Literature DB >> 23315209

Analysis of dormant bud (Banjhi) specific transcriptome of tea (Camellia sinensis (L.) O. Kuntze) from cDNA library revealed dormancy-related genes.

Krishnaraj Thirugnanasambantham1, Gajjeraman Prabu, Senthilkumar Palanisamy, Suresh Ramraj Subhas Chandrabose, Abul Kalam Azad Mandal.   

Abstract

Bud dormancy is of ecological and economical interest due to its impact on tea (Camellia sinensis (L.) O. Kuntze) plant growth and yield. Growth regulation associated with dormancy is an essential element in plant's life cycle that leads to changes in expression of large number of genes. In order to identify and provide a picture of the transcriptome profile, cDNA library was constructed from dormant bud (banjhi) of tea. Sequence and gene ontology analysis of 3,500 clones, in many cases, enabled their functional categorization concerning the bud growth. Based on the cDNA library data, the putative role of identified genes from tea is discussed in relation to growth and dormancy, which includes morphogenesis, cellular differentiation, tropism, cell cycle, signaling, and various metabolic pathways. There was a higher representation of unknown processes such as unknown molecular functions (65.80 %), unknown biological processes (62.46 %), and unknown cellular components (67.42 %). However, these unknown transcripts represented a novel component of transcripts in tea plant bud growth and/or dormancy development. The identified transcripts and expressed sequence tags provides a valuable public resource and preliminary insights into the molecular mechanisms of bud dormancy regulation. Further, the findings will be the target of future expression experiments, particularly for further identification of dormancy-related genes in this species.

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Year:  2013        PMID: 23315209     DOI: 10.1007/s12010-012-0070-5

Source DB:  PubMed          Journal:  Appl Biochem Biotechnol        ISSN: 0273-2289            Impact factor:   2.926


  11 in total

1.  Comparative genomics analysis reveals gene family expansion and changes of expression patterns associated with natural adaptations of flowering time and secondary metabolism in yellow Camellia.

Authors:  Xinlei Li; Zhengqi Fan; Haobo Guo; Ning Ye; Tao Lyu; Wen Yang; Jie Wang; Jia-Tong Wang; Bin Wu; Jiyuan Li; Hengfu Yin
Journal:  Funct Integr Genomics       Date:  2018-06-12       Impact factor: 3.410

2.  Differential expression of microRNAs in dormant bud of tea [Camellia sinensis (L.) O. Kuntze].

Authors:  Anburaj Jeyaraj; Viswanathan Chandran; Prabu Gajjeraman
Journal:  Plant Cell Rep       Date:  2014-07       Impact factor: 4.570

3.  Synergistic effect of cytokinin and gibberellins stimulates release of dormancy in tea (Camellia sinensis (L.) O. Kuntze) bud.

Authors:  Krishnaraj Thirugnanasambantham; Gajjeraman Prabu; Abul Kalam Azad Mandal
Journal:  Physiol Mol Biol Plants       Date:  2020-04-21

4.  Biologically active Camellia oleifera protein nanoparticles for improving the tumor microenvironment and drug delivery.

Authors:  Xiaoping Qian; Tinghui Shen; Xiaoke Zhang; Chongzhi Wang; Weibo Cai; Rongshi Cheng; Xiqun Jiang
Journal:  Biomater Sci       Date:  2020-06-16       Impact factor: 6.843

5.  Gene co-expression network analysis reveals coordinated regulation of three characteristic secondary biosynthetic pathways in tea plant (Camellia sinensis).

Authors:  Yuling Tai; Chun Liu; Shuwei Yu; Hua Yang; Jiameng Sun; Chunxiao Guo; Bei Huang; Zhaoye Liu; Yi Yuan; Enhua Xia; Chaoling Wei; Xiaochun Wan
Journal:  BMC Genomics       Date:  2018-08-15       Impact factor: 3.969

6.  Transcriptomic and phytochemical analysis of the biosynthesis of characteristic constituents in tea (Camellia sinensis) compared with oil tea (Camellia oleifera).

Authors:  Yuling Tai; Chaoling Wei; Hua Yang; Liang Zhang; Qi Chen; Weiwei Deng; Shu Wei; Jing Zhang; Congbing Fang; Chitang Ho; Xiaochun Wan
Journal:  BMC Plant Biol       Date:  2015-08-07       Impact factor: 4.215

7.  Transcriptome Analysis Reveals Candidate Genes involved in Blister Blight defense in Tea (Camellia sinensis (L) Kuntze).

Authors:  Kuldip Jayaswall; Pallavi Mahajan; Gagandeep Singh; Rajni Parmar; Romit Seth; Aparnashree Raina; Mohit Kumar Swarnkar; Anil Kumar Singh; Ravi Shankar; Ram Kumar Sharma
Journal:  Sci Rep       Date:  2016-07-28       Impact factor: 4.379

8.  Comparative proteomics reveals the physiological differences between winter tender shoots and spring tender shoots of a novel tea (Camellia sinensis L.) cultivar evergrowing in winter.

Authors:  Shengjie Liu; Jiadong Gao; Zhongjian Chen; Xiaoyan Qiao; Hualin Huang; Baiyuan Cui; Qingfeng Zhu; Zhangyan Dai; Hualing Wu; Yayan Pan; Chengwei Yang; Jun Liu
Journal:  BMC Plant Biol       Date:  2017-11-20       Impact factor: 4.215

9.  Identification and characterization of microRNAs in tree peony during chilling induced dormancy release by high-throughput sequencing.

Authors:  Yuxi Zhang; Yanyan Wang; Xuekai Gao; Chunying Liu; Shupeng Gai
Journal:  Sci Rep       Date:  2018-03-14       Impact factor: 4.379

Review 10.  Unraveling the Roles of Regulatory Genes during Domestication of Cultivated Camellia: Evidence and Insights from Comparative and Evolutionary Genomics.

Authors:  Chao Yan; Ping Lin; Tao Lyu; Zhikang Hu; Zhengqi Fan; Xinlei Li; Xiaohua Yao; Jiyuan Li; Hengfu Yin
Journal:  Genes (Basel)       Date:  2018-10-10       Impact factor: 4.096

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