Literature DB >> 23315811

Genetic linkage map of EST-SSR and SRAP markers in the endangered Chinese endemic herb Dendrobium (Orchidaceae).

J J Lu1, S Wang, H Y Zhao, J J Liu, H Z Wang.   

Abstract

Dendrobium officinale is an endangered orchid from southeast Asia that is known for its medicinal properties in traditional Chinese medicine. We constructed an integrated genetic linkage map of an F(1) population derived from an interspecific cross between D. officinale and D. aduncum (both, 2n = 38), using expressed sequence tag-simple sequence repeats (EST-SSR) and sequence-related amplified polymorphism (SRAP). A total of 349 polymorphic loci, including 261 SRAP loci and 88 EST-SSR loci, were identified for genetic linkage analysis. The software JoinMap 4.0 was used to construct the genetic maps. A total of 157 loci were arranged into 27 major linkage groups, each containing a minimum of four markers, and a further 23 markers were distributed to five triplets and four doublets, the frame map covered a total distance of 1580.4 cM, with a mean of 11.89 cM between adjacent markers. This primary map of the D. officinale and D. aduncum hybrid provides a basis for genetic studies and should facilitate future studies of medical traits mapping and marker-assisted selection in Dendrobium species breeding programs.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 23315811     DOI: 10.4238/2012.December.21.1

Source DB:  PubMed          Journal:  Genet Mol Res        ISSN: 1676-5680


  10 in total

1.  Genome wide association mapping of yield and various desirable agronomic traits in Rice.

Authors:  Muhammad Ashfaq; Abdul Rasheed; Muhammad Sajjad; Muhammad Ali; Bilal Rasool; Muhammad Arshad Javed; Sami Ul Allah; Shabnum Shaheen; Alia Anwar; Muhammad Shafiq Ahmad; Urooj Mubashar
Journal:  Mol Biol Rep       Date:  2022-08-08       Impact factor: 2.742

2.  RNA-Seq Provides Novel Genomic Resources for Noug (Guizotia abyssinica) and Reveals Microsatellite Frequency and Distribution in Its Transcriptome.

Authors:  Adane Gebeyehu; Cecilia Hammenhag; Kassahun Tesfaye; Ramesh R Vetukuri; Rodomiro Ortiz; Mulatu Geleta
Journal:  Front Plant Sci       Date:  2022-05-11       Impact factor: 6.627

Review 3.  Genome-wide researches and applications on Dendrobium.

Authors:  Shi-Gang Zheng; Ya-Dong Hu; Ruo-Xi Zhao; Shou Yan; Xue-Qin Zhang; Ting-Mei Zhao; Ze Chun
Journal:  Planta       Date:  2018-07-31       Impact factor: 4.116

4.  Development, Identification, and Application of a Germplasm Specific SCAR Marker for Dendrobium officinale Kimura et Migo.

Authors:  Kaixin Zheng; Yuchen Cai; Weijie Chen; Yadi Gao; Jingjing Jin; Huizhong Wang; Shangguo Feng; Jiangjie Lu
Journal:  Front Plant Sci       Date:  2021-05-14       Impact factor: 5.753

Review 5.  Post genomics era for orchid research.

Authors:  Wen-Chieh Tsai; Anne Dievart; Chia-Chi Hsu; Yu-Yun Hsiao; Shang-Yi Chiou; Hsin Huang; Hong-Hwa Chen
Journal:  Bot Stud       Date:  2017-12-12       Impact factor: 2.787

6.  Molecular identification and genetic diversity among Photorhabdus and Xenorhabdus isolates.

Authors:  Reda E A Moghaieb; Abdelhadi A Abdelhadi; Hanan A El-Sadawy; Nesreen A T Allam; Baiome Abdelmaguid Baiome; Mohamed H Soliman
Journal:  3 Biotech       Date:  2017-04-08       Impact factor: 2.406

7.  Construction of a genetic linkage map in Pyropia yezoensis (Bangiales, Rhodophyta) and QTL analysis of several economic traits of blades.

Authors:  Linbin Huang; Xinghong Yan
Journal:  PLoS One       Date:  2019-03-08       Impact factor: 3.240

8.  High-density genetic map and genome-wide association studies of aesthetic traits in Phalaenopsis orchids.

Authors:  Chia-Chi Hsu; Shu-Yun Chen; Shang-Yi Chiu; Cheng-Yuan Lai; Pei-Han Lai; Tariq Shehzad; Wen-Luan Wu; Wen-Huei Chen; Andrew H Paterson; Hong-Hwa Chen
Journal:  Sci Rep       Date:  2022-02-28       Impact factor: 4.996

9.  Development of SSR Markers and Assessment of Genetic Diversity in Medicinal Chrysanthemum morifolium Cultivars.

Authors:  Shangguo Feng; Renfeng He; Jiangjie Lu; Mengying Jiang; Xiaoxia Shen; Yan Jiang; Zhi'an Wang; Huizhong Wang
Journal:  Front Genet       Date:  2016-06-15       Impact factor: 4.599

10.  High-Density Genetic Map Construction and Stem Total Polysaccharide Content-Related QTL Exploration for Chinese Endemic Dendrobium (Orchidaceae).

Authors:  Jiangjie Lu; Yuyang Liu; Jing Xu; Ziwei Mei; Yujun Shi; Pengli Liu; Jianbo He; Xiaotong Wang; Yijun Meng; Shangguo Feng; Chenjia Shen; Huizhong Wang
Journal:  Front Plant Sci       Date:  2018-03-27       Impact factor: 5.753

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.