Literature DB >> 23304314

Learning to predict post-hospitalization VTE risk from EHR data.

Emily Kawaler1, Alexander Cobian, Peggy Peissig, Deanna Cross, Steve Yale, Mark Craven.   

Abstract

We consider the task of predicting which patients are most at risk for post-hospitalization venothromboembolism (VTE) using information automatically elicited from an EHR. Given a set of cases and controls, we use machine-learning methods to induce models for making these predictions. Our empirical evaluation of this approach offers a number of interesting and important conclusions. We identify several risk factors for VTE that were not previously recognized. We show that machine-learning methods are able to induce models that identify high-risk patients with accuracy that exceeds previously developed scoring models for VTE. Additionally, we show that, even without having prior knowledge about relevant risk factors, we are able to learn accurate models for this task.

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Mesh:

Year:  2012        PMID: 23304314      PMCID: PMC3540493     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  18 in total

1.  Prediction modeling using EHR data: challenges, strategies, and a comparison of machine learning approaches.

Authors:  Jionglin Wu; Jason Roy; Walter F Stewart
Journal:  Med Care       Date:  2010-06       Impact factor: 2.983

2.  Triggers of hospitalization for venous thromboembolism.

Authors:  Mary A M Rogers; Deborah A Levine; Neil Blumberg; Scott A Flanders; Vineet Chopra; Kenneth M Langa
Journal:  Circulation       Date:  2012-04-03       Impact factor: 29.690

3.  Computer surveillance of patients at high risk for and with venous thromboembolism.

Authors:  R Scott Evans; James F Lloyd; Valerie T Aston; Scott C Woller; Jacob S Tripp; C Greg Elliott; Scott M Stevens
Journal:  AMIA Annu Symp Proc       Date:  2010-11-13

4.  Combining PubMed knowledge and EHR data to develop a weighted bayesian network for pancreatic cancer prediction.

Authors:  Di Zhao; Chunhua Weng
Journal:  J Biomed Inform       Date:  2011-05-27       Impact factor: 6.317

5.  Predictive and associative models to identify hospitalized medical patients at risk for VTE.

Authors:  Alex C Spyropoulos; Frederick A Anderson; Gordon FitzGerald; Herve Decousus; Mario Pini; Beng H Chong; Rainer B Zotz; Jean-François Bergmann; Victor Tapson; James B Froehlich; Manuel Monreal; Geno J Merli; Ricardo Pavanello; Alexander G G Turpie; Mashio Nakamura; Franco Piovella; Ajay K Kakkar; Frederick A Spencer
Journal:  Chest       Date:  2011-03-24       Impact factor: 9.410

6.  Predicting virologic failure in an HIV clinic.

Authors:  Gregory K Robbins; Kristin L Johnson; Yuchiao Chang; Katherine E Jackson; Paul E Sax; James B Meigs; Kenneth A Freedberg
Journal:  Clin Infect Dis       Date:  2010-03-01       Impact factor: 9.079

7.  Utility of commonly captured data from an EHR to identify hospitalized patients at risk for clinical deterioration.

Authors:  Abel Kho; David Rotz; Kinan Alrahi; Wendy Cárdenas; Kristin Ramsey; David Liebovitz; Gary Noskin; Chuck Watts
Journal:  AMIA Annu Symp Proc       Date:  2007-10-11

8.  Predicting hospital-acquired infections by scoring system with simple parameters.

Authors:  Ying-Jui Chang; Min-Li Yeh; Yu-Chuan Li; Chien-Yeh Hsu; Chao-Cheng Lin; Meng-Shiuan Hsu; Wen-Ta Chiu
Journal:  PLoS One       Date:  2011-08-24       Impact factor: 3.240

9.  Development and validation of risk prediction algorithm (QThrombosis) to estimate future risk of venous thromboembolism: prospective cohort study.

Authors:  Julia Hippisley-Cox; Carol Coupland
Journal:  BMJ       Date:  2011-08-16

10.  Predicting 6-year mortality risk in patients with type 2 diabetes.

Authors:  Brian J Wells; Anil Jain; Susana Arrigain; Changhong Yu; Wayne A Rosenkrans; Michael W Kattan
Journal:  Diabetes Care       Date:  2008-09-22       Impact factor: 17.152

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  18 in total

1.  Using Anchors to Estimate Clinical State without Labeled Data.

Authors:  Yoni Halpern; Youngduck Choi; Steven Horng; David Sontag
Journal:  AMIA Annu Symp Proc       Date:  2014-11-14

2.  An Empirical Study for Impacts of Measurement Errors on EHR based Association Studies.

Authors:  Rui Duan; Ming Cao; Yonghui Wu; Jing Huang; Joshua C Denny; Hua Xu; Yong Chen
Journal:  AMIA Annu Symp Proc       Date:  2017-02-10

Review 3.  Text Mining for Precision Medicine: Bringing Structure to EHRs and Biomedical Literature to Understand Genes and Health.

Authors:  Michael Simmons; Ayush Singhal; Zhiyong Lu
Journal:  Adv Exp Med Biol       Date:  2016       Impact factor: 2.622

4.  Relational machine learning for electronic health record-driven phenotyping.

Authors:  Peggy L Peissig; Vitor Santos Costa; Michael D Caldwell; Carla Rottscheit; Richard L Berg; Eneida A Mendonca; David Page
Journal:  J Biomed Inform       Date:  2014-07-15       Impact factor: 6.317

Review 5.  Opportunities and challenges in developing risk prediction models with electronic health records data: a systematic review.

Authors:  Benjamin A Goldstein; Ann Marie Navar; Michael J Pencina; John P A Ioannidis
Journal:  J Am Med Inform Assoc       Date:  2016-05-17       Impact factor: 4.497

6.  Improving diagnostic recognition of primary hyperparathyroidism with machine learning.

Authors:  Yash R Somnay; Mark Craven; Kelly L McCoy; Sally E Carty; Tracy S Wang; Caprice C Greenberg; David F Schneider
Journal:  Surgery       Date:  2016-12-15       Impact factor: 3.982

7.  Hybrid bag of approaches to characterize selection criteria for cohort identification.

Authors:  V G Vinod Vydiswaran; Asher Strayhorn; Xinyan Zhao; Phil Robinson; Mahesh Agarwal; Erin Bagazinski; Madia Essiet; Bradley E Iott; Hyeon Joo; PingJui Ko; Dahee Lee; Jin Xiu Lu; Jinghui Liu; Adharsh Murali; Koki Sasagawa; Tianshi Wang; Nalingna Yuan
Journal:  J Am Med Inform Assoc       Date:  2019-11-01       Impact factor: 4.497

8.  Text Mining of the Electronic Health Record: An Information Extraction Approach for Automated Identification and Subphenotyping of HFpEF Patients for Clinical Trials.

Authors:  Siddhartha R Jonnalagadda; Abhishek K Adupa; Ravi P Garg; Jessica Corona-Cox; Sanjiv J Shah
Journal:  J Cardiovasc Transl Res       Date:  2017-06-05       Impact factor: 4.132

9.  Adapting machine learning techniques to censored time-to-event health record data: A general-purpose approach using inverse probability of censoring weighting.

Authors:  David M Vock; Julian Wolfson; Sunayan Bandyopadhyay; Gediminas Adomavicius; Paul E Johnson; Gabriela Vazquez-Benitez; Patrick J O'Connor
Journal:  J Biomed Inform       Date:  2016-03-16       Impact factor: 6.317

10.  Identifying patterns and predictors of lifestyle modification in electronic health record documentation using statistical and machine learning methods.

Authors:  Kimberly Shoenbill; Yiqiang Song; Mark Craven; Heather Johnson; Maureen Smith; Eneida A Mendonca
Journal:  Prev Med       Date:  2020-03-14       Impact factor: 4.018

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