Literature DB >> 23284479

(E)-3-(1,3-Benzodioxol-5-yl)-2-{[N-(2-formylphenyl)-4-methylbenzenesulfon-amido]methyl}prop-2-enenitrile.

M Bakthadoss1, A Devaraj, R Madhanraj, S Murugavel.   

Abstract

In the title compound, C(25)H(20)N(2)O(5)S, the benzodioxole ring system is essentially planar [maximum deviation = 0.021 (2) Å] and forms dihedral angles of 85.2 (1) and 74.2 (1)°, respectively, with the formyl benzene and sulfonyl-bound benzene rings. In the crystal, C-H⋯O hydrogen bonds generate C(8) chains along [100] and R(3) (3)(19) ring motifs. In addition, a weak π-π inter-action [centroid-centroid distance = 3.937 (3) Å] is also observed.

Entities:  

Year:  2012        PMID: 23284479      PMCID: PMC3515259          DOI: 10.1107/S1600536812042663

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the pharmacological uses of sulfonamides, see: Korolkovas (1988 ▶); Mandell & Sande (1992 ▶). For benzodioxole derivatives, see: Ullrich et al. (2004 ▶); Gates & Gillon (1974 ▶); Arndt & Franke (1977 ▶); Joshi et al. (2005 ▶); Jae et al. (2001 ▶); Leite et al. (2004 ▶). For related structures, see: Madhanraj et al. (2011 ▶); Aziz-ur-Rehman et al. (2010 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For the Thrope–Ingold effect, see: Bassindale (1984 ▶).

Experimental

Crystal data

C25H20N2O5S M = 460.49 Monoclinic, a = 8.921 (5) Å b = 10.235 (4) Å c = 25.256 (3) Å β = 93.380 (4)° V = 2302.0 (16) Å3 Z = 4 Mo Kα radiation μ = 0.18 mm−1 T = 293 K 0.23 × 0.21 × 0.16 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.959, T max = 0.972 26810 measured reflections 6451 independent reflections 3582 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.050 wR(F 2) = 0.148 S = 1.01 6451 reflections 299 parameters H-atom parameters constrained Δρmax = 0.24 e Å−3 Δρmin = −0.28 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2 and SAINT (Bruker, 2004 ▶); data reduction: SAINT and XPREP (Bruker, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia (1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812042663/bt6843sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812042663/bt6843Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812042663/bt6843Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C25H20N2O5SF(000) = 960
Mr = 460.49Dx = 1.329 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 6508 reflections
a = 8.921 (5) Åθ = 2.2–29.6°
b = 10.235 (4) ŵ = 0.18 mm1
c = 25.256 (3) ÅT = 293 K
β = 93.380 (4)°Block, colourless
V = 2302.0 (16) Å30.23 × 0.21 × 0.16 mm
Z = 4
Bruker APEXII CCD diffractometer6451 independent reflections
Radiation source: fine-focus sealed tube3582 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.035
Detector resolution: 10.0 pixels mm-1θmax = 29.6°, θmin = 2.2°
ω scansh = −11→12
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)k = −12→14
Tmin = 0.959, Tmax = 0.972l = −35→35
26810 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.050Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.148H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.061P)2 + 0.4367P] where P = (Fo2 + 2Fc2)/3
6451 reflections(Δ/σ)max = 0.001
299 parametersΔρmax = 0.24 e Å3
0 restraintsΔρmin = −0.28 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.88821 (17)0.29000 (16)0.70678 (7)0.0460 (4)
C20.7817 (2)0.21821 (19)0.73197 (8)0.0583 (5)
H20.81110.14800.75350.070*
C30.6312 (2)0.2512 (2)0.72499 (9)0.0708 (6)
H30.55970.20200.74150.085*
C40.5870 (2)0.3551 (2)0.69422 (9)0.0720 (6)
H40.48600.37760.69030.086*
C50.6909 (2)0.4257 (2)0.66930 (9)0.0690 (5)
H50.66000.49640.64820.083*
C60.8425 (2)0.39395 (18)0.67483 (8)0.0571 (5)
C70.9488 (3)0.4706 (3)0.64478 (12)0.0993 (9)
H71.04640.43970.64290.119*
C81.0796 (2)0.2967 (2)0.82269 (8)0.0615 (5)
C91.1506 (3)0.1941 (2)0.84920 (10)0.0804 (6)
H91.23290.15350.83530.096*
C101.0975 (4)0.1524 (3)0.89685 (12)0.1011 (9)
H101.14490.08310.91480.121*
C110.9766 (4)0.2113 (4)0.91805 (12)0.1072 (10)
C120.9091 (3)0.3127 (4)0.89092 (13)0.1068 (9)
H120.82700.35340.90490.128*
C130.9580 (3)0.3563 (2)0.84401 (10)0.0836 (7)
H130.90980.42570.82640.100*
C140.9192 (5)0.1625 (5)0.96973 (14)0.1774 (19)
H14A0.87190.23300.98740.266*
H14B1.00170.12970.99200.266*
H14C0.84760.09380.96250.266*
C151.0965 (2)0.12671 (18)0.70817 (8)0.0607 (5)
H15A1.02100.06720.72020.073*
H15B1.18830.11230.72990.073*
C161.12431 (19)0.09650 (18)0.65121 (7)0.0547 (4)
C171.0763 (2)−0.01502 (18)0.62804 (8)0.0570 (5)
H171.0133−0.06410.64830.068*
C181.1044 (2)−0.07351 (18)0.57716 (7)0.0570 (5)
C191.2126 (3)−0.0279 (2)0.54337 (8)0.0743 (6)
H191.26940.04640.55160.089*
C201.2309 (3)−0.0963 (2)0.49839 (9)0.0778 (6)
C211.1496 (3)−0.2059 (2)0.48521 (9)0.0798 (6)
C221.0463 (3)−0.2538 (2)0.51699 (10)0.0911 (8)
H220.9916−0.32880.50820.109*
C231.0258 (3)−0.1855 (2)0.56332 (9)0.0741 (6)
H230.9558−0.21650.58610.089*
C241.2139 (2)0.1901 (2)0.62545 (9)0.0708 (6)
C251.3046 (4)−0.1707 (3)0.42145 (11)0.1120 (10)
H25A1.2715−0.13140.38780.134*
H25B1.3966−0.21860.41650.134*
N11.04579 (15)0.26209 (13)0.71551 (6)0.0523 (4)
N21.2828 (3)0.2688 (2)0.60623 (9)0.1089 (8)
O10.9152 (3)0.5697 (3)0.62298 (14)0.1952 (15)
O21.08789 (15)0.48120 (13)0.75324 (7)0.0788 (4)
O31.29242 (13)0.31885 (16)0.75875 (7)0.0844 (5)
O41.1940 (3)−0.2561 (2)0.43819 (7)0.1168 (7)
O51.3313 (3)−0.0722 (2)0.46024 (7)0.1254 (8)
S11.13777 (5)0.34993 (5)0.76162 (2)0.06199 (17)
U11U22U33U12U13U23
C10.0383 (8)0.0409 (8)0.0596 (10)−0.0011 (7)0.0085 (7)−0.0013 (8)
C20.0554 (11)0.0548 (11)0.0657 (12)−0.0087 (9)0.0117 (9)0.0054 (9)
C30.0455 (10)0.0779 (14)0.0907 (15)−0.0188 (10)0.0180 (10)−0.0106 (12)
C40.0411 (10)0.0852 (16)0.0894 (15)0.0038 (10)0.0008 (10)−0.0146 (13)
C50.0615 (12)0.0646 (13)0.0802 (14)0.0145 (10)−0.0026 (10)0.0018 (11)
C60.0482 (10)0.0492 (10)0.0748 (12)0.0024 (8)0.0105 (9)0.0069 (9)
C70.0858 (17)0.0776 (16)0.137 (2)0.0021 (13)0.0276 (16)0.0496 (16)
C80.0434 (9)0.0609 (11)0.0794 (13)−0.0038 (9)−0.0038 (9)−0.0227 (10)
C90.0644 (13)0.0822 (16)0.0931 (17)0.0013 (12)−0.0080 (12)−0.0174 (14)
C100.107 (2)0.105 (2)0.0874 (19)−0.0205 (18)−0.0199 (17)0.0057 (16)
C110.106 (2)0.136 (3)0.0801 (18)−0.037 (2)0.0101 (17)−0.0326 (19)
C120.094 (2)0.124 (2)0.105 (2)−0.0081 (19)0.0311 (17)−0.039 (2)
C130.0698 (14)0.0851 (16)0.0974 (18)0.0046 (12)0.0176 (13)−0.0266 (14)
C140.203 (4)0.244 (5)0.088 (2)−0.061 (4)0.033 (2)−0.002 (3)
C150.0602 (11)0.0530 (10)0.0693 (12)0.0162 (9)0.0083 (9)−0.0018 (9)
C160.0461 (9)0.0556 (11)0.0625 (11)0.0076 (8)0.0058 (8)0.0000 (9)
C170.0544 (10)0.0524 (10)0.0643 (11)0.0041 (9)0.0046 (9)0.0066 (9)
C180.0611 (11)0.0500 (10)0.0593 (11)0.0019 (9)−0.0010 (9)0.0032 (8)
C190.0934 (16)0.0631 (12)0.0672 (13)−0.0196 (12)0.0133 (11)−0.0060 (10)
C200.1023 (17)0.0726 (14)0.0598 (13)−0.0106 (13)0.0150 (12)−0.0013 (11)
C210.1077 (18)0.0704 (14)0.0607 (13)−0.0056 (14)0.0010 (12)−0.0096 (11)
C220.110 (2)0.0724 (15)0.0909 (18)−0.0265 (14)0.0079 (15)−0.0197 (13)
C230.0794 (14)0.0626 (13)0.0809 (15)−0.0122 (11)0.0103 (11)−0.0005 (11)
C240.0687 (13)0.0712 (13)0.0741 (14)−0.0141 (11)0.0173 (11)−0.0181 (11)
C250.156 (3)0.115 (2)0.0679 (16)−0.012 (2)0.0270 (17)−0.0224 (16)
N10.0398 (7)0.0451 (8)0.0725 (10)0.0052 (6)0.0084 (7)−0.0033 (7)
N20.1215 (18)0.1053 (17)0.1043 (16)−0.0526 (15)0.0437 (14)−0.0253 (13)
O10.144 (2)0.142 (2)0.305 (4)0.0164 (17)0.054 (2)0.157 (3)
O20.0565 (8)0.0483 (8)0.1309 (13)−0.0080 (6)0.0003 (8)−0.0096 (8)
O30.0349 (7)0.0990 (12)0.1201 (13)−0.0006 (7)0.0105 (7)−0.0133 (10)
O40.170 (2)0.1052 (14)0.0777 (12)−0.0327 (14)0.0295 (12)−0.0314 (10)
O50.183 (2)0.1159 (15)0.0837 (12)−0.0514 (15)0.0614 (13)−0.0252 (11)
S10.0339 (2)0.0565 (3)0.0959 (4)−0.0033 (2)0.0072 (2)−0.0108 (3)
C1—C61.382 (2)C14—H14C0.9600
C1—C21.385 (2)C15—N11.473 (2)
C1—N11.439 (2)C15—C161.506 (3)
C2—C31.386 (3)C15—H15A0.9700
C2—H20.9300C15—H15B0.9700
C3—C41.361 (3)C16—C171.341 (3)
C3—H30.9300C16—C241.429 (3)
C4—C51.359 (3)C17—C181.453 (3)
C4—H40.9300C17—H170.9300
C5—C61.390 (3)C18—C231.378 (3)
C5—H50.9300C18—C191.406 (3)
C6—C71.475 (3)C19—C201.352 (3)
C7—O11.184 (3)C19—H190.9300
C7—H70.9300C20—C211.367 (3)
C8—C91.379 (3)C20—O51.376 (3)
C8—C131.381 (3)C21—C221.349 (3)
C8—S11.743 (2)C21—O41.373 (3)
C9—C101.386 (4)C22—C231.384 (3)
C9—H90.9300C22—H220.9300
C10—C111.372 (4)C23—H230.9300
C10—H100.9300C24—N21.138 (3)
C11—C121.364 (4)C25—O41.402 (3)
C11—C141.515 (5)C25—O51.417 (3)
C12—C131.361 (4)C25—H25A0.9700
C12—H120.9300C25—H25B0.9700
C13—H130.9300N1—S11.6508 (16)
C14—H14A0.9600O2—S11.4272 (15)
C14—H14B0.9600O3—S11.4219 (15)
C6—C1—C2119.32 (16)C16—C15—H15A109.1
C6—C1—N1119.61 (14)N1—C15—H15B109.1
C2—C1—N1120.99 (16)C16—C15—H15B109.1
C1—C2—C3119.88 (19)H15A—C15—H15B107.8
C1—C2—H2120.1C17—C16—C24123.01 (18)
C3—C2—H2120.1C17—C16—C15121.67 (17)
C4—C3—C2120.55 (18)C24—C16—C15115.16 (17)
C4—C3—H3119.7C16—C17—C18132.02 (18)
C2—C3—H3119.7C16—C17—H17114.0
C5—C4—C3119.87 (19)C18—C17—H17114.0
C5—C4—H4120.1C23—C18—C19118.69 (19)
C3—C4—H4120.1C23—C18—C17117.08 (18)
C4—C5—C6121.0 (2)C19—C18—C17124.10 (18)
C4—C5—H5119.5C20—C19—C18117.3 (2)
C6—C5—H5119.5C20—C19—H19121.3
C1—C6—C5119.36 (17)C18—C19—H19121.3
C1—C6—C7122.22 (18)C19—C20—C21122.8 (2)
C5—C6—C7118.39 (19)C19—C20—O5127.7 (2)
O1—C7—C6122.8 (3)C21—C20—O5109.6 (2)
O1—C7—H7118.6C22—C21—C20121.6 (2)
C6—C7—H7118.6C22—C21—O4128.4 (2)
C9—C8—C13119.7 (2)C20—C21—O4110.0 (2)
C9—C8—S1121.03 (17)C21—C22—C23116.7 (2)
C13—C8—S1119.24 (19)C21—C22—H22121.7
C8—C9—C10119.1 (2)C23—C22—H22121.7
C8—C9—H9120.5C18—C23—C22122.9 (2)
C10—C9—H9120.5C18—C23—H23118.5
C11—C10—C9121.3 (3)C22—C23—H23118.5
C11—C10—H10119.3N2—C24—C16177.1 (2)
C9—C10—H10119.3O4—C25—O5109.1 (2)
C12—C11—C10118.2 (3)O4—C25—H25A109.9
C12—C11—C14121.5 (4)O5—C25—H25A109.9
C10—C11—C14120.3 (4)O4—C25—H25B109.9
C13—C12—C11122.1 (3)O5—C25—H25B109.9
C13—C12—H12118.9H25A—C25—H25B108.3
C11—C12—H12118.9C1—N1—C15118.17 (14)
C12—C13—C8119.6 (3)C1—N1—S1116.13 (11)
C12—C13—H13120.2C15—N1—S1117.24 (12)
C8—C13—H13120.2C21—O4—C25105.78 (19)
C11—C14—H14A109.5C20—O5—C25105.5 (2)
C11—C14—H14B109.5O3—S1—O2119.87 (9)
H14A—C14—H14B109.5O3—S1—N1106.60 (9)
C11—C14—H14C109.5O2—S1—N1105.69 (9)
H14A—C14—H14C109.5O3—S1—C8108.38 (10)
H14B—C14—H14C109.5O2—S1—C8108.60 (10)
N1—C15—C16112.49 (15)N1—S1—C8107.01 (8)
N1—C15—H15A109.1
C6—C1—C2—C3−0.1 (3)O5—C20—C21—C22177.8 (3)
N1—C1—C2—C3176.75 (16)C19—C20—C21—O4−178.8 (2)
C1—C2—C3—C4−1.1 (3)O5—C20—C21—O4−0.2 (3)
C2—C3—C4—C51.2 (3)C20—C21—C22—C230.6 (4)
C3—C4—C5—C6−0.2 (3)O4—C21—C22—C23178.3 (2)
C2—C1—C6—C51.1 (3)C19—C18—C23—C22−1.4 (3)
N1—C1—C6—C5−175.84 (17)C17—C18—C23—C22−177.4 (2)
C2—C1—C6—C7−177.0 (2)C21—C22—C23—C180.5 (4)
N1—C1—C6—C76.1 (3)C17—C16—C24—N2152 (6)
C4—C5—C6—C1−0.9 (3)C15—C16—C24—N2−32 (6)
C4—C5—C6—C7177.2 (2)C6—C1—N1—C15−130.68 (18)
C1—C6—C7—O1−169.7 (3)C2—C1—N1—C1552.5 (2)
C5—C6—C7—O112.2 (5)C6—C1—N1—S182.06 (19)
C13—C8—C9—C100.3 (3)C2—C1—N1—S1−94.77 (18)
S1—C8—C9—C10−177.96 (18)C16—C15—N1—C185.0 (2)
C8—C9—C10—C11−0.2 (4)C16—C15—N1—S1−128.14 (15)
C9—C10—C11—C120.1 (4)C22—C21—O4—C25−179.4 (3)
C9—C10—C11—C14179.0 (3)C20—C21—O4—C25−1.6 (3)
C10—C11—C12—C130.0 (4)O5—C25—O4—C212.8 (3)
C14—C11—C12—C13−178.9 (3)C19—C20—O5—C25−179.6 (3)
C11—C12—C13—C80.1 (4)C21—C20—O5—C251.9 (3)
C9—C8—C13—C12−0.2 (3)O4—C25—O5—C20−2.9 (3)
S1—C8—C13—C12178.05 (19)C1—N1—S1—O3−172.54 (13)
N1—C15—C16—C17−135.66 (18)C15—N1—S1—O339.89 (16)
N1—C15—C16—C2448.7 (2)C1—N1—S1—O2−43.97 (14)
C24—C16—C17—C184.2 (3)C15—N1—S1—O2168.46 (13)
C15—C16—C17—C18−171.09 (18)C1—N1—S1—C871.65 (14)
C16—C17—C18—C23−174.4 (2)C15—N1—S1—C8−75.91 (15)
C16—C17—C18—C199.9 (3)C9—C8—S1—O3−26.56 (19)
C23—C18—C19—C201.2 (3)C13—C8—S1—O3155.17 (17)
C17—C18—C19—C20176.9 (2)C9—C8—S1—O2−158.29 (16)
C18—C19—C20—C21−0.2 (4)C13—C8—S1—O223.45 (19)
C18—C19—C20—O5−178.5 (2)C9—C8—S1—N188.05 (17)
C19—C20—C21—C22−0.8 (4)C13—C8—S1—N1−90.22 (18)
D—H···AD—HH···AD···AD—H···A
C15—H15B···O30.972.402.879 (3)110
C15—H15B···O2i0.972.423.282 (3)148
C23—H23···O1ii0.932.413.114 (3)132
C4—H4···O3iii0.932.593.195 (3)124
C25—H25A···Cg1iv0.972.963.446 (4)112
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C15—H15B⋯O2i 0.972.423.282 (3)148
C23—H23⋯O1ii 0.932.413.114 (3)132
C4—H4⋯O3iii 0.932.593.195 (3)124

Symmetry codes: (i) ; (ii) ; (iii) .

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Pyrrolidine-3-carboxylic acids as endothelin antagonists. 5. Highly selective, potent, and orally active ET(A) antagonists.

Authors:  H S Jae; M Winn; T W von Geldern; B K Sorensen; W J Chiou; B Nguyen; K C Marsh; T J Opgenorth
Journal:  J Med Chem       Date:  2001-11-08       Impact factor: 7.446

4.  Free radical reactions and antioxidant activities of sesamol: pulse radiolytic and biochemical studies.

Authors:  Ravi Joshi; M Sudheer Kumar; K Satyamoorthy; M K Unnikrisnan; Tulsi Mukherjee
Journal:  J Agric Food Chem       Date:  2005-04-06       Impact factor: 5.279

5.  N-Benzyl-N-(2-meth-oxy-phen-yl)benzene-sulfonamide.

Authors:  Wajeeha Tanveer; Mehmet Akkurt; Almas Sattar; Muhammad Athar Abbasi; Islam Ullah Khan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-30

6.  Methyl (Z)-2-{[N-(2-formyl-phen-yl)-4-methyl-benzene-sulfonamido]-meth-yl}-3-phenyl-prop-2-enoate.

Authors:  R Madhanraj; S Murugavel; D Kannan; M Bakthadoss
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-30

7.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  7 in total

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