Literature DB >> 23286051

Constrained sparse functional connectivity networks for MCI classification.

Chong-Yaw Wee1, Pew-Thian Yap, Daoqiang Zhang, Lihong Wang, Dinggang Shen.   

Abstract

Mild cognitive impairment (MCI) is difficult to diagnose due to its subtlety. Recent emergence of advanced network analysis techniques utilizing resting-state functional Magnetic Resonance Imaging (rs-fMRI) has made the understanding of neurological disorders more comprehensively at a whole-brain connectivity level. However, inferring effective brain connectivity from fMRI data is a challenging task, particularly when the ultimate goal is to obtain good control-patient classification performance. Incorporating sparsity into connectivity modeling can potentially produce results that are biologically more meaningful since most biologically networks are formed by a relatively few number of connections. However, this constraint, when applied at an individual level, will degrade classification performance due to inter-subject variability. To address this problem, we consider a constrained sparse linear regression model associated with the least absolute shrinkage and selection operator (LASSO). Specifically, we introduced sparsity into brain connectivity via l1-norm penalization, and ensured consistent non-zero connections across subjects via l2-norm penalization. Our results demonstrate that the constrained sparse network gives better classification performance than the conventional correlation-based network, indicating its greater sensitivity to early stage brain pathologies.

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Year:  2012        PMID: 23286051      PMCID: PMC3652429          DOI: 10.1007/978-3-642-33418-4_27

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  17 in total

1.  Atrophy of the medial occipitotemporal, inferior, and middle temporal gyri in non-demented elderly predict decline to Alzheimer's disease.

Authors:  A Convit; J de Asis; M J de Leon; C Y Tarshish; S De Santi; H Rusinek
Journal:  Neurobiol Aging       Date:  2000 Jan-Feb       Impact factor: 4.673

2.  Differential cortical atrophy in subgroups of mild cognitive impairment.

Authors:  Sandra Bell-McGinty; Oscar L Lopez; Carolyn Cidis Meltzer; Joelle M Scanlon; Ellen M Whyte; Steven T Dekosky; James T Becker
Journal:  Arch Neurol       Date:  2005-09

3.  Intrinsic functional connectivity as a tool for human connectomics: theory, properties, and optimization.

Authors:  Koene R A Van Dijk; Trey Hedden; Archana Venkataraman; Karleyton C Evans; Sara W Lazar; Randy L Buckner
Journal:  J Neurophysiol       Date:  2009-11-04       Impact factor: 2.714

4.  Brain structural alterations before mild cognitive impairment.

Authors:  C D Smith; H Chebrolu; D R Wekstein; F A Schmitt; G A Jicha; G Cooper; W R Markesbery
Journal:  Neurology       Date:  2007-04-17       Impact factor: 9.910

5.  Unawareness of memory deficit in amnestic MCI: FDG-PET findings.

Authors:  Flavio Nobili; Debora Mazzei; Barbara Dessi; Silvia Morbelli; Andrea Brugnolo; Paola Barbieri; Nicola Girtler; Gianmario Sambuceti; Guido Rodriguez; Marco Pagani
Journal:  J Alzheimers Dis       Date:  2010       Impact factor: 4.472

6.  Altered functional connectivity in early Alzheimer's disease: a resting-state fMRI study.

Authors:  Kun Wang; Meng Liang; Liang Wang; Lixia Tian; Xinqing Zhang; Kuncheng Li; Tianzi Jiang
Journal:  Hum Brain Mapp       Date:  2007-10       Impact factor: 5.038

7.  Evidence from functional neuroimaging of a compensatory prefrontal network in Alzheimer's disease.

Authors:  Cheryl L Grady; Anthony R McIntosh; Sania Beig; Michelle L Keightley; Hana Burian; Sandra E Black
Journal:  J Neurosci       Date:  2003-02-01       Impact factor: 6.167

8.  Resting-state BOLD networks versus task-associated functional MRI for distinguishing Alzheimer's disease risk groups.

Authors:  Adam S Fleisher; Ayesha Sherzai; Curtis Taylor; Jessica B S Langbaum; Kewei Chen; Richard B Buxton
Journal:  Neuroimage       Date:  2009-06-16       Impact factor: 6.556

9.  Resting-state multi-spectrum functional connectivity networks for identification of MCI patients.

Authors:  Chong-Yaw Wee; Pew-Thian Yap; Kevin Denny; Jeffrey N Browndyke; Guy G Potter; Kathleen A Welsh-Bohmer; Lihong Wang; Dinggang Shen
Journal:  PLoS One       Date:  2012-05-30       Impact factor: 3.240

10.  Network analysis of intrinsic functional brain connectivity in Alzheimer's disease.

Authors:  Kaustubh Supekar; Vinod Menon; Daniel Rubin; Mark Musen; Michael D Greicius
Journal:  PLoS Comput Biol       Date:  2008-06-27       Impact factor: 4.475

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  17 in total

1.  Supervised machine learning for diagnostic classification from large-scale neuroimaging datasets.

Authors:  Pradyumna Lanka; D Rangaprakash; Michael N Dretsch; Jeffrey S Katz; Thomas S Denney; Gopikrishna Deshpande
Journal:  Brain Imaging Behav       Date:  2020-12       Impact factor: 3.978

2.  Fusion of High-Order and Low-Order Effective Connectivity Networks for MCI Classification.

Authors:  Yang Li; Jingyu Liu; Ke Li; Pew-Thian Yap; Minjeong Kim; Chong-Yaw Wee; Dinggang Shen
Journal:  Mach Learn Med Imaging       Date:  2017-09-07

3.  Deep ensemble learning of sparse regression models for brain disease diagnosis.

Authors:  Heung-Il Suk; Seong-Whan Lee; Dinggang Shen
Journal:  Med Image Anal       Date:  2017-01-24       Impact factor: 8.545

4.  Supervised Discriminative Group Sparse Representation for Mild Cognitive Impairment Diagnosis.

Authors:  Heung-Il Suk; Chong-Yaw Wee; Seong-Whan Lee; Dinggang Shen
Journal:  Neuroinformatics       Date:  2015-07

5.  Contour tracking in echocardiographic sequences via sparse representation and dictionary learning.

Authors:  Xiaojie Huang; Donald P Dione; Colin B Compas; Xenophon Papademetris; Ben A Lin; Alda Bregasi; Albert J Sinusas; Lawrence H Staib; James S Duncan
Journal:  Med Image Anal       Date:  2013-11-06       Impact factor: 8.545

6.  Integration of network topological and connectivity properties for neuroimaging classification.

Authors:  Biao Jie; Daoqiang Zhang; Wei Gao; Qian Wang; Chong-Yaw Wee; Dinggang Shen
Journal:  IEEE Trans Biomed Eng       Date:  2014-02       Impact factor: 4.538

7.  High-order resting-state functional connectivity network for MCI classification.

Authors:  Xiaobo Chen; Han Zhang; Yue Gao; Chong-Yaw Wee; Gang Li; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2016-05-04       Impact factor: 5.038

Review 8.  Sparse Data-Driven Learning for Effective and Efficient Biomedical Image Segmentation.

Authors:  John A Onofrey; Lawrence H Staib; Xiaojie Huang; Fan Zhang; Xenophon Papademetris; Dimitris Metaxas; Daniel Rueckert; James S Duncan
Journal:  Annu Rev Biomed Eng       Date:  2020-03-13       Impact factor: 11.324

9.  Sparse network-based models for patient classification using fMRI.

Authors:  Maria J Rosa; Liana Portugal; Tim Hahn; Andreas J Fallgatter; Marta I Garrido; John Shawe-Taylor; Janaina Mourao-Miranda
Journal:  Neuroimage       Date:  2014-11-15       Impact factor: 6.556

10.  Identifying resting-state effective connectivity abnormalities in drug-naïve major depressive disorder diagnosis via graph convolutional networks.

Authors:  Eunji Jun; Kyoung-Sae Na; Wooyoung Kang; Jiyeon Lee; Heung-Il Suk; Byung-Joo Ham
Journal:  Hum Brain Mapp       Date:  2020-08-19       Impact factor: 5.038

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