| Literature DB >> 23284471 |
Arun M Islor1, B Chandrakantha, Prakash Shetty, Thomas Gerber, Eric Hosten, Richard Betz.
Abstract
In the crystal structur of the achiral title compound, C(9)H(8)N(2), N-H⋯N hydrogen bonds connect the mol-ecules into zigzag chains in [100]. Weak inter-molecular N-H⋯π inter-actions further consolidate the crystal packing.Entities:
Year: 2012 PMID: 23284471 PMCID: PMC3515251 DOI: 10.1107/S1600536812042626
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H8N2 | |
| Melting point = 366–368 K | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 5242 reflections |
| θ = 2.7–28.3° | |
| µ = 0.08 mm−1 | |
| Block, colourless | |
| 0.55 × 0.52 × 0.15 mm | |
| Bruker APEXII CCD diffractometer | 1077 independent reflections |
| Radiation source: fine-focus sealed tube | 1015 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 28.3°, θmin = 3.1° |
| Absorption correction: multi-scan ( | |
| 6898 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1077 reflections | (Δ/σ)max < 0.001 |
| 108 parameters | Δρmax = 0.23 e Å−3 |
| 0 restraints | Δρmin = −0.20 e Å−3 |
| Refinement. Due to the absence of a strong anomalous scatterer, the Flack parameter is meaningless. Thus, Friedel opposites (737 pairs) have been merged and the item was removed from the CIF. |
| N1 | 0.25487 (15) | 0.26319 (16) | 0.38612 (8) | 0.0280 (3) | |
| N2 | −0.18546 (17) | 0.08305 (19) | 0.39280 (11) | 0.0359 (3) | |
| H2A | −0.258 (3) | 0.023 (3) | 0.3568 (15) | 0.056 (6)* | |
| H2B | −0.198 (2) | 0.098 (3) | 0.4628 (17) | 0.043 (5)* | |
| C1 | 0.30327 (17) | 0.23241 (17) | 0.28353 (9) | 0.0249 (3) | |
| C2 | 0.09884 (17) | 0.21121 (18) | 0.41581 (9) | 0.0277 (3) | |
| H2 | 0.0663 | 0.2323 | 0.4869 | 0.033* | |
| C3 | −0.02593 (17) | 0.12565 (16) | 0.35016 (9) | 0.0253 (3) | |
| C4 | 0.02155 (18) | 0.09412 (17) | 0.24707 (10) | 0.0265 (3) | |
| H4 | −0.0576 | 0.0376 | 0.2003 | 0.032* | |
| C5 | 0.18933 (16) | 0.14693 (17) | 0.21189 (9) | 0.0244 (3) | |
| C6 | 0.24840 (19) | 0.11883 (19) | 0.10713 (10) | 0.0299 (3) | |
| H6 | 0.1743 | 0.0609 | 0.0580 | 0.036* | |
| C7 | 0.4113 (2) | 0.17449 (19) | 0.07635 (10) | 0.0344 (3) | |
| H7 | 0.4488 | 0.1553 | 0.0059 | 0.041* | |
| C8 | 0.52397 (19) | 0.2599 (2) | 0.14793 (11) | 0.0353 (3) | |
| H8 | 0.6366 | 0.2982 | 0.1256 | 0.042* | |
| C9 | 0.47097 (17) | 0.28794 (19) | 0.25005 (11) | 0.0313 (3) | |
| H9 | 0.5474 | 0.3448 | 0.2982 | 0.038* |
| N1 | 0.0323 (5) | 0.0323 (6) | 0.0193 (5) | −0.0026 (5) | −0.0030 (4) | −0.0003 (4) |
| N2 | 0.0318 (6) | 0.0443 (7) | 0.0316 (6) | −0.0081 (5) | 0.0052 (5) | −0.0086 (6) |
| C1 | 0.0277 (6) | 0.0263 (6) | 0.0207 (5) | 0.0017 (5) | −0.0018 (5) | 0.0009 (5) |
| C2 | 0.0340 (6) | 0.0299 (6) | 0.0191 (5) | −0.0004 (5) | −0.0012 (5) | −0.0007 (5) |
| C3 | 0.0279 (6) | 0.0238 (5) | 0.0243 (6) | 0.0009 (5) | −0.0004 (5) | −0.0006 (5) |
| C4 | 0.0306 (6) | 0.0264 (6) | 0.0226 (5) | −0.0013 (5) | −0.0021 (5) | −0.0045 (5) |
| C5 | 0.0303 (6) | 0.0228 (6) | 0.0202 (5) | 0.0027 (5) | −0.0006 (5) | −0.0003 (5) |
| C6 | 0.0382 (7) | 0.0298 (6) | 0.0218 (6) | 0.0032 (5) | 0.0015 (5) | −0.0037 (5) |
| C7 | 0.0430 (7) | 0.0348 (7) | 0.0254 (5) | 0.0059 (6) | 0.0084 (6) | −0.0008 (5) |
| C8 | 0.0320 (6) | 0.0389 (7) | 0.0350 (7) | 0.0010 (6) | 0.0070 (6) | 0.0052 (6) |
| C9 | 0.0294 (7) | 0.0347 (7) | 0.0298 (6) | −0.0008 (5) | −0.0009 (5) | 0.0008 (6) |
| N1—C2 | 1.3091 (17) | C4—C5 | 1.4133 (18) |
| N1—C1 | 1.3740 (16) | C4—H4 | 0.9500 |
| N2—C3 | 1.3701 (17) | C5—C6 | 1.4205 (17) |
| N2—H2A | 0.85 (2) | C6—C7 | 1.369 (2) |
| N2—H2B | 0.90 (2) | C6—H6 | 0.9500 |
| C1—C9 | 1.4122 (18) | C7—C8 | 1.410 (2) |
| C1—C5 | 1.4167 (17) | C7—H7 | 0.9500 |
| C2—C3 | 1.4231 (17) | C8—C9 | 1.375 (2) |
| C2—H2 | 0.9500 | C8—H8 | 0.9500 |
| C3—C4 | 1.3792 (17) | C9—H9 | 0.9500 |
| C2—N1—C1 | 117.72 (11) | C4—C5—C1 | 118.88 (11) |
| C3—N2—H2A | 119.4 (14) | C4—C5—C6 | 122.66 (12) |
| C3—N2—H2B | 116.8 (12) | C1—C5—C6 | 118.45 (12) |
| H2A—N2—H2B | 122.1 (18) | C7—C6—C5 | 120.52 (13) |
| N1—C1—C9 | 118.50 (12) | C7—C6—H6 | 119.7 |
| N1—C1—C5 | 121.52 (12) | C5—C6—H6 | 119.7 |
| C9—C1—C5 | 119.98 (11) | C6—C7—C8 | 120.78 (12) |
| N1—C2—C3 | 125.27 (11) | C6—C7—H7 | 119.6 |
| N1—C2—H2 | 117.4 | C8—C7—H7 | 119.6 |
| C3—C2—H2 | 117.4 | C9—C8—C7 | 120.04 (13) |
| N2—C3—C4 | 124.50 (12) | C9—C8—H8 | 120.0 |
| N2—C3—C2 | 118.07 (11) | C7—C8—H8 | 120.0 |
| C4—C3—C2 | 117.42 (12) | C8—C9—C1 | 120.22 (13) |
| C3—C4—C5 | 119.19 (12) | C8—C9—H9 | 119.9 |
| C3—C4—H4 | 120.4 | C1—C9—H9 | 119.9 |
| C5—C4—H4 | 120.4 | ||
| C2—N1—C1—C9 | 179.86 (12) | C9—C1—C5—C4 | −179.41 (11) |
| C2—N1—C1—C5 | −0.20 (19) | N1—C1—C5—C6 | −179.74 (12) |
| C1—N1—C2—C3 | −0.3 (2) | C9—C1—C5—C6 | 0.20 (18) |
| N1—C2—C3—N2 | −178.55 (13) | C4—C5—C6—C7 | 179.12 (12) |
| N1—C2—C3—C4 | 0.3 (2) | C1—C5—C6—C7 | −0.5 (2) |
| N2—C3—C4—C5 | 178.95 (12) | C5—C6—C7—C8 | 0.3 (2) |
| C2—C3—C4—C5 | 0.15 (18) | C6—C7—C8—C9 | 0.1 (2) |
| C3—C4—C5—C1 | −0.61 (18) | C7—C8—C9—C1 | −0.4 (2) |
| C3—C4—C5—C6 | 179.80 (12) | N1—C1—C9—C8 | −179.82 (13) |
| N1—C1—C5—C4 | 0.66 (18) | C5—C1—C9—C8 | 0.2 (2) |
| H··· | ||||
| N2—H2 | 0.90 (2) | 2.22 (2) | 3.0761 (17) | 158.2 (18) |
| N2—H2 | 0.85 (2) | 2.60 (2) | 3.3101 (15) | 142.3 (19) |
Hydrogen-bond geometry (Å, °)
Cg is the centroid of the C1/C5–C9 ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N2—H2 | 0.90 (2) | 2.22 (2) | 3.0761 (17) | 158.2 (18) |
| N2—H2 | 0.85 (2) | 2.60 (2) | 3.3101 (15) | 142.3 (19) |
Symmetry codes: (i) ; (ii) .