Literature DB >> 23299675

High-throughput, noninvasive imaging of root systems.

Anjali S Iyer-Pascuzzi1, Paul R Zurek, Philip N Benfey.   

Abstract

Root systems are complex structures key to plant health. The three-dimensional distribution of the root system, known as the root architecture, is important for optimal uptake of water and nutrients, as well as anchorage in the soil. Despite the importance of root systems, little is known about the genes that control root architecture, in part because of the difficulty of non-destructively viewing root systems. The Benfey lab has developed a gel-based imaging method to non-invasively examine root system architecture over time. Root systems of a variety of plant species can be quickly imaged daily or weekly. The platform is relatively inexpensive, high-throughput, and is ideally suited for researchers aiming to understand the genetic control of root architecture. Here we describe the application of this method to rice and maize root systems.

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Year:  2013        PMID: 23299675     DOI: 10.1007/978-1-62703-221-6_11

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  3 in total

1.  Tree Topology Estimation.

Authors:  Rolando Estrada; Carlo Tomasi; Scott C Schmidler; Sina Farsiu
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2015-08       Impact factor: 6.226

2.  Image-Based Analysis to Dissect Vertical Distribution and Horizontal Asymmetry of Conspecific Root System Interactions in Response to Planting Densities, Nutrients and Root Exudates in Arabidopsis thaliana.

Authors:  Jane Geisler-Lee; Xian Liu; Wei Rang; Jayanthan Raveendiran; Marisa Blake Szubryt; David John Gibson; Matt Geisler; Qiang Cheng
Journal:  Plants (Basel)       Date:  2017-10-11

3.  Root system architecture analysis in Mesembryanthemum crystallinum (ice plant) seedlings reveals characteristic root halotropic response.

Authors:  Mayuko Otsuka; Hikaru Kato; Shyota Yamada; Tatsuhiko Nakayama; Satomi Sakaoka; Atsushi Morikami; Hironaka Tsukagoshi
Journal:  Biol Open       Date:  2021-03-29       Impact factor: 2.643

  3 in total

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