Literature DB >> 23297219

Function of Piwi, a nuclear Piwi/Argonaute protein, is independent of its slicer activity.

Nicole Darricarrère1, Na Liu, Toshiaki Watanabe, Haifan Lin.   

Abstract

The Piwi protein subfamily is essential for Piwi-interacting RNA (piRNA) biogenesis, transposon silencing, and germ-line development, all of which have been proposed to require Piwi endonuclease activity, as validated for two cytoplasmic Piwi proteins in mice. However, recent evidence has led to questioning of the generality of this mechanism for the Piwi members that reside in the nucleus. Drosophila offers a distinct opportunity to study the function of nuclear Piwi proteins because, among three Drosophila Piwi proteins--called Piwi, Aubergine, and Argonaute 3--Piwi is the only member of this subfamily that is localized in the nucleus and expressed in both germ-line and somatic cells in the gonad, where it is responsible for piRNA biogenesis and regulatory functions essential for fertility. In this study, we demonstrate beyond doubt that the slicer activity of Piwi is not required for any known functions in vivo. We show that, in transgenic flies with the DDX catalytic triad of PIWI mutated, neither primary nor secondary piRNA biogenesis is detectably affected, transposons remain repressed, and fertility is normal. Our observations demonstrate that the mechanism of Piwi is independent of its in vitro endonuclease activity. Instead, it is consistent with the alternative mode of Piwi function as a molecule involved in the piRNA-directed guidance of epigenetic factors to chromatin.

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Year:  2013        PMID: 23297219      PMCID: PMC3557079          DOI: 10.1073/pnas.1213283110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  30 in total

1.  A novel class of small RNAs bind to MILI protein in mouse testes.

Authors:  Alexei Aravin; Dimos Gaidatzis; Sébastien Pfeffer; Mariana Lagos-Quintana; Pablo Landgraf; Nicola Iovino; Patricia Morris; Michael J Brownstein; Satomi Kuramochi-Miyagawa; Toru Nakano; Minchen Chien; James J Russo; Jingyue Ju; Robert Sheridan; Chris Sander; Mihaela Zavolan; Thomas Tuschl
Journal:  Nature       Date:  2006-06-04       Impact factor: 49.962

2.  A germline-specific class of small RNAs binds mammalian Piwi proteins.

Authors:  Angélique Girard; Ravi Sachidanandam; Gregory J Hannon; Michelle A Carmell
Journal:  Nature       Date:  2006-06-04       Impact factor: 49.962

3.  A novel class of small RNAs in mouse spermatogenic cells.

Authors:  Shane T Grivna; Ergin Beyret; Zhong Wang; Haifan Lin
Journal:  Genes Dev       Date:  2006-06-09       Impact factor: 11.361

4.  Identification and characterization of two novel classes of small RNAs in the mouse germline: retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes.

Authors:  Toshiaki Watanabe; Atsushi Takeda; Tomoyuki Tsukiyama; Kazuyuki Mise; Tetsuro Okuno; Hiroyuki Sasaki; Naojiro Minami; Hiroshi Imai
Journal:  Genes Dev       Date:  2006-06-09       Impact factor: 11.361

5.  Characterization of the piRNA complex from rat testes.

Authors:  Nelson C Lau; Anita G Seto; Jinkuk Kim; Satomi Kuramochi-Miyagawa; Toru Nakano; David P Bartel; Robert E Kingston
Journal:  Science       Date:  2006-06-15       Impact factor: 47.728

6.  Crystal structure of a PIWI protein suggests mechanisms for siRNA recognition and slicer activity.

Authors:  James S Parker; S Mark Roe; David Barford
Journal:  EMBO J       Date:  2004-11-25       Impact factor: 11.598

7.  The endonuclease activity of Mili fuels piRNA amplification that silences LINE1 elements.

Authors:  Serena De Fazio; Nenad Bartonicek; Monica Di Giacomo; Cei Abreu-Goodger; Aditya Sankar; Charlotta Funaya; Claude Antony; Pedro N Moreira; Anton J Enright; Dónal O'Carroll
Journal:  Nature       Date:  2011-10-23       Impact factor: 49.962

8.  A novel class of evolutionarily conserved genes defined by piwi are essential for stem cell self-renewal.

Authors:  D N Cox; A Chao; J Baker; L Chang; D Qiao; H Lin
Journal:  Genes Dev       Date:  1998-12-01       Impact factor: 11.361

9.  piwi encodes a nucleoplasmic factor whose activity modulates the number and division rate of germline stem cells.

Authors:  D N Cox; A Chao; H Lin
Journal:  Development       Date:  2000-02       Impact factor: 6.868

10.  A novel group of pumilio mutations affects the asymmetric division of germline stem cells in the Drosophila ovary.

Authors:  H Lin; A C Spradling
Journal:  Development       Date:  1997-06       Impact factor: 6.868

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  32 in total

Review 1.  PIWI-interacting RNAs: from generation to transgenerational epigenetics.

Authors:  Maartje J Luteijn; René F Ketting
Journal:  Nat Rev Genet       Date:  2013-06-25       Impact factor: 53.242

2.  Maternally deposited germline piRNAs silence the tirant retrotransposon in somatic cells.

Authors:  Abdou Akkouche; Thomas Grentzinger; Marie Fablet; Claudia Armenise; Nelly Burlet; Virginie Braman; Séverine Chambeyron; Cristina Vieira
Journal:  EMBO Rep       Date:  2013-04-05       Impact factor: 8.807

3.  tRNA processing defects induce replication stress and Chk2-dependent disruption of piRNA transcription.

Authors:  Anahi Molla-Herman; Ana Maria Vallés; Carine Ganem-Elbaz; Christophe Antoniewski; Jean-René Huynh
Journal:  EMBO J       Date:  2015-10-15       Impact factor: 11.598

4.  The piRNA targeting rules and the resistance to piRNA silencing in endogenous genes.

Authors:  Donglei Zhang; Shikui Tu; Michael Stubna; Wei-Sheng Wu; Wei-Che Huang; Zhiping Weng; Heng-Chi Lee
Journal:  Science       Date:  2018-02-01       Impact factor: 47.728

Review 5.  Protecting and Diversifying the Germline.

Authors:  Ryan J Gleason; Amit Anand; Toshie Kai; Xin Chen
Journal:  Genetics       Date:  2018-02       Impact factor: 4.562

6.  Zfrp8/PDCD2 is required in ovarian stem cells and interacts with the piRNA pathway machinery.

Authors:  Svetlana Minakhina; Neha Changela; Ruth Steward
Journal:  Development       Date:  2014-01       Impact factor: 6.868

7.  Heterochromatin-Associated Proteins HP1a and Piwi Collaborate to Maintain the Association of Achiasmate Homologs in Drosophila Oocytes.

Authors:  Christopher C Giauque; Sharon E Bickel
Journal:  Genetics       Date:  2016-03-16       Impact factor: 4.562

Review 8.  Untangling the web: the diverse functions of the PIWI/piRNA pathway.

Authors:  Sneha Ramesh Mani; Celina E Juliano
Journal:  Mol Reprod Dev       Date:  2013-06-27       Impact factor: 2.609

9.  A nuclear perspective on RNAi pathways in metazoans.

Authors:  Germano Cecere; Alla Grishok
Journal:  Biochim Biophys Acta       Date:  2013-12-17

Review 10.  PIWI proteins and PIWI-interacting RNAs in the soma.

Authors:  Robert J Ross; Molly M Weiner; Haifan Lin
Journal:  Nature       Date:  2014-01-16       Impact factor: 49.962

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