| Literature DB >> 23284435 |
Rajni Kant1, Vivek K Gupta, Kamini Kapoor, Chetan S Shripanavar, Kaushik Banerjee.
Abstract
In the title compound, C(8)H(10)ClN(3)O(2)S, the oxadiazinane ring is in a sofa conformation with the ring O atom deviating from the best plane of the remaining five atoms by 0.636 (2) Å. A short intra-molecular C-S⋯O=C contact [S⋯O 3.122 (2) Å, C-S⋯O 80.0 (2)°] is observed between the two mol-ecular fragments bridged by the methyl-ene group. In the crystal, C-H⋯O hydrogen bonds link mol-ecules, forming chains along the b axis.Entities:
Year: 2012 PMID: 23284435 PMCID: PMC3515215 DOI: 10.1107/S1600536812042031
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H10ClN3O2S | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 11280 reflections |
| θ = 3.5–29.0° | |
| µ = 0.53 mm−1 | |
| Needle, white | |
| 0.3 × 0.2 × 0.2 mm |
| Oxford Diffraction Xcalibur Sapphire3 diffractometer | 2147 independent reflections |
| Radiation source: fine-focus sealed tube | 1974 reflections with |
| Graphite monochromator | |
| Detector resolution: 16.1049 pixels mm-1 | θmax = 26.0°, θmin = 3.5° |
| ω scan | |
| Absorption correction: multi-scan ( | |
| 22323 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 2147 reflections | Δρmax = 0.22 e Å−3 |
| 137 parameters | Δρmin = −0.16 e Å−3 |
| 0 restraints | Absolute structure: Flack (1983), 856 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.04 (9) |
| Experimental. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.29172 (13) | 0.85031 (5) | 0.83926 (3) | 0.04611 (15) | |
| Cl1 | 0.64157 (15) | 0.83860 (6) | 0.96232 (3) | 0.0642 (2) | |
| O1 | 0.4809 (4) | 1.08899 (16) | 0.64448 (10) | 0.0653 (5) | |
| C2 | 0.2262 (7) | 1.1021 (2) | 0.68003 (16) | 0.0668 (8) | |
| H2A | 0.0844 | 1.1412 | 0.6527 | 0.080* | |
| H2B | 0.2630 | 1.1487 | 0.7189 | 0.080* | |
| N3 | 0.1108 (5) | 0.99332 (17) | 0.70052 (10) | 0.0512 (5) | |
| C4 | 0.1836 (6) | 0.8940 (2) | 0.67011 (12) | 0.0516 (6) | |
| N5 | 0.3433 (6) | 0.90503 (19) | 0.61443 (11) | 0.0640 (6) | |
| C6 | 0.4364 (9) | 1.0158 (3) | 0.59173 (14) | 0.0778 (9) | |
| H6A | 0.6149 | 1.0079 | 0.5667 | 0.093* | |
| H6B | 0.2905 | 1.0475 | 0.5624 | 0.093* | |
| C7 | −0.0657 (6) | 0.9905 (3) | 0.76014 (14) | 0.0613 (7) | |
| H7A | −0.2048 | 0.9289 | 0.7564 | 0.074* | |
| H7B | −0.1734 | 1.0613 | 0.7634 | 0.074* | |
| O7 | 0.1066 (5) | 0.80128 (15) | 0.69297 (10) | 0.0744 (6) | |
| C8 | 0.4470 (9) | 0.8075 (3) | 0.57872 (19) | 0.0975 (12) | |
| H8A | 0.3872 | 0.7392 | 0.6012 | 0.146* | |
| H8B | 0.6547 | 0.8098 | 0.5765 | 0.146* | |
| H8C | 0.3684 | 0.8080 | 0.5346 | 0.146* | |
| C9 | 0.1052 (5) | 0.9747 (2) | 0.82176 (12) | 0.0494 (6) | |
| C10 | 0.4123 (5) | 0.9127 (2) | 0.91085 (12) | 0.0484 (6) | |
| N11 | 0.3276 (6) | 1.01443 (19) | 0.92255 (12) | 0.0692 (7) | |
| C12 | 0.1516 (7) | 1.0488 (2) | 0.87096 (15) | 0.0680 (8) | |
| H12 | 0.0683 | 1.1210 | 0.8704 | 0.082* |
| S1 | 0.0529 (3) | 0.0353 (2) | 0.0501 (3) | 0.0000 (2) | 0.0022 (2) | 0.0000 (2) |
| Cl1 | 0.0651 (4) | 0.0728 (4) | 0.0546 (4) | −0.0027 (4) | −0.0063 (3) | 0.0091 (3) |
| O1 | 0.0633 (11) | 0.0579 (11) | 0.0748 (12) | −0.0128 (9) | −0.0003 (10) | 0.0120 (10) |
| C2 | 0.0732 (18) | 0.0395 (12) | 0.088 (2) | 0.0011 (13) | 0.0047 (16) | 0.0129 (13) |
| N3 | 0.0552 (12) | 0.0421 (10) | 0.0563 (12) | −0.0002 (9) | 0.0042 (10) | 0.0105 (9) |
| C4 | 0.0570 (13) | 0.0446 (11) | 0.0533 (14) | −0.0083 (11) | −0.0123 (13) | 0.0084 (11) |
| N5 | 0.0871 (17) | 0.0551 (13) | 0.0499 (12) | −0.0056 (13) | 0.0064 (12) | −0.0020 (10) |
| C6 | 0.102 (3) | 0.079 (2) | 0.0529 (17) | −0.0165 (19) | 0.0084 (16) | 0.0135 (15) |
| C7 | 0.0480 (14) | 0.0691 (16) | 0.0669 (17) | 0.0082 (13) | 0.0019 (12) | 0.0110 (14) |
| O7 | 0.1021 (17) | 0.0435 (9) | 0.0775 (13) | −0.0221 (11) | −0.0017 (13) | 0.0082 (9) |
| C8 | 0.121 (3) | 0.089 (2) | 0.083 (2) | 0.003 (2) | 0.011 (2) | −0.025 (2) |
| C9 | 0.0472 (13) | 0.0450 (12) | 0.0561 (14) | 0.0058 (10) | 0.0112 (11) | 0.0061 (11) |
| C10 | 0.0505 (13) | 0.0459 (13) | 0.0487 (13) | −0.0061 (11) | 0.0058 (11) | 0.0009 (10) |
| N11 | 0.0892 (19) | 0.0501 (12) | 0.0683 (15) | 0.0053 (13) | 0.0002 (14) | −0.0144 (11) |
| C12 | 0.087 (2) | 0.0429 (14) | 0.0741 (19) | 0.0176 (14) | 0.0026 (17) | −0.0061 (12) |
| S1—C10 | 1.710 (2) | N5—C6 | 1.443 (4) |
| S1—C9 | 1.731 (2) | C6—H6A | 0.9700 |
| Cl1—C10 | 1.718 (3) | C6—H6B | 0.9700 |
| O1—C6 | 1.382 (4) | C7—C9 | 1.482 (4) |
| O1—C2 | 1.385 (4) | C7—H7A | 0.9700 |
| C2—N3 | 1.443 (3) | C7—H7B | 0.9700 |
| C2—H2A | 0.9700 | C8—H8A | 0.9600 |
| C2—H2B | 0.9700 | C8—H8B | 0.9600 |
| N3—C4 | 1.359 (3) | C8—H8C | 0.9600 |
| N3—C7 | 1.452 (3) | C9—C12 | 1.336 (4) |
| C4—O7 | 1.233 (3) | C10—N11 | 1.278 (3) |
| C4—N5 | 1.348 (3) | N11—C12 | 1.379 (4) |
| N5—C8 | 1.434 (4) | C12—H12 | 0.9300 |
| C10—S1—C9 | 88.42 (12) | N3—C7—C9 | 113.4 (2) |
| C6—O1—C2 | 109.9 (2) | N3—C7—H7A | 108.9 |
| O1—C2—N3 | 111.3 (2) | C9—C7—H7A | 108.9 |
| O1—C2—H2A | 109.4 | N3—C7—H7B | 108.9 |
| N3—C2—H2A | 109.4 | C9—C7—H7B | 108.9 |
| O1—C2—H2B | 109.4 | H7A—C7—H7B | 107.7 |
| N3—C2—H2B | 109.4 | N5—C8—H8A | 109.5 |
| H2A—C2—H2B | 108.0 | N5—C8—H8B | 109.5 |
| C4—N3—C2 | 122.6 (2) | H8A—C8—H8B | 109.5 |
| C4—N3—C7 | 119.5 (2) | N5—C8—H8C | 109.5 |
| C2—N3—C7 | 117.6 (2) | H8A—C8—H8C | 109.5 |
| O7—C4—N5 | 123.6 (2) | H8B—C8—H8C | 109.5 |
| O7—C4—N3 | 121.1 (2) | C12—C9—C7 | 128.7 (2) |
| N5—C4—N3 | 115.3 (2) | C12—C9—S1 | 108.5 (2) |
| C4—N5—C8 | 121.5 (3) | C7—C9—S1 | 122.7 (2) |
| C4—N5—C6 | 120.9 (2) | N11—C10—S1 | 117.1 (2) |
| C8—N5—C6 | 117.4 (3) | N11—C10—Cl1 | 123.4 (2) |
| O1—C6—N5 | 111.1 (2) | S1—C10—Cl1 | 119.52 (14) |
| O1—C6—H6A | 109.4 | C10—N11—C12 | 108.3 (2) |
| N5—C6—H6A | 109.4 | C9—C12—N11 | 117.6 (2) |
| O1—C6—H6B | 109.4 | C9—C12—H12 | 121.2 |
| N5—C6—H6B | 109.4 | N11—C12—H12 | 121.2 |
| H6A—C6—H6B | 108.0 | ||
| C6—O1—C2—N3 | 54.5 (3) | C4—N3—C7—C9 | 85.9 (3) |
| O1—C2—N3—C4 | −20.9 (4) | C2—N3—C7—C9 | −87.9 (3) |
| O1—C2—N3—C7 | 152.7 (2) | N3—C7—C9—C12 | 111.4 (3) |
| C2—N3—C4—O7 | 172.1 (3) | N3—C7—C9—S1 | −66.6 (3) |
| C7—N3—C4—O7 | −1.3 (4) | C10—S1—C9—C12 | −0.2 (2) |
| C2—N3—C4—N5 | −7.7 (4) | C10—S1—C9—C7 | 178.1 (2) |
| C7—N3—C4—N5 | 178.8 (2) | C9—S1—C10—N11 | 0.3 (2) |
| O7—C4—N5—C8 | −2.7 (5) | C9—S1—C10—Cl1 | −178.75 (16) |
| N3—C4—N5—C8 | 177.2 (3) | S1—C10—N11—C12 | −0.2 (3) |
| O7—C4—N5—C6 | −177.5 (3) | Cl1—C10—N11—C12 | 178.8 (2) |
| N3—C4—N5—C6 | 2.4 (4) | C7—C9—C12—N11 | −178.0 (3) |
| C2—O1—C6—N5 | −59.9 (4) | S1—C9—C12—N11 | 0.2 (4) |
| C4—N5—C6—O1 | 31.4 (4) | C10—N11—C12—C9 | 0.0 (4) |
| C8—N5—C6—O1 | −143.6 (3) |
| H··· | ||||
| C12—H12···O7i | 0.93 | 2.60 | 3.443 (3) | 151 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C12—H12⋯O7i | 0.93 | 2.60 | 3.443 (3) | 151 |
Symmetry code: (i) .