Literature DB >> 23303722

Infrared imaging as a cancer diagnostic tool: introducing a new concept of spectral barcodes for identifying molecular changes in colon tumors.

Jayakrupakar Nallala1, Olivier Piot, Marie-Danièle Diebold, Cyril Gobinet, Olivier Bouché, Michel Manfait, Ganesh D Sockalingum.   

Abstract

Complementary diagnostic methods to conventional histopathology are under scrutiny for various types of cancers for rapid and molecular level diagnostics. In this perspective, a biophotonic approach based on infrared spectral micro-imaging combined with multivariate statistical analysis has been implemented on colon tissues. The ability of infrared imaging to investigate the intrinsic biochemical features of cells and tissues has been exploited to develop a new concept of spectral bar coding. To implement this concept, 10 frozen colon tissue samples (five nontumoral and tumoral pairs from five patients) were imaged using infrared spectral micro-imaging in a nondestructive manner. The spectral images were processed by a multivariate clustering method to identify the histological organization in a label-free manner. Spectral information from the epithelial components was then automatically recovered on the basis of their intrinsic biochemical composition, and compared using a statistical method (Mann-Whitney U-test) to construct spectral barcodes specific to each patient. The spectral barcodes representing the discriminant infrared spectral wavenumbers (900-1,800 cm(-1) ) enabled characterization of some of the malignancy-associated biochemical alterations associated with mucin, nucleotides, carbohydrates, and protein regions. This approach not only allowed the identification of common biochemical alterations among all the colon cancer patients, but also revealed a difference of gradient within individual patients. This new concept of spectral bar coding gives insight into the potential of infrared spectral micro-imaging as a complementary diagnostic tool to conventional histopathology, for biochemical level understanding of malignancy in colon cancers in an objective and label-free manner.
Copyright © 2013 International Society for Advancement of Cytometry.

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Year:  2013        PMID: 23303722     DOI: 10.1002/cyto.a.22249

Source DB:  PubMed          Journal:  Cytometry A        ISSN: 1552-4922            Impact factor:   4.355


  10 in total

Review 1.  Label-free molecular imaging of the kidney.

Authors:  Boone M Prentice; Richard M Caprioli; Vincent Vuiblet
Journal:  Kidney Int       Date:  2017-07-24       Impact factor: 10.612

Review 2.  Emerging Themes in Image Informatics and Molecular Analysis for Digital Pathology.

Authors:  Rohit Bhargava; Anant Madabhushi
Journal:  Annu Rev Biomed Eng       Date:  2016-07-11       Impact factor: 9.590

3.  Colon Cancer Grading Using Infrared Spectroscopic Imaging-Based Deep Learning.

Authors:  Saumya Tiwari; Kianoush Falahkheirkhah; Georgina Cheng; Rohit Bhargava
Journal:  Appl Spectrosc       Date:  2022-03-25       Impact factor: 3.588

4.  Computational chemical imaging for cardiovascular pathology: chemical microscopic imaging accurately determines cardiac transplant rejection.

Authors:  Saumya Tiwari; Vijaya B Reddy; Rohit Bhargava; Jaishankar Raman
Journal:  PLoS One       Date:  2015-05-01       Impact factor: 3.240

Review 5.  Native extracellular matrix: a new scaffolding platform for repair of damaged muscle.

Authors:  Laura Teodori; Alessandra Costa; Rosa Marzio; Barbara Perniconi; Dario Coletti; Sergio Adamo; Bhuvanesh Gupta; Attila Tarnok
Journal:  Front Physiol       Date:  2014-06-16       Impact factor: 4.566

6.  An Innovative Platform Merging Elemental Analysis and Ftir Imaging for Breast Tissue Analysis.

Authors:  Mohamed H M Ali; Fazle Rakib; Khalid Al-Saad; Rafif Al-Saady; Erik Goormaghtigh
Journal:  Sci Rep       Date:  2019-07-08       Impact factor: 4.379

7.  Infrared Spectroscopic Analysis in the Differentiation of Epithelial Misplacement From Adenocarcinoma in Sigmoid Colonic Adenomatous Polyps.

Authors:  Jayakrupakar Nallala; Rebecca Griggs; Gavin R Lloyd; Nick Stone; Neil A Shepherd
Journal:  Clin Pathol       Date:  2022-04-28

8.  Using Fourier transform IR spectroscopy to analyze biological materials.

Authors:  Matthew J Baker; Júlio Trevisan; Paul Bassan; Rohit Bhargava; Holly J Butler; Konrad M Dorling; Peter R Fielden; Simon W Fogarty; Nigel J Fullwood; Kelly A Heys; Caryn Hughes; Peter Lasch; Pierre L Martin-Hirsch; Blessing Obinaju; Ganesh D Sockalingum; Josep Sulé-Suso; Rebecca J Strong; Michael J Walsh; Bayden R Wood; Peter Gardner; Francis L Martin
Journal:  Nat Protoc       Date:  2014-07-03       Impact factor: 13.491

9.  New insights into spectral histopathology: infrared-based scoring of tumour aggressiveness of squamous cell lung carcinomas.

Authors:  Vincent Gaydou; Myriam Polette; Cyril Gobinet; Claire Kileztky; Jean-François Angiboust; Philippe Birembaut; Vincent Vuiblet; Olivier Piot
Journal:  Chem Sci       Date:  2019-03-05       Impact factor: 9.825

Review 10.  Vibrational Spectroscopy Saliva Profiling as Biometric Tool for Disease Diagnostics: A Systematic Literature.

Authors:  Stéphane Derruau; Julien Robinet; Valérie Untereiner; Olivier Piot; Ganesh D Sockalingum; Sandrine Lorimier
Journal:  Molecules       Date:  2020-09-10       Impact factor: 4.411

  10 in total

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