Literature DB >> 23288934

The border between the ultrabithorax and abdominal-A regulatory domains in the Drosophila bithorax complex.

Welcome Bender1, Maura Lucas.   

Abstract

The bithorax complex in Drosophila melanogaster includes three homeobox-containing genes--Ultrabithorax (Ubx), abdominal--A (abd-A), and Abdominal-B (Abd-B)-which are required for the proper differentiation of the posterior 10 segments of the body. Each of these genes has multiple distinct regulatory regions; there is one for each segmental unit of the body plan where the genes are expressed. One additional protein- coding gene in the bithorax complex, Glut3, a sugar-transporter homolog, can be deleted without phenotype. We focus here on the upstream regulatory region for Ubx, the bithoraxoid (bxd) domain, and its border with the adjacent infraabdominal-2 (iab-2) domain, which controls abdA. These two domains can be defined by the phenotypes of rearrangement breakpoints, and by the expression patterns of enhancer traps. In D. virilis, the homeotic cluster is split between Ubx and abd-A, and so the border can also be located by a sequence comparison between species. When the border region is deleted in melanogaster, the flies show a dominant phenotype called Front-ultraabdominal (Fub); the first abdominal segment is transformed into a copy of the second abdominal segment. Thus, the border blocks the spread of activation from the bxd domain into the iab-2 domain.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23288934      PMCID: PMC3606092          DOI: 10.1534/genetics.112.146340

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  66 in total

1.  Altering the insertional specificity of a Drosophila transposable element.

Authors:  J A Kassis; E Noll; E P VanSickle; W F Odenwald; N Perrimon
Journal:  Proc Natl Acad Sci U S A       Date:  1992-03-01       Impact factor: 11.205

2.  Replacement of Fab-7 by the gypsy or scs insulator disrupts long-distance regulatory interactions in the Abd-B gene of the bithorax complex.

Authors:  I Hogga; J Mihaly; S Barges; F Karch
Journal:  Mol Cell       Date:  2001-11       Impact factor: 17.970

3.  Dynamics and memory of heterochromatin in living cells.

Authors:  Nathaniel A Hathaway; Oliver Bell; Courtney Hodges; Erik L Miller; Dana S Neel; Gerald R Crabtree
Journal:  Cell       Date:  2012-06-14       Impact factor: 41.582

4.  Distinct parasegmental and imaginal enhancers and the establishment of the expression pattern of the Ubx gene.

Authors:  V Pirrotta; C S Chan; D McCabe; S Qian
Journal:  Genetics       Date:  1995-12       Impact factor: 4.562

5.  Enhancer traps in the Drosophila bithorax complex mark parasegmental domains.

Authors:  K McCall; M B O'Connor; W Bender
Journal:  Genetics       Date:  1994-10       Impact factor: 4.562

6.  Polycomb preferentially targets stalled promoters of coding and noncoding transcripts.

Authors:  Daniel Enderle; Christian Beisel; Michael B Stadler; Moritz Gerstung; Prashanth Athri; Renato Paro
Journal:  Genome Res       Date:  2010-12-22       Impact factor: 9.043

7.  Protected P-element termini suggest a role for inverted-repeat-binding protein in transposase-induced gap repair in Drosophila melanogaster.

Authors:  B E Staveley; T R Heslip; R B Hodgetts; J B Bell
Journal:  Genetics       Date:  1995-03       Impact factor: 4.562

8.  abdA expression in Drosophila embryos.

Authors:  F Karch; W Bender; B Weiffenbach
Journal:  Genes Dev       Date:  1990-09       Impact factor: 11.361

9.  The bluetail transposon: evidence for independent cis-regulatory domains and domain boundaries in the bithorax complex.

Authors:  M Galloni; H Gyurkovics; P Schedl; F Karch
Journal:  EMBO J       Date:  1993-03       Impact factor: 11.598

10.  A comprehensive map of insulator elements for the Drosophila genome.

Authors:  Nicolas Nègre; Christopher D Brown; Parantu K Shah; Pouya Kheradpour; Carolyn A Morrison; Jorja G Henikoff; Xin Feng; Kami Ahmad; Steven Russell; Robert A H White; Lincoln Stein; Steven Henikoff; Manolis Kellis; Kevin P White
Journal:  PLoS Genet       Date:  2010-01-15       Impact factor: 5.917

View more
  21 in total

1.  A variably occupied CTCF binding site in the ultrabithorax gene in the Drosophila bithorax complex.

Authors:  Jose Paolo Magbanua; Estelle Runneburger; Steven Russell; Robert White
Journal:  Mol Cell Biol       Date:  2014-11-03       Impact factor: 4.272

2.  Functional Requirements for Fab-7 Boundary Activity in the Bithorax Complex.

Authors:  Daniel Wolle; Fabienne Cleard; Tsutomu Aoki; Girish Deshpande; Paul Schedl; Francois Karch
Journal:  Mol Cell Biol       Date:  2015-08-24       Impact factor: 4.272

3.  Architectural protein Pita cooperates with dCTCF in organization of functional boundaries in Bithorax complex.

Authors:  Olga Kyrchanova; Nikolay Zolotarev; Vladic Mogila; Oksana Maksimenko; Paul Schedl; Pavel Georgiev
Journal:  Development       Date:  2017-06-15       Impact factor: 6.868

4.  Complete reconstitution of bypass and blocking functions in a minimal artificial Fab-7 insulator from Drosophila bithorax complex.

Authors:  Olga Kyrchanova; Marat Sabirov; Vladic Mogila; Amina Kurbidaeva; Nikolay Postika; Oksana Maksimenko; Paul Schedl; Pavel Georgiev
Journal:  Proc Natl Acad Sci U S A       Date:  2019-06-17       Impact factor: 11.205

5.  Distinct Roles of Chromatin Insulator Proteins in Control of the Drosophila Bithorax Complex.

Authors:  Mikhail Savitsky; Maria Kim; Oksana Kravchuk; Yuri B Schwartz
Journal:  Genetics       Date:  2015-12-29       Impact factor: 4.562

6.  Noncoding RNAs of the Ultrabithorax domain of the Drosophila bithorax complex.

Authors:  Benjamin Pease; Ana C Borges; Welcome Bender
Journal:  Genetics       Date:  2013-09-27       Impact factor: 4.562

7.  Redundant enhancers in the iab-5 domain cooperatively activate Abd-B in the A5 and A6 abdominal segments of Drosophila.

Authors:  Nikolay Postika; Paul Schedl; Pavel Georgiev; Olga Kyrchanova
Journal:  Development       Date:  2021-09-24       Impact factor: 6.862

8.  The boundary paradox in the Bithorax complex.

Authors:  Olga Kyrchanova; Vladic Mogila; Daniel Wolle; Jose Paolo Magbanua; Robert White; Pavel Georgiev; Paul Schedl
Journal:  Mech Dev       Date:  2015-07-26       Impact factor: 1.882

Review 9.  Making connections: insulators organize eukaryotic chromosomes into independent cis-regulatory networks.

Authors:  Darya Chetverina; Tsutomu Aoki; Maksim Erokhin; Pavel Georgiev; Paul Schedl
Journal:  Bioessays       Date:  2013-11-26       Impact factor: 4.345

Review 10.  The open for business model of the bithorax complex in Drosophila.

Authors:  Robert K Maeda; François Karch
Journal:  Chromosoma       Date:  2015-06-12       Impact factor: 4.316

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.