Literature DB >> 23284393

catena-Poly[[diaqua-bis-[2-(3-oxo-1,3-di-hydro-2-benzofuran-1-yl)acetato-κO]cobalt(II)]-μ-1,2-bis-(pyridin-4-yl)ethane-κ(2)N:N'].

Changyan Sun1, Yang Li, Wenjun Li, Bin Dong.   

Abstract

In the title complex, [Co(C(10)H(7)O(4))(2)(C(12)H(12)N(2))(H(2)O)(2)](n), the Co(II) ion is located on a crystallographic centre of symmetry and is six-coordinated by two N atoms from two 1,2-bis-(4-pyrid-yl)ethane ligands, two carboxylate O atoms from two 1,3-dihydro-3-oxo-1-isobenzofuran-acetate ligands and two terminal water ligands. The 1,2-bis(4-pyrid-yl)ethane ligands act as bidentate ligands, and bridge the Co(II) ions into infinite chains extending parallel to [010]. In these chains, there are intra-mol-ecular O-H⋯O hydrogen bonding between the coordination water mol-ecules and carboxyl-ate groups. Inter-mol-ecular O-H⋯O hydrogen bonding between the adjacent chains and π⋯π stacking inter-actions result in the formation of a three-dimensional supra-molecular network.

Entities:  

Year:  2012        PMID: 23284393      PMCID: PMC3515166          DOI: 10.1107/S1600536812044339

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For in situ ligand reactions, see: Zhang et al. (2005 ▶); Chen et al. (2007 ▶); Zhao et al. (2008 ▶).

Experimental

Crystal data

[Co(C10H7O4)2(C12H12N2)(H2O)2] M = 661.51 Triclinic, a = 5.4599 (12) Å b = 10.374 (2) Å c = 13.617 (3) Å α = 93.912 (4)° β = 99.409 (4)° γ = 97.651 (4)° V = 750.9 (3) Å3 Z = 1 Mo Kα radiation μ = 0.63 mm−1 T = 293 K 0.20 × 0.18 × 0.10 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1997 ▶) T min = 0.749, T max = 1.000 4258 measured reflections 3027 independent reflections 2306 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.055 wR(F 2) = 0.133 S = 1.05 3027 reflections 213 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.73 e Å−3 Δρmin = −0.61 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812044339/hg5263sup1.cif Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812044339/hg5263Isup2.cdx Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812044339/hg5263Isup3.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(C10H7O4)2(C12H12N2)(H2O)2]Z = 1
Mr = 661.51F(000) = 343
Triclinic, P1Dx = 1.463 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 5.4599 (12) ÅCell parameters from 1338 reflections
b = 10.374 (2) Åθ = 1.5–26.4°
c = 13.617 (3) ŵ = 0.63 mm1
α = 93.912 (4)°T = 293 K
β = 99.409 (4)°Block, red
γ = 97.651 (4)°0.20 × 0.18 × 0.10 mm
V = 750.9 (3) Å3
Bruker SMART CCD area-detector diffractometer3027 independent reflections
Radiation source: fine-focus sealed tube2306 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.026
phi and ω scansθmax = 26.4°, θmin = 1.5°
Absorption correction: multi-scan (SADABS; Bruker, 1997)h = −4→6
Tmin = 0.749, Tmax = 1.000k = −12→12
4258 measured reflectionsl = −16→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.055Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.133H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.051P)2 + 0.6286P] where P = (Fo2 + 2Fc2)/3
3027 reflections(Δ/σ)max < 0.001
213 parametersΔρmax = 0.73 e Å3
0 restraintsΔρmin = −0.61 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co10.50000.50000.50000.0231 (2)
N10.5225 (5)0.4729 (3)0.34064 (18)0.0312 (7)
O10.6967 (4)0.3420 (2)0.52914 (16)0.0326 (6)
O20.3880 (5)0.1819 (3)0.5357 (3)0.0613 (9)
O30.7376 (7)0.1884 (4)0.7644 (2)0.0817 (12)
O40.9063 (9)0.2427 (5)0.9246 (3)0.1123 (17)
C10.6125 (7)0.2293 (4)0.5499 (3)0.0358 (9)
C20.8056 (8)0.1465 (4)0.5951 (3)0.0498 (11)
H2A0.81870.07780.54510.060*
H2B0.96800.20090.61240.060*
C30.7443 (8)0.0860 (5)0.6858 (3)0.0566 (12)
H30.58150.02960.66960.068*
C40.9426 (8)0.0100 (5)0.7330 (3)0.0523 (11)
C51.0204 (9)0.0604 (5)0.8312 (3)0.0574 (12)
C61.1928 (11)0.0029 (6)0.8936 (4)0.0823 (17)
H61.24030.03350.96070.099*
C71.2914 (11)−0.0991 (6)0.8550 (4)0.0839 (18)
H71.4078−0.13820.89610.101*
C81.2209 (10)−0.1446 (5)0.7563 (4)0.0710 (15)
H81.2932−0.21310.73110.085*
C91.0467 (9)−0.0916 (5)0.6938 (4)0.0640 (13)
H90.9998−0.12310.62680.077*
C100.8928 (11)0.1723 (6)0.8499 (4)0.0753 (16)
C110.7230 (7)0.5193 (4)0.3025 (3)0.0454 (10)
H110.86500.56010.34640.054*
C120.7320 (8)0.5102 (5)0.2011 (3)0.0532 (11)
H120.87630.54540.17870.064*
C130.5273 (8)0.4491 (4)0.1340 (2)0.0453 (10)
C140.3274 (8)0.3949 (5)0.1727 (3)0.0607 (13)
H140.18840.34800.13050.073*
C150.3302 (8)0.4094 (5)0.2746 (3)0.0542 (12)
H150.18920.37250.29840.065*
C160.5295 (10)0.4387 (5)0.0226 (3)0.0609 (13)
H16A0.69350.42200.01090.073*
H16B0.40680.3655−0.00980.073*
O50.1581 (5)0.3715 (3)0.47022 (17)0.0317 (6)
H5A0.026 (8)0.368 (4)0.482 (3)0.049 (13)*
H5B0.216 (8)0.299 (5)0.491 (3)0.057 (14)*
U11U22U33U12U13U23
Co10.0194 (3)0.0328 (4)0.0189 (3)0.0042 (3)0.0066 (2)0.0067 (3)
N10.0312 (15)0.045 (2)0.0198 (13)0.0076 (13)0.0064 (11)0.0088 (13)
O10.0244 (12)0.0404 (17)0.0372 (13)0.0099 (11)0.0096 (10)0.0136 (11)
O20.0341 (16)0.046 (2)0.108 (3)0.0054 (13)0.0149 (16)0.0305 (18)
O30.104 (3)0.095 (3)0.064 (2)0.061 (2)0.026 (2)0.017 (2)
O40.165 (4)0.123 (4)0.063 (2)0.060 (3)0.036 (3)−0.007 (2)
C10.033 (2)0.042 (2)0.0386 (19)0.0136 (17)0.0135 (15)0.0137 (17)
C20.049 (2)0.052 (3)0.057 (2)0.021 (2)0.0152 (19)0.024 (2)
C30.051 (3)0.056 (3)0.066 (3)0.008 (2)0.010 (2)0.026 (2)
C40.056 (3)0.050 (3)0.051 (2)0.012 (2)0.002 (2)0.017 (2)
C50.063 (3)0.060 (3)0.050 (2)0.012 (2)0.007 (2)0.015 (2)
C60.100 (4)0.089 (5)0.052 (3)0.021 (4)−0.016 (3)0.019 (3)
C70.092 (4)0.073 (4)0.083 (4)0.033 (3)−0.022 (3)0.025 (3)
C80.073 (3)0.050 (3)0.088 (4)0.022 (3)−0.006 (3)0.015 (3)
C90.082 (3)0.045 (3)0.062 (3)0.022 (3)−0.009 (2)0.003 (2)
C100.098 (4)0.083 (4)0.056 (3)0.036 (3)0.023 (3)0.016 (3)
C110.047 (2)0.059 (3)0.0278 (18)−0.0039 (19)0.0091 (16)0.0049 (18)
C120.061 (3)0.067 (3)0.035 (2)0.001 (2)0.023 (2)0.010 (2)
C130.069 (3)0.052 (3)0.0201 (17)0.019 (2)0.0123 (18)0.0091 (17)
C140.053 (3)0.097 (4)0.0250 (19)0.000 (2)−0.0016 (18)−0.007 (2)
C150.043 (2)0.088 (4)0.0270 (18)−0.009 (2)0.0090 (17)0.002 (2)
C160.095 (4)0.071 (4)0.0237 (19)0.033 (3)0.014 (2)0.0065 (19)
O50.0219 (13)0.0407 (17)0.0342 (13)0.0022 (11)0.0096 (10)0.0082 (11)
Co1—O12.101 (2)C5—C101.461 (7)
Co1—O1i2.101 (2)C6—C71.362 (7)
Co1—O5i2.108 (3)C6—H60.9300
Co1—O52.108 (3)C7—C81.369 (7)
Co1—N1i2.195 (2)C7—H70.9300
Co1—N12.195 (2)C8—C91.368 (6)
N1—C151.331 (5)C8—H80.9300
N1—C111.334 (5)C9—H90.9300
O1—C11.266 (4)C11—C121.386 (5)
O2—C11.238 (4)C11—H110.9300
O3—C101.357 (6)C12—C131.373 (6)
O3—C31.464 (6)C12—H120.9300
O4—C101.197 (6)C13—C141.360 (6)
C1—C21.526 (5)C13—C161.515 (5)
C2—C31.488 (5)C14—C151.383 (5)
C2—H2A0.9700C14—H140.9300
C2—H2B0.9700C15—H150.9300
C3—C41.509 (6)C16—C16ii1.501 (9)
C3—H30.9800C16—H16A0.9700
C4—C91.379 (6)C16—H16B0.9700
C4—C51.379 (6)O5—H5A0.76 (4)
C5—C61.386 (6)O5—H5B0.90 (5)
O1—Co1—O1i180.000 (1)C6—C5—C10131.1 (5)
O1—Co1—O5i89.80 (10)C7—C6—C5118.9 (5)
O1i—Co1—O5i90.20 (10)C7—C6—H6120.5
O1—Co1—O590.20 (10)C5—C6—H6120.5
O1i—Co1—O589.80 (10)C6—C7—C8120.6 (4)
O5i—Co1—O5180.00 (14)C6—C7—H7119.7
O1—Co1—N1i89.22 (9)C8—C7—H7119.7
O1i—Co1—N1i90.78 (9)C9—C8—C7121.6 (5)
O5i—Co1—N1i88.53 (10)C9—C8—H8119.2
O5—Co1—N1i91.47 (10)C7—C8—H8119.2
O1—Co1—N190.78 (9)C8—C9—C4118.0 (4)
O1i—Co1—N189.22 (9)C8—C9—H9121.0
O5i—Co1—N191.47 (10)C4—C9—H9121.0
O5—Co1—N188.53 (10)O4—C10—O3121.3 (5)
N1i—Co1—N1180.000 (1)O4—C10—C5130.3 (5)
C15—N1—C11115.3 (3)O3—C10—C5108.4 (4)
C15—N1—Co1121.1 (2)N1—C11—C12123.8 (4)
C11—N1—Co1123.6 (2)N1—C11—H11118.1
C1—O1—Co1128.2 (2)C12—C11—H11118.1
C10—O3—C3110.7 (4)C13—C12—C11119.8 (4)
O2—C1—O1125.1 (3)C13—C12—H12120.1
O2—C1—C2118.2 (4)C11—C12—H12120.1
O1—C1—C2116.7 (3)C14—C13—C12116.7 (3)
C3—C2—C1113.8 (3)C14—C13—C16122.0 (4)
C3—C2—H2A108.8C12—C13—C16121.3 (4)
C1—C2—H2A108.8C13—C14—C15120.3 (4)
C3—C2—H2B108.8C13—C14—H14119.9
C1—C2—H2B108.8C15—C14—H14119.9
H2A—C2—H2B107.7N1—C15—C14124.0 (4)
O3—C3—C2109.7 (4)N1—C15—H15118.0
O3—C3—C4103.6 (3)C14—C15—H15118.0
C2—C3—C4113.4 (4)C16ii—C16—C13111.5 (4)
O3—C3—H3110.0C16ii—C16—H16A109.3
C2—C3—H3110.0C13—C16—H16A109.3
C4—C3—H3110.0C16ii—C16—H16B109.3
C9—C4—C5120.9 (4)C13—C16—H16B109.3
C9—C4—C3131.1 (4)H16A—C16—H16B108.0
C5—C4—C3108.0 (4)Co1—O5—H5A138 (3)
C4—C5—C6119.9 (5)Co1—O5—H5B99 (3)
C4—C5—C10109.0 (4)H5A—O5—H5B106 (4)
O1—Co1—N1—C1599.1 (3)C3—C4—C5—C10−3.4 (6)
O1i—Co1—N1—C15−80.9 (3)C4—C5—C6—C73.1 (9)
O5i—Co1—N1—C15−171.1 (3)C10—C5—C6—C7−177.3 (6)
O5—Co1—N1—C158.9 (3)C5—C6—C7—C8−0.2 (10)
O1—Co1—N1—C11−82.1 (3)C6—C7—C8—C9−1.4 (10)
O1i—Co1—N1—C1197.9 (3)C7—C8—C9—C40.0 (8)
O5i—Co1—N1—C117.7 (3)C5—C4—C9—C82.9 (8)
O5—Co1—N1—C11−172.3 (3)C3—C4—C9—C8−178.1 (5)
O5i—Co1—O1—C1161.1 (3)C3—O3—C10—O4−176.7 (6)
O5—Co1—O1—C1−18.9 (3)C3—O3—C10—C52.4 (6)
N1i—Co1—O1—C172.6 (3)C4—C5—C10—O4179.7 (7)
N1—Co1—O1—C1−107.4 (3)C6—C5—C10—O40.1 (11)
Co1—O1—C1—O216.8 (5)C4—C5—C10—O30.7 (6)
Co1—O1—C1—C2−163.8 (2)C6—C5—C10—O3−178.9 (5)
O2—C1—C2—C3−48.9 (6)C15—N1—C11—C123.5 (6)
O1—C1—C2—C3131.7 (4)Co1—N1—C11—C12−175.4 (3)
C10—O3—C3—C2−125.7 (4)N1—C11—C12—C13−0.9 (7)
C10—O3—C3—C4−4.3 (5)C11—C12—C13—C14−2.9 (7)
C1—C2—C3—O3−61.7 (5)C11—C12—C13—C16179.3 (4)
C1—C2—C3—C4−177.1 (4)C12—C13—C14—C153.8 (7)
O3—C3—C4—C9−174.5 (5)C16—C13—C14—C15−178.4 (4)
C2—C3—C4—C9−55.6 (7)C11—N1—C15—C14−2.5 (7)
O3—C3—C4—C54.6 (5)Co1—N1—C15—C14176.4 (4)
C2—C3—C4—C5123.5 (5)C13—C14—C15—N1−1.2 (8)
C9—C4—C5—C6−4.5 (8)C14—C13—C16—C16ii100.1 (7)
C3—C4—C5—C6176.3 (5)C12—C13—C16—C16ii−82.3 (7)
C9—C4—C5—C10175.8 (5)
D—H···AD—HH···AD···AD—H···A
O5—H5B···O20.90 (5)1.72 (5)2.603 (4)168 (4)
O5—H5B···O10.90 (5)2.57 (4)2.981 (3)109 (3)
O5—H5A···O1iii0.76 (4)1.99 (4)2.752 (3)172 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O5—H5B⋯O20.90 (5)1.72 (5)2.603 (4)168 (4)
O5—H5B⋯O10.90 (5)2.57 (4)2.981 (3)109 (3)
O5—H5A⋯O1i 0.76 (4)1.99 (4)2.752 (3)172 (4)

Symmetry code: (i) .

  3 in total

1.  Solvothermal in situ metal/ligand reactions: a new bridge between coordination chemistry and organic synthetic chemistry.

Authors:  Xiao-Ming Chen; Ming-Liang Tong
Journal:  Acc Chem Res       Date:  2007-02       Impact factor: 22.384

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 3.  In situ hydrothermal synthesis of tetrazole coordination polymers with interesting physical properties.

Authors:  Hong Zhao; Zhi-Rong Qu; Heng-Yun Ye; Ren-Gen Xiong
Journal:  Chem Soc Rev       Date:  2007-10-01       Impact factor: 54.564

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.