| Literature DB >> 23284478 |
Rajni Kant1, Vivek K Gupta, Kamini Kapoor, Chetan S Shripanavar, Madhukar B Deshmukh, Kaushik Banerjee.
Abstract
The title mol-ecule, C(17)H(14)F(3)NO(4), consists of two nearly planar fragments, viz. the 2-benzyl-oxypyridine (r.m.s. deviation 0.016 Å) and (E)-3-meth-oxy-prop2-enoic (r.m.s. deviation 0.004 Å) units, which form a dihedral angle of 84.19 (7)°. In the crystal, pairs of O-H⋯O hydrogen bonds link mol-ecules into dimers that are further connected by C-H⋯O and C-H⋯F inter-actions into (001) layers. In addition, π-π stacking inter-actions are observed within a layer between the pyridine and benzene rings [centroid-centroid distance = 3.768 (2) Å]. The F atoms of the trifluoro-methyl group are disordered over two sets of sites in a 0.53 (4):0.47 (4) ratio.Entities:
Year: 2012 PMID: 23284478 PMCID: PMC3515258 DOI: 10.1107/S1600536812042316
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C17H14F3NO4 | |
| Triclinic, | |
| Hall symbol: -P 1 | Melting point: 415 K |
| Mo | |
| Cell parameters from 7723 reflections | |
| θ = 3.5–29.0° | |
| α = 94.721 (4)° | µ = 0.13 mm−1 |
| β = 100.079 (4)° | |
| γ = 110.685 (5)° | Plate, colourless |
| 0.3 × 0.2 × 0.2 mm |
| Oxford Diffraction Xcalibur Sapphire3 diffractometer | 3214 independent reflections |
| Radiation source: fine-focus sealed tube | 1988 reflections with |
| Graphite monochromator | |
| Detector resolution: 16.1049 pixels mm-1 | θmax = 26.0°, θmin = 3.5° |
| ω scan | |
| Absorption correction: multi-scan ( | |
| 19533 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3214 reflections | (Δ/σ)max < 0.001 |
| 253 parameters | Δρmax = 0.24 e Å−3 |
| 6 restraints | Δρmin = −0.40 e Å−3 |
| Experimental. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| O1 | 0.3119 (3) | 0.52862 (18) | 0.05675 (15) | 0.0505 (5) | |
| N1 | 0.5088 (3) | 0.6809 (2) | 0.22310 (18) | 0.0441 (5) | |
| O2 | 0.5218 (3) | 0.88494 (19) | −0.22824 (18) | 0.0579 (6) | |
| O3 | −0.0083 (3) | 0.84278 (19) | −0.05459 (18) | 0.0578 (6) | |
| O4 | 0.2235 (3) | 1.05406 (19) | −0.05040 (19) | 0.0580 (6) | |
| C1 | 0.1465 (4) | 0.9160 (3) | −0.0804 (2) | 0.0403 (6) | |
| C2 | 0.2512 (4) | 0.8515 (2) | −0.1454 (2) | 0.0369 (6) | |
| C3 | 0.4172 (4) | 0.9358 (3) | −0.1689 (2) | 0.0437 (6) | |
| H3 | 0.4622 | 1.0333 | −0.1434 | 0.052* | |
| C4 | 0.1601 (3) | 0.6946 (2) | −0.1883 (2) | 0.0358 (6) | |
| C5 | 0.1822 (3) | 0.5959 (2) | −0.1174 (2) | 0.0371 (6) | |
| C6 | 0.0916 (4) | 0.4512 (3) | −0.1611 (2) | 0.0436 (6) | |
| H6 | 0.1052 | 0.3847 | −0.1142 | 0.052* | |
| C7 | −0.0180 (4) | 0.4060 (3) | −0.2733 (2) | 0.0502 (7) | |
| H7 | −0.0781 | 0.3090 | −0.3016 | 0.060* | |
| C8 | −0.0393 (4) | 0.5030 (3) | −0.3437 (2) | 0.0529 (7) | |
| H8 | −0.1136 | 0.4720 | −0.4194 | 0.063* | |
| C9 | 0.0500 (4) | 0.6462 (3) | −0.3013 (2) | 0.0477 (7) | |
| H9 | 0.0363 | 0.7118 | −0.3492 | 0.057* | |
| C10 | 0.3053 (4) | 0.6487 (3) | 0.0043 (2) | 0.0434 (6) | |
| H10A | 0.4369 | 0.7114 | 0.0023 | 0.052* | |
| H10B | 0.2486 | 0.7015 | 0.0491 | 0.052* | |
| C11 | 0.4141 (4) | 0.5507 (3) | 0.1669 (2) | 0.0402 (6) | |
| C12 | 0.6087 (4) | 0.6917 (3) | 0.3322 (2) | 0.0492 (7) | |
| C13 | 0.6148 (4) | 0.5784 (3) | 0.3857 (2) | 0.0521 (7) | |
| H13 | 0.6848 | 0.5918 | 0.4617 | 0.062* | |
| C14 | 0.5133 (4) | 0.4432 (3) | 0.3227 (2) | 0.0519 (7) | |
| H14 | 0.5142 | 0.3634 | 0.3558 | 0.062* | |
| C15 | 0.4128 (4) | 0.4282 (3) | 0.2127 (2) | 0.0484 (7) | |
| H15 | 0.3444 | 0.3384 | 0.1685 | 0.058* | |
| C16 | 0.7204 (6) | 0.8399 (4) | 0.3923 (3) | 0.0835 (12) | |
| C17 | 0.6970 (5) | 0.9862 (3) | −0.2501 (3) | 0.0698 (9) | |
| H17A | 0.6635 | 1.0336 | −0.3127 | 0.105* | |
| H17B | 0.7790 | 0.9378 | −0.2709 | 0.105* | |
| H17C | 0.7662 | 1.0551 | −0.1813 | 0.105* | |
| F111 | 0.591 (3) | 0.888 (3) | 0.429 (2) | 0.173 (7) | 0.47 (4) |
| F222 | 0.854 (19) | 0.914 (18) | 0.334 (12) | 0.145 (5) | 0.47 (4) |
| F333 | 0.848 (3) | 0.846 (2) | 0.4878 (15) | 0.115 (6) | 0.47 (4) |
| F11A | 0.6329 (17) | 0.9292 (9) | 0.3891 (12) | 0.105 (4) | 0.53 (4) |
| F22A | 0.845 (17) | 0.916 (16) | 0.331 (11) | 0.145 (5) | 0.53 (4) |
| F33A | 0.806 (3) | 0.847 (2) | 0.5018 (9) | 0.109 (5) | 0.53 (4) |
| H41 | 0.160 (6) | 1.088 (4) | −0.012 (3) | 0.101 (13)* |
| O1 | 0.0606 (12) | 0.0338 (10) | 0.0482 (11) | 0.0123 (9) | 0.0007 (9) | 0.0076 (8) |
| N1 | 0.0467 (13) | 0.0386 (12) | 0.0423 (13) | 0.0132 (10) | 0.0035 (10) | 0.0059 (10) |
| O2 | 0.0551 (12) | 0.0447 (11) | 0.0786 (14) | 0.0159 (10) | 0.0339 (11) | 0.0074 (10) |
| O3 | 0.0480 (12) | 0.0373 (10) | 0.0867 (15) | 0.0104 (9) | 0.0282 (11) | −0.0015 (10) |
| O4 | 0.0540 (13) | 0.0321 (10) | 0.0882 (16) | 0.0125 (9) | 0.0301 (11) | −0.0030 (10) |
| C1 | 0.0405 (15) | 0.0310 (13) | 0.0460 (15) | 0.0121 (12) | 0.0054 (12) | 0.0020 (11) |
| C2 | 0.0397 (14) | 0.0312 (13) | 0.0407 (14) | 0.0141 (12) | 0.0089 (11) | 0.0069 (11) |
| C3 | 0.0494 (16) | 0.0353 (14) | 0.0505 (16) | 0.0192 (13) | 0.0141 (13) | 0.0072 (12) |
| C4 | 0.0308 (13) | 0.0357 (13) | 0.0418 (14) | 0.0132 (11) | 0.0108 (11) | 0.0020 (11) |
| C5 | 0.0354 (14) | 0.0349 (14) | 0.0404 (14) | 0.0113 (11) | 0.0124 (11) | 0.0030 (11) |
| C6 | 0.0437 (15) | 0.0334 (14) | 0.0502 (16) | 0.0090 (12) | 0.0133 (13) | 0.0063 (12) |
| C7 | 0.0482 (17) | 0.0356 (15) | 0.0546 (18) | 0.0044 (13) | 0.0108 (13) | −0.0078 (13) |
| C8 | 0.0487 (17) | 0.0549 (18) | 0.0455 (16) | 0.0164 (14) | −0.0004 (13) | −0.0070 (14) |
| C9 | 0.0508 (17) | 0.0488 (16) | 0.0450 (16) | 0.0235 (14) | 0.0052 (13) | 0.0059 (13) |
| C10 | 0.0475 (16) | 0.0315 (13) | 0.0454 (15) | 0.0088 (12) | 0.0079 (12) | 0.0068 (11) |
| C11 | 0.0397 (15) | 0.0384 (14) | 0.0426 (15) | 0.0132 (12) | 0.0111 (12) | 0.0098 (12) |
| C12 | 0.0532 (17) | 0.0442 (16) | 0.0490 (17) | 0.0199 (14) | 0.0048 (13) | 0.0062 (13) |
| C13 | 0.0547 (18) | 0.0600 (19) | 0.0454 (16) | 0.0266 (15) | 0.0069 (13) | 0.0147 (14) |
| C14 | 0.0585 (18) | 0.0467 (17) | 0.0587 (19) | 0.0244 (15) | 0.0173 (15) | 0.0213 (14) |
| C15 | 0.0537 (17) | 0.0372 (15) | 0.0540 (18) | 0.0161 (13) | 0.0123 (14) | 0.0086 (12) |
| C16 | 0.104 (3) | 0.058 (2) | 0.061 (2) | 0.014 (2) | −0.017 (2) | 0.0047 (18) |
| C17 | 0.059 (2) | 0.068 (2) | 0.086 (2) | 0.0171 (17) | 0.0335 (18) | 0.0197 (18) |
| F111 | 0.267 (14) | 0.108 (10) | 0.142 (12) | 0.136 (10) | −0.061 (8) | −0.060 (8) |
| F222 | 0.162 (8) | 0.077 (4) | 0.114 (6) | −0.033 (5) | −0.012 (6) | 0.011 (3) |
| F333 | 0.121 (8) | 0.060 (6) | 0.101 (9) | 0.002 (5) | −0.067 (8) | 0.006 (7) |
| F11A | 0.144 (7) | 0.039 (3) | 0.111 (6) | 0.042 (5) | −0.035 (4) | −0.007 (3) |
| F22A | 0.162 (8) | 0.077 (4) | 0.114 (6) | −0.033 (5) | −0.012 (6) | 0.011 (3) |
| F33A | 0.166 (11) | 0.090 (7) | 0.046 (4) | 0.043 (7) | −0.021 (5) | −0.009 (4) |
| O1—C11 | 1.346 (3) | C8—H8 | 0.9300 |
| O1—C10 | 1.425 (3) | C9—H9 | 0.9300 |
| N1—C11 | 1.313 (3) | C10—H10A | 0.9700 |
| N1—C12 | 1.347 (3) | C10—H10B | 0.9700 |
| O2—C3 | 1.336 (3) | C11—C15 | 1.396 (3) |
| O2—C17 | 1.432 (3) | C12—C13 | 1.370 (4) |
| O3—C1 | 1.240 (3) | C12—C16 | 1.482 (4) |
| O4—C1 | 1.304 (3) | C13—C14 | 1.384 (4) |
| O4—H41 | 0.85 (4) | C13—H13 | 0.9300 |
| C1—C2 | 1.457 (3) | C14—C15 | 1.350 (4) |
| C2—C3 | 1.326 (3) | C14—H14 | 0.9300 |
| C2—C4 | 1.497 (3) | C15—H15 | 0.9300 |
| C3—H3 | 0.9300 | C16—F11A | 1.291 (7) |
| C4—C9 | 1.387 (3) | C16—F33A | 1.324 (8) |
| C4—C5 | 1.394 (3) | C16—F333 | 1.326 (9) |
| C5—C6 | 1.392 (3) | C16—F111 | 1.346 (10) |
| C5—C10 | 1.505 (3) | C16—F222 | 1.350 (10) |
| C6—C7 | 1.376 (4) | C16—F22A | 1.350 (9) |
| C6—H6 | 0.9300 | C17—H17A | 0.9600 |
| C7—C8 | 1.375 (4) | C17—H17B | 0.9600 |
| C7—H7 | 0.9300 | C17—H17C | 0.9600 |
| C8—C9 | 1.375 (4) | ||
| C11—O1—C10 | 118.71 (19) | O1—C10—H10A | 110.0 |
| C11—N1—C12 | 115.5 (2) | C5—C10—H10A | 110.0 |
| C3—O2—C17 | 117.1 (2) | O1—C10—H10B | 110.0 |
| C1—O4—H41 | 115 (3) | C5—C10—H10B | 110.0 |
| O3—C1—O4 | 121.7 (2) | H10A—C10—H10B | 108.4 |
| O3—C1—C2 | 121.4 (2) | N1—C11—O1 | 120.1 (2) |
| O4—C1—C2 | 116.9 (2) | N1—C11—C15 | 124.4 (2) |
| C3—C2—C1 | 118.3 (2) | O1—C11—C15 | 115.5 (2) |
| C3—C2—C4 | 123.2 (2) | N1—C12—C13 | 124.6 (3) |
| C1—C2—C4 | 118.4 (2) | N1—C12—C16 | 114.5 (2) |
| C2—C3—O2 | 122.0 (2) | C13—C12—C16 | 120.9 (3) |
| C2—C3—H3 | 119.0 | C12—C13—C14 | 117.7 (3) |
| O2—C3—H3 | 119.0 | C12—C13—H13 | 121.1 |
| C9—C4—C5 | 119.2 (2) | C14—C13—H13 | 121.1 |
| C9—C4—C2 | 119.2 (2) | C15—C14—C13 | 119.3 (3) |
| C5—C4—C2 | 121.6 (2) | C15—C14—H14 | 120.3 |
| C6—C5—C4 | 119.3 (2) | C13—C14—H14 | 120.3 |
| C6—C5—C10 | 121.6 (2) | C14—C15—C11 | 118.4 (3) |
| C4—C5—C10 | 119.1 (2) | C14—C15—H15 | 120.8 |
| C7—C6—C5 | 120.4 (2) | C11—C15—H15 | 120.8 |
| C7—C6—H6 | 119.8 | F11A—C16—C12 | 118.5 (5) |
| C5—C6—H6 | 119.8 | F33A—C16—C12 | 113.2 (9) |
| C8—C7—C6 | 120.5 (2) | F333—C16—C12 | 112.1 (9) |
| C8—C7—H7 | 119.8 | F111—C16—C12 | 106.9 (10) |
| C6—C7—H7 | 119.8 | F222—C16—C12 | 112 (8) |
| C7—C8—C9 | 119.5 (3) | F22A—C16—C12 | 112 (7) |
| C7—C8—H8 | 120.2 | O2—C17—H17A | 109.5 |
| C9—C8—H8 | 120.2 | O2—C17—H17B | 109.5 |
| C8—C9—C4 | 121.1 (3) | H17A—C17—H17B | 109.5 |
| C8—C9—H9 | 119.4 | O2—C17—H17C | 109.5 |
| C4—C9—H9 | 119.4 | H17A—C17—H17C | 109.5 |
| O1—C10—C5 | 108.36 (19) | H17B—C17—H17C | 109.5 |
| O3—C1—C2—C3 | −179.2 (2) | C12—N1—C11—O1 | −179.1 (2) |
| O4—C1—C2—C3 | 0.5 (4) | C12—N1—C11—C15 | −0.2 (4) |
| O3—C1—C2—C4 | 4.4 (4) | C10—O1—C11—N1 | −1.5 (3) |
| O4—C1—C2—C4 | −175.9 (2) | C10—O1—C11—C15 | 179.5 (2) |
| C1—C2—C3—O2 | −179.9 (2) | C11—N1—C12—C13 | −0.6 (4) |
| C4—C2—C3—O2 | −3.7 (4) | C11—N1—C12—C16 | 177.8 (3) |
| C17—O2—C3—C2 | 179.1 (2) | N1—C12—C13—C14 | 0.9 (4) |
| C3—C2—C4—C9 | −80.6 (3) | C16—C12—C13—C14 | −177.4 (3) |
| C1—C2—C4—C9 | 95.6 (3) | C12—C13—C14—C15 | −0.3 (4) |
| C3—C2—C4—C5 | 99.8 (3) | C13—C14—C15—C11 | −0.5 (4) |
| C1—C2—C4—C5 | −84.0 (3) | N1—C11—C15—C14 | 0.8 (4) |
| C9—C4—C5—C6 | −0.7 (3) | O1—C11—C15—C14 | 179.7 (2) |
| C2—C4—C5—C6 | 178.9 (2) | N1—C12—C16—F11A | 47.7 (9) |
| C9—C4—C5—C10 | 178.7 (2) | C13—C12—C16—F11A | −133.9 (8) |
| C2—C4—C5—C10 | −1.7 (3) | N1—C12—C16—F33A | 175.8 (12) |
| C4—C5—C6—C7 | 0.3 (4) | C13—C12—C16—F33A | −5.8 (13) |
| C10—C5—C6—C7 | −179.1 (2) | N1—C12—C16—F333 | −166.4 (15) |
| C5—C6—C7—C8 | 0.1 (4) | C13—C12—C16—F333 | 12.1 (16) |
| C6—C7—C8—C9 | 0.1 (4) | N1—C12—C16—F111 | 78.5 (15) |
| C7—C8—C9—C4 | −0.5 (4) | C13—C12—C16—F111 | −103.0 (16) |
| C5—C4—C9—C8 | 0.8 (4) | N1—C12—C16—F222 | −60 (8) |
| C2—C4—C9—C8 | −178.8 (2) | C13—C12—C16—F222 | 119 (9) |
| C11—O1—C10—C5 | −179.7 (2) | N1—C12—C16—F22A | −56 (8) |
| C6—C5—C10—O1 | 1.9 (3) | C13—C12—C16—F22A | 123 (8) |
| C4—C5—C10—O1 | −177.5 (2) |
| H··· | ||||
| O4—H41···O3i | 0.85 (4) | 1.78 (4) | 2.626 (3) | 174 (4) |
| C15—H15···O3ii | 0.93 | 2.58 | 3.392 (3) | 146 |
| C17—H17 | 0.96 | 2.41 | 3.135 (14) | 132 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O4—H41⋯O3i | 0.85 (4) | 1.78 (4) | 2.626 (3) | 174 (4) |
| C15—H15⋯O3ii | 0.93 | 2.58 | 3.392 (3) | 146 |
| C17—H17 | 0.96 | 2.41 | 3.135 (14) | 132 |
Symmetry codes: (i) ; (ii) ; (iii) .