh; Reinhard Grisshammer; Joseph Shiloach
Journal:  PLoS One       Date:  2013-05-16       Impact factor: 3.240

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