Literature DB >> 23320658

Communication: a simple analytical formula for the free energy of ligand-receptor-mediated interactions.

Stefano Angioletti-Uberti1, Patrick Varilly, Bortolo M Mognetti, Alexei V Tkachenko, Daan Frenkel.   

Abstract

Recently [P. Varilly, S. Angioletti-Uberti, B. M. Mognetti, and D. Frenkel, "A general theory of DNA-mediated and other valence-limited colloidal interactions," J. Chem. Phys. 137, 094108 (2012)], we presented a general theory for calculating the strength and properties of colloidal interactions mediated by ligand-receptor bonds (such as those that bind DNA-coated colloids). In this Communication, we derive a surprisingly simple analytical form for the interaction free energy, which was previously obtainable only via a costly numerical thermodynamic integration. As a result, the computational effort to obtain potentials of interaction is significantly reduced. Moreover, we can gain insight from this analytic expression for the free energy in limiting cases. In particular, the connection of our general theory to other previous specialised approaches is now made transparent. This important simplification will significantly broaden the scope of our theory.

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Year:  2013        PMID: 23320658     DOI: 10.1063/1.4775806

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  8 in total

1.  Stoichiometric control of DNA-grafted colloid self-assembly.

Authors:  Thi Vo; Venkat Venkatasubramanian; Sanat Kumar; Babji Srinivasan; Suchetan Pal; Yugang Zhang; Oleg Gang
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-06       Impact factor: 11.205

2.  Volume and porosity thermal regulation in lipid mesophases by coupling mobile ligands to soft membranes.

Authors:  Lucia Parolini; Bortolo M Mognetti; Jurij Kotar; Erika Eiser; Pietro Cicuta; Lorenzo Di Michele
Journal:  Nat Commun       Date:  2015-01-07       Impact factor: 14.919

3.  Influence of length and flexibility of spacers on the binding affinity of divalent ligands.

Authors:  Susanne Liese; Roland R Netz
Journal:  Beilstein J Org Chem       Date:  2015-05-15       Impact factor: 2.883

4.  Linker-mediated self-assembly of mobile DNA-coated colloids.

Authors:  Xiuyang Xia; Hao Hu; Massimo Pica Ciamarra; Ran Ni
Journal:  Sci Adv       Date:  2020-05-20       Impact factor: 14.136

5.  Comprehensive view of microscopic interactions between DNA-coated colloids.

Authors:  Fan Cui; Sophie Marbach; Jeana Aojie Zheng; Miranda Holmes-Cerfon; David J Pine
Journal:  Nat Commun       Date:  2022-04-28       Impact factor: 17.694

Review 6.  Self-Assembly of DNA-Grafted Colloids: A Review of Challenges.

Authors:  Manish Dwivedi; Swarn Lata Singh; Atul S Bharadwaj; Vimal Kishore; Ajay Vikram Singh
Journal:  Micromachines (Basel)       Date:  2022-07-14       Impact factor: 3.523

7.  On the design of precision nanomedicines.

Authors:  Xiaohe Tian; Stefano Angioletti-Uberti; Giuseppe Battaglia
Journal:  Sci Adv       Date:  2020-01-24       Impact factor: 14.136

8.  Combinatorial entropy behaviour leads to range selective binding in ligand-receptor interactions.

Authors:  Meng Liu; Azzurra Apriceno; Miguel Sipin; Edoardo Scarpa; Laura Rodriguez-Arco; Alessandro Poma; Gabriele Marchello; Giuseppe Battaglia; Stefano Angioletti-Uberti
Journal:  Nat Commun       Date:  2020-09-24       Impact factor: 14.919

  8 in total

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