Literature DB >> 23302932

Automating the construction of gene ontologies.

Kara Dolinski1, David Botstein.   

Abstract

Mesh:

Year:  2013        PMID: 23302932     DOI: 10.1038/nbt.2476

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


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  3 in total

1.  Gene ontology: tool for the unification of biology. The Gene Ontology Consortium.

Authors:  M Ashburner; C A Ball; J A Blake; D Botstein; H Butler; J M Cherry; A P Davis; K Dolinski; S S Dwight; J T Eppig; M A Harris; D P Hill; L Issel-Tarver; A Kasarskis; S Lewis; J C Matese; J E Richardson; M Ringwald; G M Rubin; G Sherlock
Journal:  Nat Genet       Date:  2000-05       Impact factor: 38.330

2.  Ontology engineering.

Authors:  Gil Alterovitz; Michael Xiang; David P Hill; Jane Lomax; Jonathan Liu; Michael Cherkassky; Jonathan Dreyfuss; Chris Mungall; Midori A Harris; Mary E Dolan; Judith A Blake; Marco F Ramoni
Journal:  Nat Biotechnol       Date:  2010-02       Impact factor: 54.908

3.  A gene ontology inferred from molecular networks.

Authors:  Janusz Dutkowski; Michael Kramer; Michal A Surma; Rama Balakrishnan; J Michael Cherry; Nevan J Krogan; Trey Ideker
Journal:  Nat Biotechnol       Date:  2013-01       Impact factor: 54.908

  3 in total
  4 in total

1.  Minimal metabolic pathway structure is consistent with associated biomolecular interactions.

Authors:  Aarash Bordbar; Harish Nagarajan; Nathan E Lewis; Haythem Latif; Ali Ebrahim; Stephen Federowicz; Jan Schellenberger; Bernhard O Palsson
Journal:  Mol Syst Biol       Date:  2014-07-01       Impact factor: 11.429

2.  DECODE: an integrated differential co-expression and differential expression analysis of gene expression data.

Authors:  Thomas W H Lui; Nancy B Y Tsui; Lawrence W C Chan; Cesar S C Wong; Parco M F Siu; Benjamin Y M Yung
Journal:  BMC Bioinformatics       Date:  2015-05-31       Impact factor: 3.169

3.  Progress and challenges in the computational prediction of gene function using networks: 2012-2013 update.

Authors:  Paul Pavlidis; Jesse Gillis
Journal:  F1000Res       Date:  2013-10-31

4.  Inferring gene ontologies from pairwise similarity data.

Authors:  Michael Kramer; Janusz Dutkowski; Michael Yu; Vineet Bafna; Trey Ideker
Journal:  Bioinformatics       Date:  2014-06-15       Impact factor: 6.937

  4 in total

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