Literature DB >> 23305817

Quantitative one-step RT-PCR assay for rapid and sensitive identification and titration of polioviruses in clinical specimens.

Majid Laassri1, Anthony Dipiazza, Bella Bidzhieva, Tatiana Zagorodnyaya, Konstantin Chumakov.   

Abstract

Rapid identification and quantitation of polioviruses in clinical specimens is important for surveillance and analysis of virus shedding by vaccine recipients, which could be used to assess the level of mucosal immunity. A quantitative one step RT-PCR was developed for identification and titration of all three poliovirus serotypes. The assay could be an alternative to the traditional procedure based on cell culture isolation and subsequent determination of poliovirus serotype and virus titration. The method is based on quantitative PCR performed with reverse transcription reaction in the same tube. The multiplex assay that quantifies all three serotypes of poliovirus was found to be highly specific, sensitive, and takes only one day to complete. Published by Elsevier B.V.

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Year:  2013        PMID: 23305817     DOI: 10.1016/j.jviromet.2012.12.015

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  8 in total

1.  Kinetics of poliovirus shedding following oral vaccination as measured by quantitative reverse transcription-PCR versus culture.

Authors:  Mami Taniuchi; Sharmin Begum; Md Jashim Uddin; James A Platts-Mills; Jie Liu; Beth D Kirkpatrick; Anwarul H Chowdhury; Khondoker M Jamil; Rashidul Haque; William A Petri; Eric R Houpt
Journal:  J Clin Microbiol       Date:  2014-11-05       Impact factor: 5.948

2.  Development of an efficient entire-capsid-coding-region amplification method for direct detection of poliovirus from stool extracts.

Authors:  Minetaro Arita; David R Kilpatrick; Tomofumi Nakamura; Cara C Burns; David Bukbuk; Soji B Oderinde; M Steven Oberste; Olen M Kew; Mark A Pallansch; Hiroyuki Shimizu
Journal:  J Clin Microbiol       Date:  2014-10-22       Impact factor: 5.948

3.  Development of poliovirus extraction method from stool extracts by using magnetic nanoparticles sensitized with soluble poliovirus receptor.

Authors:  Minetaro Arita
Journal:  J Clin Microbiol       Date:  2013-05-22       Impact factor: 5.948

4.  Detection of Emerging Vaccine-Related Polioviruses by Deep Sequencing.

Authors:  Malaya K Sahoo; Marisa Holubar; ChunHong Huang; Alisha Mohamed-Hadley; Yuanyuan Liu; Jesse J Waggoner; Stephanie B Troy; Lourdes Garcia-Garcia; Leticia Ferreyra-Reyes; Yvonne Maldonado; Benjamin A Pinsky
Journal:  J Clin Microbiol       Date:  2017-05-03       Impact factor: 5.948

5.  Comparison of culture, single and multiplex real-time PCR for detection of Sabin poliovirus shedding in recently vaccinated Indian children.

Authors:  Sidhartha Giri; Anand K Rajan; Nirmal Kumar; Pavithra Dhanapal; Jayalakshmi Venkatesan; Miren Iturriza-Gomara; Mami Taniuchi; Jacob John; Asha Mary Abraham; Gagandeep Kang
Journal:  J Med Virol       Date:  2017-03-06       Impact factor: 2.327

6.  Rapid and Sensitive Direct Detection and Identification of Poliovirus from Stool and Environmental Surveillance Samples by Use of Nanopore Sequencing.

Authors:  Javier Martin; Nicholas Grassly; Alexander G Shaw; Manasi Majumdar; Catherine Troman; Áine O'Toole; Blossom Benny; Dilip Abraham; Ira Praharaj; Gagandeep Kang; Salmaan Sharif; Muhammad Masroor Alam; Shahzad Shaukat; Mehar Angez; Adnan Khurshid; Nayab Mahmood; Yasir Arshad; Lubna Rehman; Ghulam Mujtaba; Ribqa Akthar; Muhammad Salman; Dimitra Klapsa; Yara Hajarha; Humayun Asghar; Ananda Bandyopadhyay; Andrew Rambaut
Journal:  J Clin Microbiol       Date:  2020-08-24       Impact factor: 5.948

7.  Multiplex PCR-based titration (MPBT) assay for determination of infectious titers of the three Sabin strains of live poliovirus vaccine.

Authors:  Hasmik Manukyan; Elvira Rodionova; Tatiana Zagorodnyaya; Tsai-Lien Lin; Konstantin Chumakov; Majid Laassri
Journal:  Virol J       Date:  2019-10-28       Impact factor: 4.099

8.  Development of a Quantitative One-Step RT-PCR Method for the Detection of Sabin 2 Virus Contamination in a Novel Oral Poliovirus Vaccine Type 2.

Authors:  Hasmik Manukyan; Erman Tritama; Rahnuma Wahid; Azeem Ansari; John Konz; Konstantin Chumakov; Majid Laassri
Journal:  Vaccines (Basel)       Date:  2021-06-23
  8 in total

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