Literature DB >> 23335412

Functional analysis of a class I holin, P2 Y.

Kam H To1, Jill Dewey, Jeremy Weaver, Taehyun Park, Ry Young.   

Abstract

Y is the putative holin gene of the paradigm coliphage P2 and encodes a 93-amino-acid protein. Y is predicted to be an integral membrane protein that adopts an N-out C-in membrane topology with 3 transmembrane domains (TMDs) and a highly charged C-terminal cytoplasmic tail. The same features are observed in the canonical class I lambda holin, the S105 protein of phage lambda, which controls lysis by forming holes in the plasma membrane at a programmed time. S105 has been the subject of intensive genetic, cellular, and biochemical analyses. Although Y is not related to S105 in its primary structure, its characterization might prove useful in discerning the essential traits for holin function. Here, we used physiological and genetic approaches to show that Y exhibits the essential holin functional criteria, namely, allele-specific delayed-onset lethality and sensitivity to the energization of the membrane. Taken together, these results suggest that class I holins share a set of unusual features that are needed for their remarkable ability to program the end of the phage infection cycle with precise timing. However, Y holin function requires the integrity of its short cytoplasmic C-terminal domain, unlike for S105. Finally, instead of encoding a second translational product of Y as an antiholin, as shown for lambda S107, the P2 lysis cassette encodes another predicted membrane protein, LysA, which is shown here to have a Y-specific antiholin character.

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Year:  2013        PMID: 23335412      PMCID: PMC3592007          DOI: 10.1128/JB.01986-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  27 in total

1.  Biochemical and genetic evidence for three transmembrane domains in the class I holin, lambda S.

Authors:  A Gründling; U Bläsi; R Young
Journal:  J Biol Chem       Date:  2000-01-14       Impact factor: 5.157

2.  Dimerization between the holin and holin inhibitor of phage lambda.

Authors:  A Gründling; D L Smith; U Bläsi; R Young
Journal:  J Bacteriol       Date:  2000-11       Impact factor: 3.490

3.  Genetic and biochemical analysis of dimer and oligomer interactions of the lambda S holin.

Authors:  A Gründling; U Bläsi; R Young
Journal:  J Bacteriol       Date:  2000-11       Impact factor: 3.490

4.  Holin triggering in real time.

Authors:  Rebecca White; Shinobu Chiba; Ting Pang; Jill S Dewey; Christos G Savva; Andreas Holzenburg; Kit Pogliano; Ry Young
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-27       Impact factor: 11.205

5.  A hidden Markov model for predicting transmembrane helices in protein sequences.

Authors:  E L Sonnhammer; G von Heijne; A Krogh
Journal:  Proc Int Conf Intell Syst Mol Biol       Date:  1998

6.  The pUC18CM plasmids: a chloramphenicol resistance gene cassette for site-directed insertion and deletion mutagenesis in Escherichia coli.

Authors:  H P Schweizer
Journal:  Biotechniques       Date:  1990-06       Impact factor: 1.993

7.  The hydrophilic C-terminal part of the lambda S holin is non-essential for intermolecular interactions.

Authors:  A Rietsch; P Fraisl; A Graschopf; U Bläsi
Journal:  FEMS Microbiol Lett       Date:  1997-08-15       Impact factor: 2.742

8.  A simple method for displaying the hydropathic character of a protein.

Authors:  J Kyte; R F Doolittle
Journal:  J Mol Biol       Date:  1982-05-05       Impact factor: 5.469

9.  Functions involved in bacteriophage P2-induced host cell lysis and identification of a new tail gene.

Authors:  R Ziermann; B Bartlett; R Calendar; G E Christie
Journal:  J Bacteriol       Date:  1994-08       Impact factor: 3.490

10.  Identification and mutational analysis of bacteriophage PRD1 holin protein P35.

Authors:  Pia S Rydman; Dennis H Bamford
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

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  11 in total

1.  Localization and Regulation of the T1 Unimolecular Spanin.

Authors:  Rohit Kongari; Jeffrey Snowden; Joel D Berry; Ry Young
Journal:  J Virol       Date:  2018-10-29       Impact factor: 5.103

2.  Genetic dissection of T4 lysis.

Authors:  Samir H Moussa; Jessica L Lawler; Ry Young
Journal:  J Bacteriol       Date:  2014-04-04       Impact factor: 3.490

Review 3.  Bacteriophage P2.

Authors:  Gail E Christie; Richard Calendar
Journal:  Bacteriophage       Date:  2016-02-18

4.  The Last r Locus Unveiled: T4 RIII Is a Cytoplasmic Antiholin.

Authors:  Yi Chen; Ry Young
Journal:  J Bacteriol       Date:  2016-08-25       Impact factor: 3.490

5.  Probing the structure of the S105 hole.

Authors:  Kam H To; Ry Young
Journal:  J Bacteriol       Date:  2014-08-04       Impact factor: 3.490

6.  Stable micron-scale holes are a general feature of canonical holins.

Authors:  Christos G Savva; Jill S Dewey; Samir H Moussa; Kam H To; Andreas Holzenburg; Ry Young
Journal:  Mol Microbiol       Date:  2013-11-21       Impact factor: 3.501

7.  Endolysin Regulation in Phage Mu Lysis.

Authors:  Jake S Chamblee; Jolene Ramsey; Yi Chen; Lori T Maddox; Curtis Ross; Kam H To; Jesse L Cahill; Ry Young
Journal:  mBio       Date:  2022-04-26       Impact factor: 7.786

8.  Complete Genome Sequence of Citrobacter freundii Myophage Michonne.

Authors:  Christopher L Bernal; Victoria E Berkowitz; Jesse L Cahill; Eric S Rasche; Gabriel F Kuty Everett
Journal:  Genome Announc       Date:  2015-10-01

9.  The temperate Burkholderia phage AP3 of the Peduovirinae shows efficient antimicrobial activity against B. cenocepacia of the IIIA lineage.

Authors:  Bartosz Roszniowski; Agnieszka Latka; Barbara Maciejewska; Dieter Vandenheuvel; Tomasz Olszak; Yves Briers; Giles S Holt; Miguel A Valvano; Rob Lavigne; Darren L Smith; Zuzanna Drulis-Kawa
Journal:  Appl Microbiol Biotechnol       Date:  2016-10-21       Impact factor: 4.813

Review 10.  Enzymes and Mechanisms Employed by Tailed Bacteriophages to Breach the Bacterial Cell Barriers.

Authors:  Sofia Fernandes; Carlos São-José
Journal:  Viruses       Date:  2018-07-27       Impact factor: 5.048

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