Literature DB >> 23304312

Designing and evaluating a clustering system for organizing and integrating patient drug outcomes in personal health messages.

Yunliang Jiang1, Qingzi Vera Liao, Qian Cheng, Richard B Berlin, Bruce R Schatz.   

Abstract

Patient outcomes to drugs vary, but physicians currently have little data about individual responses. We designed a comprehensive system to organize and integrate patient outcomes utilizing semantic analysis, which groups large collections of personal comments into a series of topics. A prototype implementation was built to extract situational evidences by filtering and digesting user comments provided by patients. Our methods do not require extensive training or dictionaries, while categorizing comments based on expert opinions from standard source, or patient-specified categories. This system has been tested with sample health messages from our unique dataset from Yahoo! Groups, containing 12M personal messages from 27K public groups in Health and Wellness. We have performed an extensive evaluation of the clustering results with medical students. Evaluated results show high quality of labeled clustering, promising an effective automatic system for discovering patient outcomes from large volumes of health information.

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Mesh:

Year:  2012        PMID: 23304312      PMCID: PMC3540422     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  17 in total

1.  A multi-site content analysis of social history information in clinical notes.

Authors:  Elizabeth S Chen; Sharad Manaktala; Indra Neil Sarkar; Genevieve B Melton
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22

2.  Predicting adverse drug events from personal health messages.

Authors:  Brant W Chee; Richard Berlin; Bruce Schatz
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22

3.  Assessing and managing eye injuries.

Authors: 
Journal:  Community Eye Health       Date:  2005-10

4.  Methods for building sense inventories of abbreviations in clinical notes.

Authors:  Hua Xu; Peter D Stetson; Carol Friedman
Journal:  J Am Med Inform Assoc       Date:  2008-10-24       Impact factor: 4.497

5.  Measuring population health using personal health messages.

Authors:  Brant Chee; Richard Berlin; Bruce Schatz
Journal:  AMIA Annu Symp Proc       Date:  2009-11-14

6.  Beyond genes, proteins, and abstracts: Identifying scientific claims from full-text biomedical articles.

Authors:  Catherine Blake
Journal:  J Biomed Inform       Date:  2009-11-10       Impact factor: 6.317

7.  Dialect topic modeling for improved consumer medical search.

Authors:  Steven P Crain; Shuang-Hong Yang; Hongyuan Zha; Yu Jiao
Journal:  AMIA Annu Symp Proc       Date:  2010-11-13

8.  FigSum: automatically generating structured text summaries for figures in biomedical literature.

Authors:  Shashank Agarwal; Hong Yu
Journal:  AMIA Annu Symp Proc       Date:  2009-11-14

9.  Use of topic modeling for recommending relevant education material to diabetic patients.

Authors:  Sasikiran Kandula; Dorothy Curtis; Brent Hill; Qing Zeng-Treitler
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22

10.  Metformin decreases food consumption and induces weight loss in subjects with obesity with type II non-insulin-dependent diabetes.

Authors:  A Lee; J E Morley
Journal:  Obes Res       Date:  1998-01
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  4 in total

Review 1.  Adverse Drug Reaction Identification and Extraction in Social Media: A Scoping Review.

Authors:  Jérémy Lardon; Redhouane Abdellaoui; Florelle Bellet; Hadyl Asfari; Julien Souvignet; Nathalie Texier; Marie-Christine Jaulent; Marie-Noëlle Beyens; Anita Burgun; Cédric Bousquet
Journal:  J Med Internet Res       Date:  2015-07-10       Impact factor: 5.428

Review 2.  National Surveys of Population Health: Big Data Analytics for Mobile Health Monitors.

Authors:  Bruce R Schatz
Journal:  Big Data       Date:  2015-12-01       Impact factor: 2.128

3.  The Adverse Drug Reactions from Patient Reports in Social Media Project: Five Major Challenges to Overcome to Operationalize Analysis and Efficiently Support Pharmacovigilance Process.

Authors:  Cedric Bousquet; Badisse Dahamna; Sylvie Guillemin-Lanne; Stefan J Darmoni; Carole Faviez; Charles Huot; Sandrine Katsahian; Vincent Leroux; Suzanne Pereira; Christophe Richard; Stéphane Schück; Julien Souvignet; Agnès Lillo-Le Louët; Nathalie Texier
Journal:  JMIR Res Protoc       Date:  2017-09-21

4.  Evaluation of clustering and topic modeling methods over health-related tweets and emails.

Authors:  Juan Antonio Lossio-Ventura; Sergio Gonzales; Juandiego Morzan; Hugo Alatrista-Salas; Tina Hernandez-Boussard; Jiang Bian
Journal:  Artif Intell Med       Date:  2021-05-07       Impact factor: 7.011

  4 in total

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