Literature DB >> 23314416

Likelihood-based population independent component analysis.

Ani Eloyan1, Ciprian M Crainiceanu, Brian S Caffo.   

Abstract

Independent component analysis (ICA) is a widely used technique for blind source separation, used heavily in several scientific research areas including acoustics, electrophysiology, and functional neuroimaging. We propose a scalable two-stage iterative true group ICA methodology for analyzing population level functional magnetic resonance imaging (fMRI) data where the number of subjects is very large. The method is based on likelihood estimators of the underlying source densities and the mixing matrix. As opposed to many commonly used group ICA algorithms, the proposed method does not require significant data reduction by a 2-fold singular value decomposition. In addition, the method can be applied to a large group of subjects since the memory requirements are not restrictive. The performance of our approach is compared with a commonly used group ICA algorithm via simulation studies. Furthermore, the proposed method is applied to a large collection of resting state fMRI datasets. The results show that established brain networks are well recovered by the proposed algorithm.

Entities:  

Keywords:  Functional MRI; Signal processing; Source separation

Mesh:

Year:  2013        PMID: 23314416      PMCID: PMC3677736          DOI: 10.1093/biostatistics/kxs055

Source DB:  PubMed          Journal:  Biostatistics        ISSN: 1465-4644            Impact factor:   5.899


  12 in total

1.  Spatial and temporal independent component analysis of functional MRI data containing a pair of task-related waveforms.

Authors:  V D Calhoun; T Adali; G D Pearlson; J J Pekar
Journal:  Hum Brain Mapp       Date:  2001-05       Impact factor: 5.038

2.  A method for making group inferences from functional MRI data using independent component analysis.

Authors:  V D Calhoun; T Adali; G D Pearlson; J J Pekar
Journal:  Hum Brain Mapp       Date:  2001-11       Impact factor: 5.038

3.  Independent component analysis based on nonparametric density estimation.

Authors:  Riccardo Boscolo; Hong Pan; Vwani P Roychowdhury
Journal:  IEEE Trans Neural Netw       Date:  2004-01

4.  Tensorial extensions of independent component analysis for multisubject FMRI analysis.

Authors:  C F Beckmann; S M Smith
Journal:  Neuroimage       Date:  2005-01-08       Impact factor: 6.556

5.  A unified framework for group independent component analysis for multi-subject fMRI data.

Authors:  Ying Guo; Giuseppe Pagnoni
Journal:  Neuroimage       Date:  2008-05-16       Impact factor: 6.556

6.  Toward discovery science of human brain function.

Authors:  Bharat B Biswal; Maarten Mennes; Xi-Nian Zuo; Suril Gohel; Clare Kelly; Steve M Smith; Christian F Beckmann; Jonathan S Adelstein; Randy L Buckner; Stan Colcombe; Anne-Marie Dogonowski; Monique Ernst; Damien Fair; Michelle Hampson; Matthew J Hoptman; James S Hyde; Vesa J Kiviniemi; Rolf Kötter; Shi-Jiang Li; Ching-Po Lin; Mark J Lowe; Clare Mackay; David J Madden; Kristoffer H Madsen; Daniel S Margulies; Helen S Mayberg; Katie McMahon; Christopher S Monk; Stewart H Mostofsky; Bonnie J Nagel; James J Pekar; Scott J Peltier; Steven E Petersen; Valentin Riedl; Serge A R B Rombouts; Bart Rypma; Bradley L Schlaggar; Sein Schmidt; Rachael D Seidler; Greg J Siegle; Christian Sorg; Gao-Jun Teng; Juha Veijola; Arno Villringer; Martin Walter; Lihong Wang; Xu-Chu Weng; Susan Whitfield-Gabrieli; Peter Williamson; Christian Windischberger; Yu-Feng Zang; Hong-Ying Zhang; F Xavier Castellanos; Michael P Milham
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-22       Impact factor: 11.205

7.  Population Value Decomposition, a Framework for the Analysis of Image Populations.

Authors:  Ciprian M Crainiceanu; Brian S Caffo; Sheng Luo; Vadim M Zipunnikov; Naresh M Punjabi
Journal:  J Am Stat Assoc       Date:  2011       Impact factor: 5.033

8.  An information-maximization approach to blind separation and blind deconvolution.

Authors:  A J Bell; T J Sejnowski
Journal:  Neural Comput       Date:  1995-11       Impact factor: 2.026

9.  Large Sample Group Independent Component Analysis of Functional Magnetic Resonance Imaging Using Anatomical Atlas-Based Reduction and Bootstrapped Clustering.

Authors:  Ariana Anderson; Jennifer Bramen; Pamela K Douglas; Agatha Lenartowicz; Andrew Cho; Chris Culbertson; Arthur L Brody; Alan L Yuille; Mark S Cohen
Journal:  Int J Imaging Syst Technol       Date:  2011-06       Impact factor: 2.000

10.  Independent component approach to the analysis of EEG recordings at early stages of depressive disorders.

Authors:  Vera A Grin-Yatsenko; Ineke Baas; Valery A Ponomarev; Juri D Kropotov
Journal:  Clin Neurophysiol       Date:  2009-12-16       Impact factor: 3.708

View more
  4 in total

1.  Brain Imaging Analysis.

Authors:  F Dubois Bowman
Journal:  Annu Rev Stat Appl       Date:  2014-01       Impact factor: 5.810

2.  A Parcellation Based Nonparametric Algorithm for Independent Component Analysis with Application to fMRI Data.

Authors:  Shanshan Li; Shaojie Chen; Chen Yue; Brian Caffo
Journal:  Front Neurosci       Date:  2016-01-29       Impact factor: 4.677

3.  Parallel group independent component analysis for massive fMRI data sets.

Authors:  Shaojie Chen; Lei Huang; Huitong Qiu; Mary Beth Nebel; Stewart H Mostofsky; James J Pekar; Martin A Lindquist; Ani Eloyan; Brian S Caffo
Journal:  PLoS One       Date:  2017-03-09       Impact factor: 3.240

4.  Group linear non-Gaussian component analysis with applications to neuroimaging.

Authors:  Yuxuan Zhao; David S Matteson; Stewart H Mostofsky; Mary Beth Nebel; Benjamin B Risk
Journal:  Comput Stat Data Anal       Date:  2022-02-22       Impact factor: 2.035

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.