Literature DB >> 23284461

5-[(Z)-2,3-Dimeth-oxy-benzyl-idene]-1,2,4-triazolo[3,2-b][1,3]thia-zol-6(5H)-one.

Lu Guo1, Gao-Tong Lin, Jia Wang, Li Ni, Ren-Shan Ge.   

Abstract

The title compound, C(13)H(11)N(3)O(3)S, was synthesized from 1H-1,2,4-triazole-5-thiol in a one pot reaction. The fused thia-zolo[3,2-b][1,2,4]triazole system is essentially coplanar with the benzene ring: they enclose an inter-planar angle of 1.37 (13)°. The olefinic double bond is in a Z conformation. In the crystal, C-H⋯N hydrogen bonds link the mol-ecules into double layers parallel to the ab plane.

Entities:  

Year:  2012        PMID: 23284461      PMCID: PMC3515241          DOI: 10.1107/S1600536812042559

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Özbey et al. (1999 ▶); Köysal et al. (2004 ▶). For background to the biological properties of fused thia­zolo[3,2-b][1,2,4]triazol derivatives, see: El-Sherif et al. (2006 ▶); Gilbertsen et al. (1999 ▶); Karthikeyan (2009 ▶); Lesyk et al. (2007 ▶); Martin et al. (1999 ▶); Tozkoparan et al. (2000 ▶, 2002 ▶, 2007 ▶).

Experimental

Crystal data

C13H11N3O3S M = 289.31 Monoclinic, a = 11.5904 (13) Å b = 7.0570 (8) Å c = 16.4519 (18) Å β = 107.445 (2)° V = 1283.8 (2) Å3 Z = 4 Mo Kα radiation μ = 0.26 mm−1 T = 293 K 0.32 × 0.22 × 0.20 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2002 ▶) T min = 0.314, T max = 1.000 3567 measured reflections 2096 independent reflections 2022 reflections with I > 2σ(I) R int = 0.074

Refinement

R[F 2 > 2σ(F 2)] = 0.050 wR(F 2) = 0.135 S = 1.07 2096 reflections 184 parameters 1 restraint H-atom parameters constrained Δρmax = 0.30 e Å−3 Δρmin = −0.40 e Å−3 Absolute structure: Flack (1983 ▶), 724 Friedel pairs Flack parameter: 0.00 (10) Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812042559/fy2070sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812042559/fy2070Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812042559/fy2070Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H11N3O3SF(000) = 600
Mr = 289.31Dx = 1.497 Mg m3
Monoclinic, C2Mo Kα radiation, λ = 0.71073 Å
a = 11.5904 (13) ÅCell parameters from 2670 reflections
b = 7.0570 (8) Åθ = 5.2–55.1°
c = 16.4519 (18) ŵ = 0.26 mm1
β = 107.445 (2)°T = 293 K
V = 1283.8 (2) Å3Prismatic, green
Z = 40.32 × 0.22 × 0.20 mm
Bruker SMART CCD area-detector diffractometer2096 independent reflections
Radiation source: fine-focus sealed tube2022 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.074
φ and ω scansθmax = 26.0°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Bruker, 2002)h = −12→14
Tmin = 0.314, Tmax = 1.000k = −6→8
3567 measured reflectionsl = −20→17
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.050w = 1/[σ2(Fo2) + (0.102P)2] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.135(Δ/σ)max < 0.001
S = 1.07Δρmax = 0.30 e Å3
2096 reflectionsΔρmin = −0.40 e Å3
184 parametersExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
1 restraintExtinction coefficient: 0.004
Primary atom site location: structure-invariant direct methodsAbsolute structure: Flack (1983), 724 Friedel pairs
Secondary atom site location: difference Fourier mapFlack parameter: 0.00 (10)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S1−0.01455 (7)1.05191 (12)0.10793 (4)0.0509 (3)
N1−0.0780 (2)1.3372 (4)0.18332 (14)0.0416 (5)
N2−0.1377 (2)1.5049 (4)0.17612 (17)0.0508 (7)
N3−0.1513 (3)1.3773 (5)0.04552 (16)0.0590 (8)
O10.00045 (19)1.2734 (4)0.32636 (12)0.0554 (6)
O20.21278 (18)0.7058 (4)0.40934 (11)0.0527 (6)
O30.3203 (2)0.3716 (4)0.39185 (15)0.0661 (7)
C1−0.1790 (3)1.5220 (5)0.0926 (2)0.0568 (9)
H1−0.22451.62620.06690.068*
C2−0.0877 (3)1.2682 (5)0.10527 (16)0.0464 (7)
C3−0.0130 (2)1.2290 (4)0.25439 (15)0.0389 (6)
C40.0302 (2)1.0558 (5)0.22076 (14)0.0380 (6)
C50.0954 (2)0.9259 (4)0.27501 (16)0.0395 (6)
H50.10930.95510.33230.047*
C60.1475 (2)0.7493 (5)0.25979 (16)0.0390 (6)
C70.1392 (3)0.6801 (5)0.17817 (17)0.0441 (7)
H70.09750.74970.13040.053*
C80.1919 (3)0.5107 (5)0.16797 (18)0.0468 (7)
H80.18470.46590.11350.056*
C90.2555 (3)0.4070 (5)0.23833 (19)0.0464 (7)
H90.29300.29460.23080.056*
C100.2643 (2)0.4684 (5)0.32006 (18)0.0455 (7)
C110.2112 (2)0.6410 (5)0.33035 (17)0.0416 (6)
C120.3298 (3)0.7237 (7)0.47229 (19)0.0620 (10)
H12A0.35200.60480.50110.093*
H12B0.32620.81950.51290.093*
H12C0.38890.75850.44470.093*
C130.3783 (4)0.1988 (7)0.3845 (3)0.0700 (10)
H13A0.32090.11380.34820.105*
H13B0.41050.14270.43990.105*
H13C0.44290.22250.36060.105*
U11U22U33U12U13U23
S10.0663 (5)0.0506 (5)0.0329 (3)0.0151 (4)0.0104 (3)−0.0014 (3)
N10.0420 (11)0.0388 (14)0.0433 (11)0.0040 (10)0.0117 (9)−0.0009 (10)
N20.0488 (13)0.0465 (18)0.0533 (13)0.0060 (12)0.0095 (10)0.0010 (12)
N30.0694 (16)0.0561 (19)0.0425 (13)0.0161 (16)0.0031 (12)0.0062 (13)
O10.0653 (13)0.0592 (16)0.0403 (10)0.0085 (12)0.0136 (9)−0.0072 (11)
O20.0555 (11)0.0690 (17)0.0331 (9)0.0154 (11)0.0126 (8)0.0032 (10)
O30.0809 (15)0.0590 (18)0.0581 (13)0.0246 (13)0.0205 (11)0.0176 (12)
C10.0598 (16)0.047 (2)0.0556 (16)0.0153 (16)0.0057 (14)0.0117 (16)
C20.0492 (14)0.0461 (17)0.0409 (13)0.0050 (14)0.0090 (11)−0.0015 (13)
C30.0373 (12)0.0418 (17)0.0376 (12)−0.0009 (12)0.0113 (10)−0.0036 (12)
C40.0377 (11)0.0444 (16)0.0315 (10)0.0002 (13)0.0096 (9)−0.0006 (13)
C50.0381 (11)0.0444 (17)0.0367 (12)0.0002 (12)0.0125 (10)0.0006 (12)
C60.0366 (11)0.0429 (16)0.0376 (12)−0.0013 (12)0.0112 (10)0.0020 (12)
C70.0462 (14)0.0458 (17)0.0387 (12)0.0012 (13)0.0102 (11)0.0008 (13)
C80.0521 (14)0.047 (2)0.0433 (13)−0.0039 (14)0.0167 (11)−0.0081 (13)
C90.0473 (14)0.0385 (16)0.0573 (16)0.0006 (13)0.0217 (12)−0.0038 (14)
C100.0426 (13)0.0462 (17)0.0478 (15)0.0039 (13)0.0136 (12)0.0076 (12)
C110.0395 (12)0.0473 (17)0.0395 (13)0.0016 (13)0.0139 (10)0.0017 (12)
C120.0649 (19)0.073 (3)0.0406 (15)0.0098 (19)0.0047 (14)−0.0010 (15)
C130.066 (2)0.058 (2)0.079 (2)0.0158 (19)0.0098 (18)0.014 (2)
S1—C21.740 (3)C5—H50.9300
S1—C41.772 (2)C6—C111.401 (4)
N1—C21.346 (4)C6—C71.405 (4)
N1—N21.358 (4)C7—C81.375 (5)
N1—C31.411 (4)C7—H70.9300
N2—C11.317 (4)C8—C91.381 (4)
N3—C21.291 (4)C8—H80.9300
N3—C11.377 (5)C9—C101.387 (4)
O1—C31.189 (3)C9—H90.9300
O2—C111.373 (3)C10—C111.397 (5)
O2—C121.444 (4)C12—H12A0.9600
O3—C101.350 (4)C12—H12B0.9600
O3—C131.415 (5)C12—H12C0.9600
C1—H10.9300C13—H13A0.9600
C3—C41.489 (4)C13—H13B0.9600
C4—C51.343 (4)C13—H13C0.9600
C5—C61.439 (4)
C2—S1—C490.02 (15)C8—C7—H7119.6
C2—N1—N2109.7 (2)C6—C7—H7119.6
C2—N1—C3117.8 (3)C7—C8—C9120.2 (3)
N2—N1—C3132.5 (2)C7—C8—H8119.9
C1—N2—N1100.8 (3)C9—C8—H8119.9
C2—N3—C1100.9 (3)C8—C9—C10120.8 (3)
C11—O2—C12116.8 (2)C8—C9—H9119.6
C10—O3—C13118.6 (3)C10—C9—H9119.6
N2—C1—N3116.5 (3)O3—C10—C9124.5 (3)
N2—C1—H1121.8O3—C10—C11116.7 (3)
N3—C1—H1121.8C9—C10—C11118.9 (3)
N3—C2—N1112.1 (3)O2—C11—C10121.6 (3)
N3—C2—S1134.8 (2)O2—C11—C6117.2 (3)
N1—C2—S1113.1 (2)C10—C11—C6121.1 (3)
O1—C3—N1124.1 (3)O2—C12—H12A109.5
O1—C3—C4128.9 (3)O2—C12—H12B109.5
N1—C3—C4107.0 (2)H12A—C12—H12B109.5
C5—C4—C3119.9 (2)O2—C12—H12C109.5
C5—C4—S1128.0 (2)H12A—C12—H12C109.5
C3—C4—S1112.1 (2)H12B—C12—H12C109.5
C4—C5—C6131.1 (2)O3—C13—H13A109.5
C4—C5—H5114.5O3—C13—H13B109.5
C6—C5—H5114.5H13A—C13—H13B109.5
C11—C6—C7118.0 (3)O3—C13—H13C109.5
C11—C6—C5118.2 (2)H13A—C13—H13C109.5
C7—C6—C5123.7 (3)H13B—C13—H13C109.5
C8—C7—C6120.9 (3)
C2—N1—N2—C10.1 (3)C3—C4—C5—C6−179.9 (3)
C3—N1—N2—C1−179.0 (3)S1—C4—C5—C6−0.1 (5)
N1—N2—C1—N30.5 (4)C4—C5—C6—C11−179.5 (3)
C2—N3—C1—N2−0.9 (4)C4—C5—C6—C71.2 (5)
C1—N3—C2—N10.9 (4)C11—C6—C7—C80.1 (4)
C1—N3—C2—S1179.5 (3)C5—C6—C7—C8179.4 (3)
N2—N1—C2—N3−0.7 (4)C6—C7—C8—C9−0.9 (4)
C3—N1—C2—N3178.5 (3)C7—C8—C9—C101.9 (4)
N2—N1—C2—S1−179.61 (19)C13—O3—C10—C92.4 (5)
C3—N1—C2—S1−0.4 (3)C13—O3—C10—C11−178.2 (3)
C4—S1—C2—N3−178.2 (4)C8—C9—C10—O3177.1 (3)
C4—S1—C2—N10.4 (2)C8—C9—C10—C11−2.2 (4)
C2—N1—C3—O1−178.9 (3)C12—O2—C11—C1055.9 (4)
N2—N1—C3—O10.1 (5)C12—O2—C11—C6−128.0 (3)
C2—N1—C3—C40.2 (3)O3—C10—C11—O2−1.9 (4)
N2—N1—C3—C4179.1 (3)C9—C10—C11—O2177.5 (3)
O1—C3—C4—C5−1.0 (5)O3—C10—C11—C6−177.9 (3)
N1—C3—C4—C5180.0 (2)C9—C10—C11—C61.5 (4)
O1—C3—C4—S1179.2 (3)C7—C6—C11—O2−176.6 (3)
N1—C3—C4—S10.2 (3)C5—C6—C11—O24.1 (4)
C2—S1—C4—C5179.9 (3)C7—C6—C11—C10−0.5 (4)
C2—S1—C4—C3−0.3 (2)C5—C6—C11—C10−179.8 (2)
D—H···AD—HH···AD···AD—H···A
C9—H9···N2i0.932.463.375 (4)167
C8—H8···N3ii0.932.603.529 (4)173
C1—H1···N3iii0.932.653.556 (4)164
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C9—H9⋯N2i 0.932.463.375 (4)167
C8—H8⋯N3ii 0.932.603.529 (4)173
C1—H1⋯N3iii 0.932.653.556 (4)164

Symmetry codes: (i) ; (ii) ; (iii) .

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