Literature DB >> 23284373

Hexa-kis-(μ(3)-1-methyl-thio-urea-κ(3)S:S:S)hexa-kis-[iodidocopper(I)].

Saeed Ahmad1, Muhammad Mufakkar, Islam Ullah Khan, Hoong-Kun Fun, Abdul Waheed.   

Abstract

The title compound, [Cu(6)I(6)(C(2)H(6)N(2)S)(6)], was obtained from the reaction of copper(I) iodide with N-methyl-thio-urea (Metu) in equimolar amounts in acetonitile. The complex consists of two six-membered trinuclear Cu(3)S(3)I(3) cores that combine through triply bridging Metu, forming a hexa-nuclear core which has -3 symmetry. The Cu(II) atom is coordinated by three S atoms of Metu and one iodide ion in a distorted tetra-hedral geometry. The crystal structure is stabilized by N-H⋯I hydrogen bonds and cuprophilic inter-actions [CuCu = 3.0264 (9) Å].

Entities:  

Year:  2012        PMID: 23284373      PMCID: PMC3515146          DOI: 10.1107/S1600536812043437

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For crystal structures of copper(I) complexes of thio­urea-type ligands, see: Ahmad et al. (2010 ▶); Bowmaker et al. (2009 ▶); Li et al. (2005 ▶); Lobana et al. (2003 ▶, 2005 ▶); Khan et al. (2007 ▶); Mufakkar et al. (2007 ▶, 2009 ▶, 2011 ▶); Stocker et al. (1997 ▶); Zoufala et al. (2007 ▶). For van der Waals radii and cuprophilic inter­actions, see: Siemeling et al. (1997 ▶); Singh et al. (1997 ▶).

Experimental

Crystal data

[Cu6I6(C2H6N2S)6] M = 1683.65 Trigonal, a = 21.7517 (1) Å c = 7.6269 (1) Å V = 3125.11 (5) Å3 Z = 3 Mo Kα radiation μ = 7.79 mm−1 T = 296 K 0.28 × 0.15 × 0.14 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.179, T max = 0.338 14898 measured reflections 1995 independent reflections 1649 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.061 S = 1.06 1995 reflections 65 parameters H-atom parameters constrained Δρmax = 1.32 e Å−3 Δρmin = −1.64 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812043437/rz5016sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812043437/rz5016Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu6I6(C2H6N2S)6]Dx = 2.684 Mg m3
Mr = 1683.65Mo Kα radiation, λ = 0.71073 Å
Trigonal, R3Cell parameters from 4617 reflections
Hall symbol: -R 3θ = 2.2–26.6°
a = 21.7517 (1) ŵ = 7.79 mm1
c = 7.6269 (1) ÅT = 296 K
V = 3125.11 (5) Å3Block, colourless
Z = 30.28 × 0.15 × 0.14 mm
F(000) = 2340
Bruker SMART APEXII CCD area-detector diffractometer1995 independent reflections
Radiation source: fine-focus sealed tube1649 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.035
φ and ω scansθmax = 29.8°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −30→30
Tmin = 0.179, Tmax = 0.338k = −30→30
14898 measured reflectionsl = −10→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.027Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.061H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0202P)2 + 17.0381P] where P = (Fo2 + 2Fc2)/3
1995 reflections(Δ/σ)max < 0.001
65 parametersΔρmax = 1.32 e Å3
0 restraintsΔρmin = −1.64 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
I10.082885 (13)0.829523 (13)0.17796 (4)0.04164 (9)
Cu10.04125 (3)0.91805 (3)0.12398 (9)0.05416 (16)
N1−0.10312 (17)0.76485 (17)0.3103 (5)0.0478 (8)
H1N1−0.12640.72320.34550.057*
H2N1−0.06160.78050.29090.057*
N2−0.19615 (15)0.78569 (16)0.2972 (4)0.0394 (7)
H1N2−0.20670.81510.27210.047*
C1−0.12810 (18)0.80754 (17)0.2777 (5)0.0330 (7)
C2−0.2500 (2)0.7132 (2)0.3356 (6)0.0489 (10)
H2A−0.29450.71110.35730.073*
H2B−0.23630.69700.43750.073*
H2C−0.25490.68340.23750.073*
S1−0.07031 (4)0.89448 (4)0.21477 (14)0.0388 (2)
U11U22U33U12U13U23
I10.04018 (14)0.03935 (13)0.05508 (16)0.02713 (11)0.00274 (11)0.00505 (11)
Cu10.0380 (3)0.0348 (2)0.0945 (4)0.0218 (2)−0.0005 (3)0.0007 (3)
N10.0340 (16)0.0398 (17)0.071 (2)0.0197 (14)0.0127 (16)0.0209 (17)
N20.0316 (14)0.0353 (15)0.0534 (19)0.0182 (13)0.0053 (13)0.0115 (14)
C10.0318 (16)0.0306 (16)0.0369 (17)0.0157 (13)0.0033 (14)0.0031 (13)
C20.0305 (17)0.042 (2)0.063 (3)0.0101 (16)0.0039 (18)0.0181 (19)
S10.0266 (4)0.0264 (4)0.0635 (6)0.0133 (3)0.0024 (4)0.0039 (4)
I1—Cu12.5379 (5)N2—C11.317 (4)
Cu1—S1i2.3164 (10)N2—C21.449 (5)
Cu1—S12.3210 (10)N2—H1N20.8028
Cu1—S1ii2.6057 (13)C1—S11.735 (3)
Cu1—Cu1iii3.0264 (9)C2—H2A0.9600
Cu1—Cu1ii3.0264 (9)C2—H2B0.9600
N1—C11.313 (4)C2—H2C0.9600
N1—H1N10.8316S1—Cu1iv2.3164 (10)
N1—H2N10.8039S1—Cu1iii2.6057 (13)
S1i—Cu1—S198.22 (5)C1—N2—C2124.5 (3)
S1i—Cu1—I1122.56 (3)C1—N2—H1N2113.8
S1—Cu1—I1120.95 (3)C2—N2—H1N2121.2
S1i—Cu1—S1ii102.80 (4)N1—C1—N2120.7 (3)
S1—Cu1—S1ii102.67 (4)N1—C1—S1119.5 (3)
I1—Cu1—S1ii106.80 (3)N2—C1—S1119.7 (3)
S1i—Cu1—Cu1iii118.09 (3)N2—C2—H2A109.5
S1—Cu1—Cu1iii56.49 (3)N2—C2—H2B109.5
I1—Cu1—Cu1iii118.39 (2)H2A—C2—H2B109.5
S1ii—Cu1—Cu1iii47.86 (3)N2—C2—H2C109.5
S1i—Cu1—Cu1ii56.52 (3)H2A—C2—H2C109.5
S1—Cu1—Cu1ii118.03 (3)H2B—C2—H2C109.5
I1—Cu1—Cu1ii119.84 (2)C1—S1—Cu1iv115.65 (12)
S1ii—Cu1—Cu1ii47.96 (3)C1—S1—Cu1115.53 (12)
Cu1iii—Cu1—Cu1ii85.08 (3)Cu1iv—S1—Cu1123.88 (5)
C1—N1—H1N1126.2C1—S1—Cu1iii98.60 (12)
C1—N1—H2N1116.1Cu1iv—S1—Cu1iii75.63 (3)
H1N1—N1—H2N1117.6Cu1—S1—Cu1iii75.55 (3)
C2—N2—C1—N1−7.1 (6)Cu1iii—Cu1—S1—C192.76 (14)
C2—N2—C1—S1174.9 (3)Cu1ii—Cu1—S1—C1154.78 (14)
N1—C1—S1—Cu1iv171.7 (3)S1i—Cu1—S1—Cu1iv57.15 (8)
N2—C1—S1—Cu1iv−10.3 (4)I1—Cu1—S1—Cu1iv−166.73 (4)
N1—C1—S1—Cu115.6 (4)S1ii—Cu1—S1—Cu1iv−48.03 (7)
N2—C1—S1—Cu1−166.4 (3)Cu1iii—Cu1—S1—Cu1iv−61.20 (5)
N1—C1—S1—Cu1iii93.6 (3)Cu1ii—Cu1—S1—Cu1iv0.83 (8)
N2—C1—S1—Cu1iii−88.4 (3)S1i—Cu1—S1—Cu1iii118.35 (4)
S1i—Cu1—S1—C1−148.90 (13)I1—Cu1—S1—Cu1iii−105.53 (3)
I1—Cu1—S1—C1−12.78 (15)S1ii—Cu1—S1—Cu1iii13.17 (4)
S1ii—Cu1—S1—C1105.92 (14)Cu1ii—Cu1—S1—Cu1iii62.03 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1N1···I1v0.832.953.744 (3)161
N1—H2N1···I10.802.903.698 (4)173
N2—H1N2···I1iv0.802.953.756 (3)177
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1N1⋯I1i 0.832.953.744 (3)161
N1—H2N1⋯I10.802.903.698 (4)173
N2—H1N2⋯I1ii 0.802.953.756 (3)177

Symmetry codes: (i) ; (ii) .

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