Literature DB >> 23297926

A three-parameter model for classifying anurans into four genera based on advertisement calls.

Bruno Gingras1, William Tecumseh Fitch.   

Abstract

The vocalizations of anurans are innate in structure and may therefore contain indicators of phylogenetic history. Thus, advertisement calls of species which are more closely related phylogenetically are predicted to be more similar than those of distant species. This hypothesis was evaluated by comparing several widely used machine-learning algorithms. Recordings of advertisement calls from 142 species belonging to four genera were analyzed. A logistic regression model, using mean values for dominant frequency, coefficient of variation of root-mean square energy, and spectral flux, correctly classified advertisement calls with regard to genus with an accuracy above 70%. Similar accuracy rates were obtained using these parameters with a support vector machine model, a K-nearest neighbor algorithm, and a multivariate Gaussian distribution classifier, whereas a Gaussian mixture model performed slightly worse. In contrast, models based on mel-frequency cepstral coefficients did not fare as well. Comparable accuracy levels were obtained on out-of-sample recordings from 52 of the 142 original species. The results suggest that a combination of low-level acoustic attributes is sufficient to discriminate efficiently between the vocalizations of these four genera, thus supporting the initial premise and validating the use of high-throughput algorithms on animal vocalizations to evaluate phylogenetic hypotheses.

Mesh:

Year:  2013        PMID: 23297926     DOI: 10.1121/1.4768878

Source DB:  PubMed          Journal:  J Acoust Soc Am        ISSN: 0001-4966            Impact factor:   1.840


  6 in total

1.  Acoustic characteristics of eight common Chinese anurans during the breeding season.

Authors:  Yi-Lin Zhou; Xia Qiu; Xiao-Bin Fang; Lu-Yi Yang; Yi Zhao; Teng Fang; Wei-Hong Zheng; Jin-Song Liu
Journal:  Dongwuxue Yanjiu       Date:  2014-01

2.  Designing better frog call recognition models.

Authors:  Paul S Crump; Jeff Houlahan
Journal:  Ecol Evol       Date:  2017-03-30       Impact factor: 2.912

3.  Ontogeny of vocal rhythms in harbor seal pups: an exploratory study.

Authors:  Andrea Ravignani; Christopher T Kello; Koen de Reus; Sonja A Kotz; Simone Dalla Bella; Margarita Méndez-Aróstegui; Beatriz Rapado-Tamarit; Ana Rubio-Garcia; Bart de Boer
Journal:  Curr Zool       Date:  2018-07-07       Impact factor: 2.624

4.  Rhythm and synchrony in animal movement and communication.

Authors:  Andrea Ravignani
Journal:  Curr Zool       Date:  2018-11-23       Impact factor: 2.624

5.  Phylogenetic signal in the acoustic parameters of the advertisement calls of four clades of anurans.

Authors:  Bruno Gingras; Elmira Mohandesan; Drasko Boko; W Tecumseh Fitch
Journal:  BMC Evol Biol       Date:  2013-07-01       Impact factor: 3.260

6.  Structural Classification of Wild Boar (Sus scrofa) Vocalizations.

Authors:  Maxime Garcia; Bruno Gingras; Daniel L Bowling; Christian T Herbst; Markus Boeckle; Yann Locatelli; W Tecumseh Fitch
Journal:  Ethology       Date:  2016-02-16       Impact factor: 1.897

  6 in total

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