| Literature DB >> 23316247 |
Xiaoguang Liu1, Xia Ning, Yan Zhang, Wenfeng Chen, Zhangwu Zhao, Qingwen Zhang.
Abstract
The silkworm, Bombyx mori, is an important economic insect for silk production. However, many of the mature peptides relevant to its various life stages remain unknown. Using RP-HPLC, MALDI-TOF MS, and previously identified peptides from B. mori and other insects in the transcriptome database, we created peptide profiles showing a total of 6 ion masses that could be assigned to peptides in eggs, including one previously unidentified peptide. A further 49 peptides were assigned to larval brains. 17 new mature peptides were identified in isolated masses. 39 peptides were found in pupal brains with 8 unidentified peptides. 48 were found in adult brains with 12 unidentified peptides. These new unidentified peptides showed highly significant matches in all MS analysis. These matches were then searched against the National Center for Biotechnology Information (NCBI) database to provide new annotations for these mature peptides. In total, 59 mature peptides in 19 categories were found in the brains of silkworms at the larval, pupal, and adult stages. These results demonstrate that peptidomic variation across different developmental stages can be dramatic. Moreover, the corpora cardiaca-corpora allata (CC-CA) complex was examined during the fifth larval instar. A total of 41 ion masses were assigned to peptides.Entities:
Year: 2012 PMID: 23316247 PMCID: PMC3534322 DOI: 10.1155/2012/640359
Source DB: PubMed Journal: Int J Pept ISSN: 1687-9767
The mature peptides of Bombyx mori from different developmental stages identified or assigned by MALDI-TOF MS.
| Number | Peptide clusters | Maturae peptide name | Amino acid sequence | Reference | Transcripts | Monoisotopic masses M+H]+ | Egg | Larva | Pupa | Adult | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Calculated | Measured | ||||||||||
| 1 | AKH | AKH1(Q1) | QLTFTSSWG-NH2 | [ | AB298930 | 1025.48 | 1025.58 | + | + | + | + |
| AKH2(Q1) | QLTFTPGWGQ-NH2 | [ | AB298931 | 1133.55 | 1133.78 | + | + | + | + | ||
| AKH3(Q1) | QITFSRDWSG-NH2 | [ | AB298938 | 1195.56 | 1194.85 | + | + | + | + | ||
| AKH3 | pEITFSRDWSG-NH2 | [ | 1179.60 | 1179.61 | + | ||||||
|
| |||||||||||
| 2 | Allatostatin A | Allatostatin-1 | SPQYDFGL-NH2 | [ | AF309090 | 925.42 | 925.57 | + | |||
| Allatostatin-2 | AYSYVSEYKRLPVYNFGL-NH2 | [ | 2168.09 | 2167.621 | + | ||||||
| Allatostatin-3 | SRPYLFGL-NH2 | [ | 951.52 | 951.41 | + | + | |||||
| Allatostatin-4 | ARPYSFGL-NH2 | [ | 909.47 | 909.32 | + | + | + | ||||
| Allatostatin-5 | ARMYSFGL-NH2 | [ | 943.46 | 943.46 | + | + | + | + | |||
| Allatostatin-6 | ARSYSFGL-NH2 | [ | 899.45 | 899.52 | + | + | |||||
| Allatostatin-7 | LSSKFNFGL-NH2 | [ | 1011.54 | 1011.54 | + | + | |||||
| Allatostatin-8(Q1) | QRDMHRFSFGL-NH2 | [ | 1392.67 | 1393.88 | + | + | + | ||||
| Allatostatin-8 | pERDMHRFSFGL-NH2 | [ | 1375.7 | 1375.60 | + | + | + | ||||
|
| |||||||||||
| 3 | Bommo-AT | Bommo-AT | GFKNVEMMTARGF-NH2 | [ | AY970687 | 1486.71 | 1486.69 | + | + | + | |
|
| |||||||||||
| 4 | Bommo AST-C | AST-C | pEVRFRQCYFNPISCF-NH2 | [ | AB330418 | 1888.90 | 1888.70 | + | |||
| AST-C(Q1) | QVRFRQCYFNPISCF-NH2 | [ | 1906.90 | 1960.96 | + | ||||||
|
| |||||||||||
| 5 | BRFa | BRFa-1 | SAIDRSMIRF-NH2 | [ | AB234100 | 1194.62 | 1194.85 | + | + | + | |
| BRFa-2 | SASFVRF-NH2 | [ | 812.42 | 812.42 | + | + | + | ||||
| BRFa-3 | DPSFIRF-NH2 | [ | 880.44 | 880.48 | + | + | + | ||||
| BRFa-4 | ARNHFIRL-NH2 | [ | 1025.59 | 1025.63 | + | + | |||||
|
| |||||||||||
| 6 | B-myosuppressin (BMS) | BMS | pEDVVHSFLRF-NH2 | [ | NM_001173411 | 1229.6 | 1229.54 | + | + | + | |
| BMS(Q1) | QDVVHSFLRF-NH2 | [ | 1246.65 | 1246.55 | + | + | + | ||||
|
| |||||||||||
| 7 | CAPA/CAP2b | CAPA-PVK-1 | PDGVLNLYPFPRV-NH2 | AB362227 | 1485.80 | 1486.54 | + | + | |||
| CAPA-PVK-2 | pELYAFPRV-NH2 | 975.50 | 975.71 | + | + | ||||||
| CAPA-PK | LKNGDDDVVNQNED-NH2 | 1573.69 | 1573.90 | + | |||||||
| CAPA-PVK-2(Q1) | QLYAFPRV-NH2 | 992.54 | 992.80 | + | + | ||||||
|
| |||||||||||
| 8 | CCAP | CCAP | PFCNAFTGC-NH2 | [ | AB298937 | 958.37 | 956.42 | + | + | + | |
|
| |||||||||||
| 9 | Corazonin | Corazonin | pETFQYSRGWTN-NH2 | AB106876 | 1369.7 | 1369.57 | + | + | |||
| Corazonin(Q1) | QTFQYSRGWTN-NH2 | 1386.63 | 1385.74 | + | + | ||||||
|
| |||||||||||
| 10 | Diapause Hormone (DH) | DH | GALWFGPRL-NH2 | [ | D28810 | 1015.56 | 1015.73 | + | + | + | |
|
| |||||||||||
| 11 | Leucokinin | Leucokinin-2 | VRFSPWG-NH2 | AB298928 | 847.43 | 847.53 | + | ||||
| Leucokinin-3 | KVKFSAWG-NH2 | 921.51 | 921.67 | + | |||||||
|
| |||||||||||
| 12 | NPLP-1 | NPLP-1(AYL) | SALGPENDYAVLKDFEDNAYL-NH2 | AB362222 | 2343.09 | 2344.94 | + | + | |||
| NPLP-1(LLH) | NIAALARNGLLH-NH2 | 1261.73 | 1261.57 | + | + | + | |||||
| NPLP-1(NSY) | NIATLAKNGYLRNSGANSY-NH2 | 2026.02 | 2027.19 | + | + | + | |||||
| NPLP-1(SAM) | NLASIARLRSYSAM-NH2 | 1551.82 | 1551.95 | + | |||||||
| NPLP-1(YRM) | NIQALARDGYRM-NH2 | 1406.70 | 1406.72 | + | |||||||
|
| |||||||||||
| 13 | Orcokinin | Orcokinin-3(I) | NFDEIDRSSLNTFV-NH2 | [ | AB298932 | 1655.78 | 1656.74 | + | + | ||
| Orcokinin-4(II) | NFDEIDRSSMPFPYAI-NH2 | [ | 1900.87 | 1901.98 | + | + | + | ||||
| Orcokinin-5 | YRPDYPMDEIDLSHFPVGS-NH2 | Confirmed in this study | 2237.01 | 2237.39 | + | + | |||||
|
| |||||||||||
| 14 | PTST | PTST-1 | AWQDLNSAW-NH2 | [ | AB073553 | 1089.49 | 1089.74 | + | + | ||
| PTST-2 | GWQDLNSAW-NH2 | [ | 1075.47 | 1075.50 | + | + | |||||
| PTST-3 | APEKWAAFHGSWG-NH2 | [ | 1442.67 | 1441.83 | + | + | |||||
| PTST-4 | GWNDISSVWG-NH2 | [ | 1119.50 | 1120.93 | + | + | |||||
| PTST-5 | AWQDMSSAW-NH2 | [ | 1080.43 | 1080.67 | + | + | + | ||||
| PTST-6 | AWSALHGTW-NH2 | [ | 1027.49 | 1027.67 | + | + | + | ||||
|
| |||||||||||
| 15 | SGNP |
| IIFTPKL-NH2 | [ | D28810 | 830.53 | 830.78 | + | + | + | + |
|
| SVAKPQTHESLEFIPRL-NH2 | [ | 1951.05 | 1951.20 | + | + | + | ||||
|
| TMSFSPRL-NH2 | [ | 937.47 | 937.67 | + | + | + | ||||
|
| |||||||||||
| 16 | sNPF | sNPF-1 | SPSRRLRF-NH2 | [ | AB330419 | 1017.58 | 1017.45 | + | + | + | |
| sNPF-2 | TPVRLRF-NH2 | [ | 887.53 | 887.72 | + | + | + | ||||
| sNPF3 | APSMRLRF-NH2 | [ | 976.53 | 976.74 | + | + | + | ||||
|
| |||||||||||
| 17 | SIFamide | SIFamide | TYRKPPFNGSIF-NH2 | AB298923 | 1425.74 | 1425.60 | + | + | + | ||
|
| |||||||||||
| 18 | Sulfakinin | Sulfakinin | GDDTFDDYGHLRF-NH2 | AB362223 | 1556.65 | 1556.92 | + | + | + | ||
|
| |||||||||||
| 19 | Tachykinin | Tachykinin-1 | IPQGFLGMR-NH2 | AB298929 | 1017.54 | 1017.60 | + | + | |||
| Tachykinin-3 | APLGFTGVR-NH2 | 916.51 | 916.50 | + | + | + | |||||
| Tachykinin-4 | AANMHQFYGVR-NH2 | 1292.61 | 1292.48 | + | + | + | |||||
| Tachykinin-5 | PYDLSIRGKFIGVR-NH2 | 1619.91 | 1619.03 | + | + | ||||||
| Tachykinin-6 | GQMGFFGMR-NH2 | 1029.45 | 1029.74 | + | + | ||||||
Masses were calculated using ProteinProspector (University of California, San Francisco, CA, USA). Newly characterized peptides in this study.
The mature peptides of Bombyx mori from larvae CC-CA identified or assigned by MALDI-TOF MS.
| Number | Peptide clusters | Maturae peptide name | Amino acid sequence | Reference | Transcripts | Monoisotopic masses M+H]+ | Larvae CC-CA | |
|---|---|---|---|---|---|---|---|---|
| Calculated | Measured | |||||||
| 1 | AKH | AKH1(Q1) | QLTFTSSWG-NH2 | [ | AB298930 | 1025.48 | 1025.58 | + |
| AKH2(Q1) | QLTFTPGWGQ-NH2 | [ | AB298931 | 1133.55 | 1133.78 | + | ||
| AKH3(Q1) | QITFSRDWSG-NH2 | [ | AB298938 | 1195.56 | 1194.85 | + | ||
|
| ||||||||
| 2 | Allatostatin A | Allatostatin-2 | AYSYVSEYKRLPVYNFGL -NH2 | [ | AF309090 | 2168.09 | 2167.621 | + |
| Allatostatin-3 | SRPYLFGL-NH2 | [ | 951.52 | 951.41 | + | |||
| Allatostatin-4 | ARPYSFGL-NH2 | [ | 909.47 | 909.32 | + | |||
| Allatostatin-5 | ARMYSFGL-NH2 | [ | 943.46 | 943.46 | + | |||
| Allatostatin-6 | ARSYSFGL-NH2 | [ | 899.45 | 899.52 | + | |||
| Allatostatin-8(Q1) | QRDMHRFSFGL-NH2 | [ | 1392.67 | 1393.88 | + | |||
| Allatostatin-8 | pERDMHRFSFGL-NH2 | [ | 1375.7 | 1375.60 | + | |||
|
| ||||||||
| 3 | Bommo-AT | Bommo-AT | GFKNVEMMTARGF-NH2 | [ | AY970687 | 1486.71 | 1486.69 | + |
|
| ||||||||
| 4 | Bommo AST-C | AST-C(Q1) | QVRFRQCYFNPISCF-NH2 | [ | AB330418 | 1906.90 | 1960.96 | + |
|
| ||||||||
| 5 | BRFa | BRFa-1 | SAIDRSMIRF-NH2 | [ | AB234100 | 1194.62 | 1194.85 | + |
| BRFa-2 | SASFVRF-NH2 | [ | 812.42 | 812.42 | + | |||
| BRFa-3 | DPSFIRF-NH2 | [ | 880.44 | 880.48 | + | |||
| BRFa-4 | ARNHFIRL-NH2 | [ | 1025.59 | 1025.63 | + | |||
|
| ||||||||
| 6 | B-myosuppressin (BMS) | BMS | pEDVVHSFLRF-NH2 | [ | NM_001173411 | 1229.6 | 1229.54 | + |
| BMS(Q1) | QDVVHSFLRF-NH2 | Confirmed in this study | 1246.65 | 1246.55 | + | |||
|
| ||||||||
| 7 | CAPA/CAP2b | CAPA-PVK-1 | PDGVLNLYPFPRV-NH2 | AB362227 | 1485.80 | 1486.54 | + | |
| CAPA-PVK-2 | pELYAFPRV-NH2 | 975.50 | 975.71 | + | ||||
| CAPA-PVK-2(Q1) | QLYAFPRV-NH2 | 992.54 | 992.80 | + | ||||
|
| ||||||||
| 8 | CCAP | CCAP | PFCNAFTGC-NH2 | AB298937 | 958.37 | 956.42 | + | |
|
| ||||||||
| 9 | Corazonin | Corazonin | pETFQYSRGWTN-NH2 | Confirmed in this study | AB106876 | 1369.7 | 1369.57 | + |
| Corazonin(Q1) | QTFQYSRGWTN-NH2 | Confirmed in this study | 1386.63 | 1385.74 | + | |||
|
| ||||||||
| 10 | NPLP-1 | NPLP-1(LLH) | NIAALARNGLLH-NH2 | AB362222 | 1261.73 | 1261.57 | + | |
| NPLP-1(NSY) | NIATLAKNGYLRNSGANSY-NH2 | 2026.02 | 2027.19 | + | ||||
|
| ||||||||
| 11 | Orcokinin | Orcokinin-5 | YRPDYPMDEIDLSHFPVGS-NH2 | Confirmed in this study | AB298932 | 2237.01 | 2237.39 | + |
|
| ||||||||
| 12 | PTST | PTST-3 | APEKWAAFHGSWG-NH2 | [ | AB073553 | 1442.67 | 1441.83 | + |
| PTST-5 | AWQDMSSAW-NH2 | [ | 1080.43 | 1080.67 | + | |||
| PTST-6 | AWSALHGTW-NH2 | [ | 1027.49 | 1027.67 | + | |||
|
| ||||||||
| 13 | SGNP |
| IIFTPKL-NH2 | [ | D28810 | 830.53 | 830.78 | + |
|
| SVAKPQTHESLEFIPRL-NH2 | [ | 1951.05 | 1951.32 | + | |||
|
| TMSFSPRL-NH2 | [ | 937.47 | 937.67 | + | |||
|
| ||||||||
| 14 | sNPF | sNPF-1 | SPSRRLRF-NH2 | [ | AB330419 | 1017.58 | 1017.45 | + |
| sNPF-2 | TPVRLRF-NH2 | [ | 887.53 | 887.72 | + | |||
| sNPF3 | APSMRLRF-NH2 | [ | 976.53 | 976.74 | + | |||
|
| ||||||||
| 15 | Sulfakinin | Sulfakinin | GDDTFDDYGHLRF-NH2 | AB362223 | 1556.65 | 1556.92 | + | |
|
| ||||||||
| 16 | Tachykinin | Tachykinin-1 | IPQGFLGMR-NH2 | AB298929 | 1017.54 | 1017.60 | + | |
| Tachykinin-3 | APLGFTGVR-NH2 | 916.51 | 916.50 | + | ||||
| Tachykinin-4 | AANMHQFYGVR-NH2 | 1292.61 | 1292.48 | + | ||||
| Tachykinin-6 | GQMGFFGMR-NH2 | 1029.45 | 1029.74 | + | ||||
Masses were calculated using ProteinProspector (University of California, San Francisco, CA, USA). The mature peptide marked. Newly characterized peptides in this study.
Figure 1MALDI-TOF mass spectrum from separate fraction 30 of CC-CA in the fifth instar of B. mori.
Figure 3MALDI-TOF mass spectrum from separate fraction 29 of CC-CA in the fifth instar of B. mori.