Literature DB >> 23300030

The design and analysis of parallel experiments to produce structurally identifiable models.

S Y Amy Cheung1, James W T Yates, Leon Aarons.   

Abstract

Pharmacokinetic analysis in humans using compartmental models is restricted with respect to the estimation of parameter values. This is because the experimenter usually is only able to apply inputs and observations in a very small number of compartments in the system. This has implications for the structural identifiability of such systems and consequently limits the complexity and mechanistic relevance of the models that may be applied to such experiments. A number of strategies are presented whereby models are rendered globally identifiable by considering a series of experiments in parallel. Examples are taken from the pharmacokinetic literature and analysed using this parallel experiment methodology. It is concluded that considering a series of pharmacokinetic experiments where some, but not all, of the parameters may be shared across the experiments can improve the identifiability of some compartmental models.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23300030     DOI: 10.1007/s10928-012-9291-z

Source DB:  PubMed          Journal:  J Pharmacokinet Pharmacodyn        ISSN: 1567-567X            Impact factor:   2.745


  7 in total

1.  Urinary excretion kinetics for evaluation of drug absorption. I. Solution rate limited and nonsolution rate limited absorption of aspirin and benzyl penicillin; absorption rate of sulfaethylthiadiazole.

Authors:  E NELSON; I SCHALDEMOSE
Journal:  J Am Pharm Assoc Am Pharm Assoc       Date:  1959-09

2.  Controllability, observability and structural identifiability of multi input and multi output biological compartmental systems.

Authors:  C Cobelli; G Romanin-Jacur
Journal:  IEEE Trans Biomed Eng       Date:  1976-03       Impact factor: 4.538

3.  Pharmacokinetics of intravenous N-acetylcysteine in men at rest and during exercise.

Authors:  Malcolm Brown; Andrew Bjorksten; Ivan Medved; Michael McKenna
Journal:  Eur J Clin Pharmacol       Date:  2004-11-20       Impact factor: 2.953

4.  A minimal input-output configuration for a priori identifiability of a compartmental model of leucine metabolism.

Authors:  M P Saccomani; C Cobelli
Journal:  IEEE Trans Biomed Eng       Date:  1993-08       Impact factor: 4.538

5.  Identifiable pharmacokinetic models: the role of extra inputs and measurements.

Authors:  K R Godfrey; R P Jones; R F Brown
Journal:  J Pharmacokinet Biopharm       Date:  1980-12

6.  Physiologically based modelling of inhibition of metabolism and assessment of the relative potency of drug and metabolite: dextromethorphan vs. dextrorphan using quinidine inhibition.

Authors:  A A Moghadamnia; A Rostami-Hodjegan; R Abdul-Manap; C E Wright; A H Morice; G T Tucker
Journal:  Br J Clin Pharmacol       Date:  2003-07       Impact factor: 4.335

7.  Influence of anesthetic regimens on the intestinal absorption of 5-fluorouracil in rats.

Authors:  H Yuasa; K Matsuda; J Watanabe
Journal:  Biol Pharm Bull       Date:  1995-05       Impact factor: 2.233

  7 in total
  9 in total

1.  A confidence building exercise in data and identifiability: Modeling cancer chemotherapy as a case study.

Authors:  Marisa C Eisenberg; Harsh V Jain
Journal:  J Theor Biol       Date:  2017-07-19       Impact factor: 2.691

2.  Deterministic identifiability of population pharmacokinetic and pharmacokinetic-pharmacodynamic models.

Authors:  Vijay K Siripuram; Daniel F B Wright; Murray L Barclay; Stephen B Duffull
Journal:  J Pharmacokinet Pharmacodyn       Date:  2017-06-13       Impact factor: 2.745

3.  Structural identifiability for mathematical pharmacology: models of myelosuppression.

Authors:  Neil D Evans; S Y Amy Cheung; James W T Yates
Journal:  J Pharmacokinet Pharmacodyn       Date:  2018-02-02       Impact factor: 2.745

4.  Parameter Identifiability of Fundamental Pharmacodynamic Models.

Authors:  David L I Janzén; Linnéa Bergenholm; Mats Jirstrand; Joanna Parkinson; James Yates; Neil D Evans; Michael J Chappell
Journal:  Front Physiol       Date:  2016-12-05       Impact factor: 4.566

Review 5.  Physiologically Based Pharmacokinetic Model Qualification and Reporting Procedures for Regulatory Submissions: A Consortium Perspective.

Authors:  Mohamad Shebley; Punam Sandhu; Arian Emami Riedmaier; Masoud Jamei; Rangaraj Narayanan; Aarti Patel; Sheila Annie Peters; Venkatesh Pilla Reddy; Ming Zheng; Loeckie de Zwart; Maud Beneton; Francois Bouzom; Jun Chen; Yuan Chen; Yumi Cleary; Christiane Collins; Gemma L Dickinson; Nassim Djebli; Heidi J Einolf; Iain Gardner; Felix Huth; Faraz Kazmi; Feras Khalil; Jing Lin; Aleksandrs Odinecs; Chirag Patel; Haojing Rong; Edgar Schuck; Pradeep Sharma; Shu-Pei Wu; Yang Xu; Shinji Yamazaki; Kenta Yoshida; Malcolm Rowland
Journal:  Clin Pharmacol Ther       Date:  2018-02-02       Impact factor: 6.875

6.  A Novel Physiologically Based Model of Creatinine Renal Disposition to Integrate Current Knowledge of Systems Parameters and Clinical Observations.

Authors:  Daniel Scotcher; Vikram Arya; Xinning Yang; Ping Zhao; Lei Zhang; Shiew-Mei Huang; Amin Rostami-Hodjegan; Aleksandra Galetin
Journal:  CPT Pharmacometrics Syst Pharmacol       Date:  2020-05-22

7.  Dosing of Ceftriaxone and Metronidazole for Children With Severe Acute Malnutrition.

Authors:  Joseph F Standing; Martin O Ongas; Caroline Ogwang; Nancy Kagwanja; Sheila Murunga; Shalton Mwaringa; Rehema Ali; Neema Mturi; Moline Timbwa; Christine Manyasi; Laura Mwalekwa; Victor L Bandika; Bernhards Ogutu; Joseph Waichungo; Karin Kipper; James A Berkley
Journal:  Clin Pharmacol Ther       Date:  2018-04-19       Impact factor: 6.875

Review 8.  Quality Assurance of PBPK Modeling Platforms and Guidance on Building, Evaluating, Verifying and Applying PBPK Models Prudently under the Umbrella of Qualification: Why, When, What, How and By Whom?

Authors:  Sebastian Frechen; Amin Rostami-Hodjegan
Journal:  Pharm Res       Date:  2022-04-20       Impact factor: 4.580

9.  Determination of parameter identifiability in nonlinear biophysical models: A Bayesian approach.

Authors:  Keegan E Hines; Thomas R Middendorf; Richard W Aldrich
Journal:  J Gen Physiol       Date:  2014-02-10       Impact factor: 4.086

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.