Literature DB >> 23284456

Dibenzo[b,f][1,4]thia-zepin-11-yl-diethyl-amine.

Maria Altamura1, Antonio Guidi, Loic Jierry, Paola Paoli, Patrizia Rossi.   

Abstract

In the title compound, C(17)H(18)N(2)S, the thia-zepine ring adopts a boat conformation and the dihedral angle between the benzene rings is 75.92 (5)°, resulting in a butterfly-like conformation. In the crystal, mol-ecules are connected via weak C(aromatic)-H⋯N contacts involving the imine N atom as acceptor and through a quite short C-H⋯π inter-action. The resulting mol-ecular chains propagate along the c-axis direction.

Entities:  

Year:  2012        PMID: 23284456      PMCID: PMC3515236          DOI: 10.1107/S1600536812042328

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For ‘privileged structures’, that is ‘structures able to provide high affinity ligands for more than one type of receptor’, see: Evans et al. (1988 ▶); Patchett & Nargund (2000 ▶); Fedi et al. (2008 ▶). For the clinical use of dibenzothia­zepine derivatives, see: Ganesh et al. (2011 ▶); Pettersson et al. (2009 ▶); Riedel et al. (2007 ▶); Warawa et al. (2001 ▶). For structure–property relationships in (6,7,6)-tricyclic ring systems, see: Ravikumar & Sridhar (2005 ▶); Altamura et al. (2008 ▶, 2009 ▶, 2011 ▶). For geometrical data and descriptors, see: Duax et al. (1976 ▶); Bertolasi et al. (1982 ▶); Allen et al. (1987 ▶).

Experimental

Crystal data

C17H18N2S M = 282.40 Monoclinic, a = 12.0137 (2) Å b = 8.2257 (1) Å c = 15.0513 (2) Å β = 102.952 (1)° V = 1449.54 (4) Å3 Z = 4 Cu Kα radiation μ = 1.89 mm−1 T = 150 K 0.20 × 0.18 × 0.03 mm

Data collection

Oxford Diffraction XcaliburPX diffractometer Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2006 ▶) T min = 0.722, T max = 0.945 6173 measured reflections 2364 independent reflections 1837 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.086 S = 1.05 2364 reflections 181 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.26 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2006 ▶); cell refinement: CrysAlis CCD; data reduction: CrysAlis RED (Oxford Diffraction, 2006 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: PARST (Nardelli, 1995 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536812042328/nc2296sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812042328/nc2296Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H18N2SF(000) = 600
Mr = 282.40Dx = 1.294 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.5418 Å
a = 12.0137 (2) ÅCell parameters from 3716 reflections
b = 8.2257 (1) Åθ = 3.8–64.6°
c = 15.0513 (2) ŵ = 1.89 mm1
β = 102.952 (1)°T = 150 K
V = 1449.54 (4) Å3Platelet, colourless
Z = 40.20 × 0.18 × 0.03 mm
Oxford Diffraction XcaliburPX diffractometer2364 independent reflections
Radiation source: Enhance (Cu) X-ray Source1837 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.019
Detector resolution: 8.1241 pixels mm-1θmax = 64.7°, θmin = 3.8°
ω scansh = −13→11
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2006)k = −9→9
Tmin = 0.722, Tmax = 0.945l = −16→17
6173 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.086H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0564P)2] where P = (Fo2 + 2Fc2)/3
2364 reflections(Δ/σ)max < 0.001
181 parametersΔρmax = 0.23 e Å3
0 restraintsΔρmin = −0.26 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.83045 (3)0.13292 (5)0.85602 (3)0.01958 (15)
N10.67962 (11)0.44375 (17)0.84814 (9)0.0179 (3)
N20.51660 (11)0.33602 (17)0.87760 (9)0.0181 (3)
C10.69759 (13)0.2400 (2)0.97172 (11)0.0177 (4)
C20.78691 (14)0.1378 (2)0.96160 (11)0.0175 (4)
C30.84541 (14)0.0447 (2)1.03477 (11)0.0198 (4)
H30.9047−0.02641.02680.024*
C40.81731 (14)0.0556 (2)1.11916 (11)0.0211 (4)
H40.8564−0.00891.16870.025*
C50.73182 (14)0.1613 (2)1.13056 (11)0.0211 (4)
H50.71370.17151.18860.025*
C60.67280 (13)0.2522 (2)1.05782 (11)0.0197 (4)
H60.61430.32411.06660.024*
C70.63322 (13)0.3418 (2)0.89419 (11)0.0169 (4)
C80.79782 (14)0.4649 (2)0.85930 (11)0.0188 (4)
C90.87701 (14)0.3391 (2)0.85923 (11)0.0188 (4)
C100.99058 (14)0.3727 (2)0.85997 (11)0.0237 (4)
H101.04300.28610.86040.028*
C111.02769 (15)0.5322 (2)0.86002 (12)0.0290 (5)
H111.10510.55510.85960.035*
C120.95124 (15)0.6578 (2)0.86075 (12)0.0280 (5)
H120.97670.76730.86180.034*
C130.83815 (14)0.6251 (2)0.86002 (11)0.0218 (4)
H130.78670.71280.86000.026*
C140.45010 (14)0.2064 (2)0.90866 (11)0.0200 (4)
H14A0.50320.12370.94210.024*
H14B0.40140.15290.85480.024*
C150.37461 (15)0.2692 (2)0.97035 (12)0.0252 (4)
H15A0.33240.17820.98910.038*
H15B0.32060.34930.93710.038*
H15C0.42240.32031.02450.038*
C160.45022 (14)0.4423 (2)0.80635 (11)0.0188 (4)
H16A0.48650.55100.81120.023*
H16B0.37230.45550.81700.023*
C170.44140 (14)0.3772 (2)0.71044 (11)0.0209 (4)
H17A0.39650.45270.66610.031*
H17B0.40390.27070.70460.031*
H17C0.51810.36620.69880.031*
U11U22U33U12U13U23
S10.0205 (2)0.0207 (3)0.0190 (2)−0.00074 (18)0.00747 (17)−0.00055 (18)
N10.0153 (7)0.0199 (8)0.0191 (7)−0.0019 (6)0.0049 (6)−0.0011 (6)
N20.0153 (7)0.0197 (8)0.0196 (8)−0.0014 (6)0.0042 (6)0.0016 (6)
C10.0148 (8)0.0195 (9)0.0187 (9)−0.0059 (7)0.0034 (7)−0.0009 (7)
C20.0163 (9)0.0188 (9)0.0177 (9)−0.0058 (7)0.0041 (7)−0.0019 (7)
C30.0170 (9)0.0189 (10)0.0232 (9)−0.0023 (7)0.0041 (7)−0.0009 (8)
C40.0190 (10)0.0234 (10)0.0190 (9)−0.0051 (8)0.0003 (7)0.0029 (8)
C50.0192 (9)0.0286 (10)0.0156 (9)−0.0079 (8)0.0043 (7)−0.0029 (7)
C60.0154 (9)0.0233 (10)0.0202 (9)−0.0046 (8)0.0035 (7)−0.0041 (7)
C70.0172 (9)0.0175 (9)0.0162 (8)0.0000 (7)0.0043 (7)−0.0041 (7)
C80.0177 (9)0.0232 (10)0.0150 (8)−0.0038 (7)0.0023 (7)−0.0002 (7)
C90.0190 (9)0.0230 (10)0.0144 (8)−0.0041 (7)0.0037 (7)0.0013 (7)
C100.0171 (9)0.0309 (11)0.0230 (9)0.0009 (8)0.0044 (7)0.0037 (8)
C110.0164 (9)0.0389 (12)0.0312 (11)−0.0071 (9)0.0044 (8)0.0044 (9)
C120.0235 (10)0.0276 (11)0.0316 (11)−0.0108 (8)0.0035 (8)0.0012 (9)
C130.0201 (9)0.0207 (10)0.0247 (10)−0.0018 (8)0.0055 (8)−0.0008 (8)
C140.0177 (9)0.0208 (10)0.0211 (9)−0.0025 (8)0.0039 (7)−0.0011 (8)
C150.0229 (10)0.0295 (11)0.0250 (9)−0.0061 (8)0.0090 (8)0.0001 (8)
C160.0159 (9)0.0172 (9)0.0233 (9)0.0016 (7)0.0046 (7)0.0018 (7)
C170.0182 (9)0.0224 (10)0.0214 (9)0.0024 (8)0.0031 (7)0.0020 (7)
S1—C21.7814 (16)C9—C101.390 (2)
S1—C91.7831 (18)C10—C111.385 (3)
N1—C71.291 (2)C10—H100.9500
N1—C81.403 (2)C11—C121.384 (3)
N2—C71.368 (2)C11—H110.9500
N2—C141.470 (2)C12—C131.383 (2)
N2—C161.472 (2)C12—H120.9500
C1—C61.397 (2)C13—H130.9500
C1—C21.398 (2)C14—C151.526 (2)
C1—C71.502 (2)C14—H14A0.9900
C2—C31.395 (2)C14—H14B0.9900
C3—C41.388 (2)C15—H15A0.9800
C3—H30.9500C15—H15B0.9800
C4—C51.385 (2)C15—H15C0.9800
C4—H40.9500C16—C171.521 (2)
C5—C61.383 (2)C16—H16A0.9900
C5—H50.9500C16—H16B0.9900
C6—H60.9500C17—H17A0.9800
C8—C131.403 (2)C17—H17B0.9800
C8—C91.406 (2)C17—H17C0.9800
C2—S1—C996.16 (8)C9—C10—H10119.9
C7—N1—C8124.28 (14)C12—C11—C10119.53 (17)
C7—N2—C14125.08 (14)C12—C11—H11120.2
C7—N2—C16118.54 (14)C10—C11—H11120.2
C14—N2—C16114.71 (13)C13—C12—C11120.46 (17)
C6—C1—C2118.19 (15)C13—C12—H12119.8
C6—C1—C7120.08 (15)C11—C12—H12119.8
C2—C1—C7121.64 (14)C12—C13—C8121.32 (17)
C3—C2—C1120.48 (15)C12—C13—H13119.3
C3—C2—S1119.67 (13)C8—C13—H13119.3
C1—C2—S1119.79 (13)N2—C14—C15112.82 (14)
C4—C3—C2120.26 (16)N2—C14—H14A109.0
C4—C3—H3119.9C15—C14—H14A109.0
C2—C3—H3119.9N2—C14—H14B109.0
C5—C4—C3119.52 (16)C15—C14—H14B109.0
C5—C4—H4120.2H14A—C14—H14B107.8
C3—C4—H4120.2C14—C15—H15A109.5
C6—C5—C4120.27 (15)C14—C15—H15B109.5
C6—C5—H5119.9H15A—C15—H15B109.5
C4—C5—H5119.9C14—C15—H15C109.5
C5—C6—C1121.19 (16)H15A—C15—H15C109.5
C5—C6—H6119.4H15B—C15—H15C109.5
C1—C6—H6119.4N2—C16—C17113.16 (14)
N1—C7—N2118.19 (15)N2—C16—H16A108.9
N1—C7—C1124.74 (14)C17—C16—H16A108.9
N2—C7—C1116.77 (14)N2—C16—H16B108.9
N1—C8—C13117.10 (16)C17—C16—H16B108.9
N1—C8—C9125.17 (16)H16A—C16—H16B107.8
C13—C8—C9117.30 (15)C16—C17—H17A109.5
C10—C9—C8121.12 (16)C16—C17—H17B109.5
C10—C9—S1119.41 (14)H17A—C17—H17B109.5
C8—C9—S1119.46 (13)C16—C17—H17C109.5
C11—C10—C9120.26 (17)H17A—C17—H17C109.5
C11—C10—H10119.9H17B—C17—H17C109.5
D—H···AD—HH···AD···AD—H···A
C5—H5···N1i0.952.703.576 (2)154
C4—H4···Cgi0.952.813.5759 (18)139
Table 1

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the C8–C12 ring.

D—H⋯A D—HH⋯A DA D—H⋯A
C5—H5⋯N1i 0.952.703.576 (2)154
C4—H4⋯Cg i 0.952.813.5759 (18)139

Symmetry code: (i) .

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