| Literature DB >> 23284472 |
Arun M Islor1, Shridhar Malladi, S Sundershan, Thomas Gerber, Eric Hosten, Richard Betz.
Abstract
In the title compound, C(20)H(21)N(3)O(2)·H(2)O, the aza-substitued six-membered ring adopts a (L4)B conformation. In the crystal, classical N-H⋯O, N-H⋯N and O-H⋯O hydrogen bonds connect the entities into a three-dimensional network. Intra-molecular C-H⋯O contacts are also observed.Entities:
Year: 2012 PMID: 23284472 PMCID: PMC3515252 DOI: 10.1107/S1600536812042614
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H21N3O2·H2O | |
| Monoclinic, | Melting point = 428–430 K |
| Hall symbol: -P 2ybc | Mo |
| Cell parameters from 8726 reflections | |
| θ = 2.7–28.3° | |
| µ = 0.09 mm−1 | |
| β = 112.798 (1)° | |
| Block, yellow | |
| 0.41 × 0.34 × 0.18 mm |
| Bruker APEXII CCD diffractometer | 4559 independent reflections |
| Radiation source: fine-focus sealed tube | 3849 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 28.4°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 17882 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4559 reflections | (Δ/σ)max < 0.001 |
| 255 parameters | Δρmax = 0.30 e Å−3 |
| 0 restraints | Δρmin = −0.21 e Å−3 |
| O1 | −0.05984 (10) | 0.17652 (9) | 0.56849 (7) | 0.0425 (2) | |
| O2 | 0.51356 (9) | 0.21848 (9) | 0.56375 (7) | 0.0427 (2) | |
| O3 | 0.79358 (10) | 0.22697 (7) | 0.16165 (6) | 0.0315 (2) | |
| N1 | 0.08635 (11) | 0.45919 (8) | 0.30709 (7) | 0.0313 (2) | |
| N2 | 0.16757 (11) | 0.51591 (8) | 0.38313 (7) | 0.0282 (2) | |
| N3 | 0.08322 (10) | 0.08888 (8) | 0.35769 (6) | 0.0246 (2) | |
| C1 | 0.31972 (13) | 0.50359 (9) | 0.54994 (8) | 0.0277 (2) | |
| C2 | 0.26550 (17) | 0.58840 (11) | 0.58442 (9) | 0.0411 (3) | |
| H2 | 0.1723 | 0.6121 | 0.5501 | 0.049* | |
| C3 | 0.3462 (2) | 0.63860 (12) | 0.66841 (10) | 0.0515 (4) | |
| H3A | 0.3079 | 0.6960 | 0.6915 | 0.062* | |
| C4 | 0.4812 (2) | 0.60560 (14) | 0.71812 (10) | 0.0546 (4) | |
| H4 | 0.5368 | 0.6403 | 0.7754 | 0.066* | |
| C5 | 0.53562 (17) | 0.52211 (18) | 0.68471 (11) | 0.0608 (5) | |
| H5 | 0.6292 | 0.4994 | 0.7192 | 0.073* | |
| C6 | 0.45549 (14) | 0.47036 (14) | 0.60104 (10) | 0.0439 (3) | |
| H6 | 0.4941 | 0.4122 | 0.5791 | 0.053* | |
| C7 | 0.23241 (11) | 0.45289 (9) | 0.45943 (8) | 0.0240 (2) | |
| C8 | 0.19044 (11) | 0.34797 (9) | 0.43179 (7) | 0.0216 (2) | |
| C9 | 0.09862 (13) | 0.35805 (9) | 0.33685 (8) | 0.0285 (2) | |
| H9 | 0.0509 | 0.2992 | 0.2985 | 0.034* | |
| C10 | 0.22607 (10) | 0.24440 (8) | 0.48768 (7) | 0.0204 (2) | |
| H10 | 0.2897 | 0.2617 | 0.5539 | 0.025* | |
| C11 | 0.30207 (11) | 0.16707 (9) | 0.44653 (7) | 0.0219 (2) | |
| C12 | 0.22486 (11) | 0.09714 (9) | 0.37820 (7) | 0.0233 (2) | |
| C13 | 0.02198 (11) | 0.12349 (9) | 0.41735 (7) | 0.0232 (2) | |
| C14 | 0.09434 (11) | 0.19160 (9) | 0.48922 (7) | 0.0221 (2) | |
| C15 | 0.04407 (12) | 0.21902 (9) | 0.56260 (8) | 0.0262 (2) | |
| C16 | 0.12422 (15) | 0.30098 (12) | 0.63511 (9) | 0.0382 (3) | |
| H16A | 0.1371 | 0.3661 | 0.6035 | 0.057* | |
| H16B | 0.2160 | 0.2715 | 0.6749 | 0.057* | |
| H16C | 0.0718 | 0.3188 | 0.6742 | 0.057* | |
| C17 | 0.45534 (12) | 0.17368 (9) | 0.48711 (8) | 0.0275 (2) | |
| C18 | 0.54636 (14) | 0.12884 (13) | 0.43963 (10) | 0.0403 (3) | |
| H18A | 0.5101 | 0.1522 | 0.3738 | 0.061* | |
| H18B | 0.5457 | 0.0501 | 0.4423 | 0.061* | |
| H18C | 0.6425 | 0.1550 | 0.4719 | 0.061* | |
| C19 | −0.12248 (12) | 0.07969 (11) | 0.39365 (9) | 0.0327 (3) | |
| H19A | −0.1567 | 0.0476 | 0.3307 | 0.049* | |
| H19B | −0.1853 | 0.1381 | 0.3949 | 0.049* | |
| H19C | −0.1199 | 0.0247 | 0.4399 | 0.049* | |
| C20 | 0.27302 (13) | 0.02042 (10) | 0.32129 (9) | 0.0320 (3) | |
| H20A | 0.1915 | −0.0152 | 0.2742 | 0.048* | |
| H20B | 0.3352 | −0.0337 | 0.3631 | 0.048* | |
| H20C | 0.3237 | 0.0603 | 0.2895 | 0.048* | |
| H3 | 0.0349 (17) | 0.0442 (14) | 0.3127 (12) | 0.041 (4)* | |
| H2A | 0.1834 (19) | 0.5891 (15) | 0.3761 (12) | 0.052 (5)* | |
| H3B | 0.708 (2) | 0.2444 (15) | 0.1288 (13) | 0.052 (5)* | |
| H3C | 0.8389 (19) | 0.2649 (16) | 0.1352 (12) | 0.051 (5)* |
| O1 | 0.0411 (5) | 0.0483 (6) | 0.0488 (6) | −0.0131 (4) | 0.0291 (4) | −0.0137 (4) |
| O2 | 0.0226 (4) | 0.0535 (6) | 0.0444 (5) | 0.0012 (4) | 0.0046 (4) | −0.0123 (5) |
| O3 | 0.0288 (4) | 0.0270 (5) | 0.0379 (5) | 0.0030 (3) | 0.0118 (4) | 0.0019 (3) |
| N1 | 0.0339 (5) | 0.0258 (5) | 0.0265 (5) | 0.0009 (4) | 0.0034 (4) | 0.0030 (4) |
| N2 | 0.0321 (5) | 0.0202 (5) | 0.0278 (5) | −0.0003 (4) | 0.0068 (4) | 0.0030 (4) |
| N3 | 0.0256 (5) | 0.0228 (5) | 0.0229 (4) | −0.0016 (4) | 0.0066 (4) | −0.0041 (3) |
| C1 | 0.0336 (6) | 0.0220 (5) | 0.0258 (5) | −0.0059 (4) | 0.0098 (4) | 0.0007 (4) |
| C2 | 0.0586 (9) | 0.0276 (7) | 0.0334 (6) | 0.0049 (6) | 0.0137 (6) | −0.0011 (5) |
| C3 | 0.0906 (13) | 0.0282 (7) | 0.0366 (7) | −0.0079 (7) | 0.0256 (8) | −0.0070 (6) |
| C4 | 0.0712 (11) | 0.0577 (10) | 0.0309 (6) | −0.0320 (9) | 0.0153 (7) | −0.0133 (7) |
| C5 | 0.0375 (8) | 0.0912 (14) | 0.0410 (8) | −0.0132 (8) | 0.0014 (6) | −0.0141 (9) |
| C6 | 0.0315 (6) | 0.0564 (9) | 0.0376 (7) | −0.0012 (6) | 0.0065 (5) | −0.0101 (6) |
| C7 | 0.0239 (5) | 0.0216 (5) | 0.0254 (5) | 0.0004 (4) | 0.0084 (4) | 0.0013 (4) |
| C8 | 0.0214 (5) | 0.0197 (5) | 0.0227 (5) | 0.0011 (4) | 0.0072 (4) | 0.0007 (4) |
| C9 | 0.0317 (6) | 0.0227 (6) | 0.0250 (5) | 0.0000 (4) | 0.0043 (4) | 0.0006 (4) |
| C10 | 0.0202 (5) | 0.0187 (5) | 0.0204 (4) | 0.0003 (4) | 0.0055 (4) | −0.0001 (4) |
| C11 | 0.0225 (5) | 0.0197 (5) | 0.0234 (5) | 0.0029 (4) | 0.0087 (4) | 0.0029 (4) |
| C12 | 0.0267 (5) | 0.0196 (5) | 0.0227 (5) | 0.0046 (4) | 0.0087 (4) | 0.0034 (4) |
| C13 | 0.0230 (5) | 0.0207 (5) | 0.0247 (5) | 0.0006 (4) | 0.0080 (4) | 0.0022 (4) |
| C14 | 0.0223 (5) | 0.0205 (5) | 0.0228 (5) | 0.0008 (4) | 0.0080 (4) | 0.0012 (4) |
| C15 | 0.0273 (5) | 0.0251 (6) | 0.0271 (5) | 0.0015 (4) | 0.0116 (4) | −0.0003 (4) |
| C16 | 0.0427 (7) | 0.0440 (8) | 0.0337 (6) | −0.0104 (6) | 0.0212 (5) | −0.0139 (5) |
| C17 | 0.0238 (5) | 0.0244 (6) | 0.0333 (6) | 0.0033 (4) | 0.0101 (4) | 0.0046 (4) |
| C18 | 0.0289 (6) | 0.0501 (8) | 0.0464 (7) | 0.0014 (6) | 0.0195 (6) | −0.0014 (6) |
| C19 | 0.0261 (6) | 0.0351 (7) | 0.0352 (6) | −0.0075 (5) | 0.0100 (5) | −0.0066 (5) |
| C20 | 0.0347 (6) | 0.0287 (6) | 0.0321 (6) | 0.0065 (5) | 0.0123 (5) | −0.0054 (5) |
| O1—C15 | 1.2329 (15) | C8—C10 | 1.5133 (14) |
| O2—C17 | 1.2316 (15) | C9—H9 | 0.9500 |
| O3—H3B | 0.86 (2) | C10—C14 | 1.5219 (14) |
| O3—H3C | 0.87 (2) | C10—C11 | 1.5272 (14) |
| N1—C9 | 1.3279 (16) | C10—H10 | 1.0000 |
| N1—N2 | 1.3468 (14) | C11—C12 | 1.3608 (15) |
| N2—C7 | 1.3549 (14) | C11—C17 | 1.4649 (15) |
| N2—H2A | 0.938 (19) | C12—C20 | 1.5055 (15) |
| N3—C13 | 1.3726 (14) | C13—C14 | 1.3646 (15) |
| N3—C12 | 1.3788 (15) | C13—C19 | 1.4977 (15) |
| N3—H3 | 0.878 (17) | C14—C15 | 1.4565 (15) |
| C1—C6 | 1.3814 (18) | C15—C16 | 1.5025 (16) |
| C1—C2 | 1.3931 (18) | C16—H16A | 0.9800 |
| C1—C7 | 1.4775 (15) | C16—H16B | 0.9800 |
| C2—C3 | 1.387 (2) | C16—H16C | 0.9800 |
| C2—H2 | 0.9500 | C17—C18 | 1.5060 (17) |
| C3—C4 | 1.371 (3) | C18—H18A | 0.9800 |
| C3—H3A | 0.9500 | C18—H18B | 0.9800 |
| C4—C5 | 1.373 (3) | C18—H18C | 0.9800 |
| C4—H4 | 0.9500 | C19—H19A | 0.9800 |
| C5—C6 | 1.391 (2) | C19—H19B | 0.9800 |
| C5—H5 | 0.9500 | C19—H19C | 0.9800 |
| C6—H6 | 0.9500 | C20—H20A | 0.9800 |
| C7—C8 | 1.3888 (15) | C20—H20B | 0.9800 |
| C8—C9 | 1.4079 (14) | C20—H20C | 0.9800 |
| H3B—O3—H3C | 102.1 (16) | C12—C11—C10 | 118.75 (9) |
| C9—N1—N2 | 104.58 (9) | C17—C11—C10 | 115.75 (9) |
| N1—N2—C7 | 112.61 (10) | C11—C12—N3 | 118.60 (10) |
| N1—N2—H2A | 119.0 (11) | C11—C12—C20 | 128.90 (10) |
| C7—N2—H2A | 127.7 (11) | N3—C12—C20 | 112.46 (10) |
| C13—N3—C12 | 123.31 (9) | C14—C13—N3 | 119.18 (10) |
| C13—N3—H3 | 117.2 (11) | C14—C13—C19 | 127.29 (10) |
| C12—N3—H3 | 117.3 (11) | N3—C13—C19 | 113.53 (10) |
| C6—C1—C2 | 118.71 (12) | C13—C14—C15 | 121.77 (10) |
| C6—C1—C7 | 121.70 (11) | C13—C14—C10 | 117.93 (9) |
| C2—C1—C7 | 119.58 (11) | C15—C14—C10 | 120.19 (9) |
| C3—C2—C1 | 120.69 (15) | O1—C15—C14 | 122.76 (11) |
| C3—C2—H2 | 119.7 | O1—C15—C16 | 118.82 (10) |
| C1—C2—H2 | 119.7 | C14—C15—C16 | 118.41 (10) |
| C4—C3—C2 | 120.12 (15) | C15—C16—H16A | 109.5 |
| C4—C3—H3A | 119.9 | C15—C16—H16B | 109.5 |
| C2—C3—H3A | 119.9 | H16A—C16—H16B | 109.5 |
| C3—C4—C5 | 119.63 (13) | C15—C16—H16C | 109.5 |
| C3—C4—H4 | 120.2 | H16A—C16—H16C | 109.5 |
| C5—C4—H4 | 120.2 | H16B—C16—H16C | 109.5 |
| C4—C5—C6 | 120.89 (16) | O2—C17—C11 | 118.77 (11) |
| C4—C5—H5 | 119.6 | O2—C17—C18 | 117.87 (11) |
| C6—C5—H5 | 119.6 | C11—C17—C18 | 123.36 (11) |
| C1—C6—C5 | 119.96 (15) | C17—C18—H18A | 109.5 |
| C1—C6—H6 | 120.0 | C17—C18—H18B | 109.5 |
| C5—C6—H6 | 120.0 | H18A—C18—H18B | 109.5 |
| N2—C7—C8 | 106.64 (9) | C17—C18—H18C | 109.5 |
| N2—C7—C1 | 119.24 (10) | H18A—C18—H18C | 109.5 |
| C8—C7—C1 | 134.00 (10) | H18B—C18—H18C | 109.5 |
| C7—C8—C9 | 103.89 (9) | C13—C19—H19A | 109.5 |
| C7—C8—C10 | 130.29 (9) | C13—C19—H19B | 109.5 |
| C9—C8—C10 | 125.78 (10) | H19A—C19—H19B | 109.5 |
| N1—C9—C8 | 112.27 (10) | C13—C19—H19C | 109.5 |
| N1—C9—H9 | 123.9 | H19A—C19—H19C | 109.5 |
| C8—C9—H9 | 123.9 | H19B—C19—H19C | 109.5 |
| C8—C10—C14 | 110.72 (8) | C12—C20—H20A | 109.5 |
| C8—C10—C11 | 110.53 (8) | C12—C20—H20B | 109.5 |
| C14—C10—C11 | 110.10 (8) | H20A—C20—H20B | 109.5 |
| C8—C10—H10 | 108.5 | C12—C20—H20C | 109.5 |
| C14—C10—H10 | 108.5 | H20A—C20—H20C | 109.5 |
| C11—C10—H10 | 108.5 | H20B—C20—H20C | 109.5 |
| C12—C11—C17 | 125.48 (10) | ||
| C9—N1—N2—C7 | 1.05 (14) | C14—C10—C11—C12 | 33.04 (13) |
| C6—C1—C2—C3 | 0.0 (2) | C8—C10—C11—C17 | 91.88 (11) |
| C7—C1—C2—C3 | −178.86 (13) | C14—C10—C11—C17 | −145.49 (9) |
| C1—C2—C3—C4 | 0.5 (2) | C17—C11—C12—N3 | 169.86 (10) |
| C2—C3—C4—C5 | −0.5 (2) | C10—C11—C12—N3 | −8.51 (15) |
| C3—C4—C5—C6 | −0.1 (3) | C17—C11—C12—C20 | −7.34 (18) |
| C2—C1—C6—C5 | −0.6 (2) | C10—C11—C12—C20 | 174.29 (10) |
| C7—C1—C6—C5 | 178.25 (14) | C13—N3—C12—C11 | −18.40 (16) |
| C4—C5—C6—C1 | 0.7 (3) | C13—N3—C12—C20 | 159.25 (10) |
| N1—N2—C7—C8 | −0.31 (13) | C12—N3—C13—C14 | 16.24 (16) |
| N1—N2—C7—C1 | −176.91 (10) | C12—N3—C13—C19 | −163.95 (10) |
| C6—C1—C7—N2 | −128.63 (13) | N3—C13—C14—C15 | −171.08 (10) |
| C2—C1—C7—N2 | 50.24 (16) | C19—C13—C14—C15 | 9.13 (18) |
| C6—C1—C7—C8 | 55.9 (2) | N3—C13—C14—C10 | 12.63 (15) |
| C2—C1—C7—C8 | −125.23 (15) | C19—C13—C14—C10 | −167.15 (11) |
| N2—C7—C8—C9 | −0.53 (12) | C8—C10—C14—C13 | 87.54 (12) |
| C1—C7—C8—C9 | 175.35 (13) | C11—C10—C14—C13 | −34.99 (13) |
| N2—C7—C8—C10 | −178.25 (10) | C8—C10—C14—C15 | −88.80 (11) |
| C1—C7—C8—C10 | −2.4 (2) | C11—C10—C14—C15 | 148.67 (10) |
| N2—N1—C9—C8 | −1.40 (14) | C13—C14—C15—O1 | 5.77 (18) |
| C7—C8—C9—N1 | 1.23 (14) | C10—C14—C15—O1 | −178.02 (11) |
| C10—C8—C9—N1 | 179.10 (10) | C13—C14—C15—C16 | −175.47 (11) |
| C7—C8—C10—C14 | 119.14 (12) | C10—C14—C15—C16 | 0.73 (16) |
| C9—C8—C10—C14 | −58.14 (14) | C12—C11—C17—O2 | −160.83 (12) |
| C7—C8—C10—C11 | −118.59 (12) | C10—C11—C17—O2 | 17.58 (16) |
| C9—C8—C10—C11 | 64.13 (14) | C12—C11—C17—C18 | 19.51 (18) |
| C8—C10—C11—C12 | −89.60 (11) | C10—C11—C17—C18 | −162.08 (11) |
| H··· | ||||
| N2—H2 | 0.938 (19) | 1.855 (19) | 2.7822 (14) | 169.1 (16) |
| N3—H3···N1ii | 0.878 (17) | 2.075 (17) | 2.9454 (13) | 171.1 (15) |
| O3—H3 | 0.86 (2) | 1.92 (2) | 2.7838 (13) | 175.8 (17) |
| O3—H3 | 0.87 (2) | 1.88 (2) | 2.7372 (14) | 169.8 (18) |
| C6—H6···O2 | 0.95 | 2.44 | 3.282 (2) | 148 |
| C10—H10···O2 | 1.00 | 2.33 | 2.7624 (13) | 105 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N2—H2 | 0.938 (19) | 1.855 (19) | 2.7822 (14) | 169.1 (16) |
| N3—H3⋯N1ii | 0.878 (17) | 2.075 (17) | 2.9454 (13) | 171.1 (15) |
| O3—H3 | 0.86 (2) | 1.92 (2) | 2.7838 (13) | 175.8 (17) |
| O3—H3 | 0.87 (2) | 1.88 (2) | 2.7372 (14) | 169.8 (18) |
| C6—H6⋯O2 | 0.95 | 2.44 | 3.282 (2) | 148 |
| C10—H10⋯O2 | 1.00 | 2.33 | 2.7624 (13) | 105 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .