| Literature DB >> 23284369 |
Jing Jing Guo1, Wei Wang, Yi Dong Zhang, Li Yang, Shu Hua Zhang.
Abstract
The title complex, [Co(C(10)H(9)N(4)O(2)S)(2)(C(3)H(7)NO)(2)], lies across an inversion center. The Co(II) atom is coordinated in a slightly distorted octa-hedral geometry by four N atoms from two bidentate 4-amino-N-(pyrimidin-2-yl)benzene-sulfonamidate (sulfadiazine) anions and two O atoms from two dimethyl-formamide (DMF) ligands. The dihedral angle between the benzene and pyrimidine rings is 82.37 (13)°. A three-dimensional network is generated by N-H⋯O hydrogen bonds between the amino groups and of the sulfonamidate O atoms of neighbouring mol-ecules. The DMF ligand is disordered over two sets of sites in a 0.559 (4):0.441 (4) ratio.Entities:
Year: 2012 PMID: 23284369 PMCID: PMC3515142 DOI: 10.1107/S160053681204336X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C10H9N4O2S)2(C3H7NO)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 4388 reflections |
| θ = 3.0–28.7° | |
| µ = 0.72 mm−1 | |
| β = 102.147 (6)° | Block, red |
| 0.28 × 0.25 × 0.20 mm | |
| Bruker SMART CCD diffractometer | 3495 independent reflections |
| Radiation source: fine-focus sealed tube | 2989 reflections with |
| Graphite monochromator | |
| Detector resolution: 0 pixels mm-1 | θmax = 27.0°, θmin = 3.0° |
| phi and ω scans | |
| Absorption correction: multi-scan ( | |
| 13220 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 3495 reflections | Δρmax = 0.33 e Å−3 |
| 222 parameters | Δρmin = −0.35 e Å−3 |
| 36 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0012 (1) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| C1 | 0.4095 (3) | 0.9002 (2) | 0.13724 (16) | 0.0476 (6) | |
| H1A | 0.4447 | 0.9344 | 0.0935 | 0.057* | |
| C2 | 0.3251 (2) | 0.7957 (2) | 0.12498 (14) | 0.0363 (5) | |
| C3 | 0.2761 (3) | 0.7454 (3) | 0.19139 (15) | 0.0507 (6) | |
| H3A | 0.2212 | 0.6742 | 0.1843 | 0.061* | |
| C4 | 0.3079 (3) | 0.7994 (3) | 0.26800 (16) | 0.0572 (7) | |
| H4A | 0.2744 | 0.7640 | 0.3119 | 0.069* | |
| C5 | 0.3892 (3) | 0.9061 (3) | 0.28047 (16) | 0.0508 (7) | |
| C6 | 0.4421 (3) | 0.9543 (3) | 0.21390 (17) | 0.0568 (7) | |
| H6A | 0.5002 | 1.0240 | 0.2213 | 0.068* | |
| C7 | −0.0153 (2) | 0.73277 (19) | 0.00525 (13) | 0.0319 (5) | |
| C8 | −0.1683 (3) | 0.8945 (2) | −0.00174 (16) | 0.0438 (6) | |
| H8A | −0.1808 | 0.9767 | 0.0005 | 0.053* | |
| C9 | −0.2982 (3) | 0.8242 (2) | −0.01745 (18) | 0.0513 (7) | |
| H9A | −0.3961 | 0.8573 | −0.0260 | 0.062* | |
| C10 | −0.2766 (3) | 0.7031 (2) | −0.01992 (17) | 0.0497 (6) | |
| H10A | −0.3616 | 0.6528 | −0.0293 | 0.060* | |
| Co1 | 0.0000 | 0.5000 | 0.0000 | 0.03466 (14) | |
| N1 | −0.1368 (2) | 0.65637 (17) | −0.00916 (13) | 0.0402 (5) | |
| N2 | 0.1174 (2) | 0.66834 (16) | 0.01562 (12) | 0.0350 (4) | |
| N3 | −0.0252 (2) | 0.85105 (17) | 0.01044 (12) | 0.0372 (4) | |
| N4 | 0.4124 (3) | 0.9634 (3) | 0.35511 (15) | 0.0724 (8) | |
| H4B | 0.3765 | 0.9335 | 0.3950 | 0.087* | |
| H4C | 0.4629 | 1.0294 | 0.3621 | 0.087* | |
| O2 | 0.29575 (19) | 0.81638 (15) | −0.03312 (10) | 0.0437 (4) | |
| O3 | 0.38724 (19) | 0.62601 (16) | 0.02969 (12) | 0.0519 (5) | |
| S1 | 0.28414 (6) | 0.72636 (5) | 0.02742 (3) | 0.03470 (15) | |
| O1 | 0.0274 (19) | 0.4809 (16) | 0.1263 (12) | 0.053 (2) | 0.559 (4) |
| C11 | −0.0332 (9) | 0.5365 (7) | 0.1739 (6) | 0.0563 (17) | 0.559 (4) |
| H11A | −0.1225 | 0.5630 | 0.1388 | 0.084* | 0.559 (4) |
| C13 | −0.1386 (10) | 0.6711 (8) | 0.2810 (5) | 0.107 (2) | 0.559 (4) |
| H13A | −0.1134 | 0.6764 | 0.3402 | 0.160* | 0.559 (4) |
| H13B | −0.1218 | 0.7471 | 0.2577 | 0.160* | 0.559 (4) |
| H13C | −0.2446 | 0.6489 | 0.2632 | 0.160* | 0.559 (4) |
| C12 | 0.0603 (12) | 0.5055 (8) | 0.3034 (5) | 0.098 (2) | 0.559 (4) |
| H12A | 0.1286 | 0.4397 | 0.3204 | 0.147* | 0.559 (4) |
| H12B | 0.1008 | 0.5758 | 0.3334 | 0.147* | 0.559 (4) |
| H12C | −0.0388 | 0.4876 | 0.3145 | 0.147* | 0.559 (4) |
| N5 | −0.0499 (7) | 0.5829 (5) | 0.2463 (3) | 0.0665 (13) | 0.559 (4) |
| O1' | −0.009 (3) | 0.501 (2) | 0.1318 (16) | 0.053 (2) | 0.441 (4) |
| C11' | −0.0812 (12) | 0.5748 (10) | 0.1647 (7) | 0.0563 (17) | 0.441 (4) |
| H11B | −0.1748 | 0.6128 | 0.1375 | 0.084* | 0.441 (4) |
| C13' | 0.1448 (14) | 0.4546 (11) | 0.2886 (6) | 0.107 (2) | 0.441 (4) |
| H13D | 0.1783 | 0.4035 | 0.2493 | 0.160* | 0.441 (4) |
| H13E | 0.2274 | 0.5065 | 0.3134 | 0.160* | 0.441 (4) |
| H13F | 0.1146 | 0.4068 | 0.3306 | 0.160* | 0.441 (4) |
| C12' | −0.0588 (13) | 0.5888 (10) | 0.3139 (5) | 0.098 (2) | 0.441 (4) |
| H12D | −0.0379 | 0.5933 | 0.3731 | 0.147* | 0.441 (4) |
| H12E | −0.0382 | 0.6648 | 0.2916 | 0.147* | 0.441 (4) |
| H12F | −0.1647 | 0.5681 | 0.2937 | 0.147* | 0.441 (4) |
| N5' | 0.0174 (10) | 0.5244 (7) | 0.2573 (5) | 0.0665 (13) | 0.441 (4) |
| C1 | 0.0493 (14) | 0.0501 (15) | 0.0422 (13) | −0.0135 (12) | 0.0066 (11) | 0.0020 (12) |
| C2 | 0.0331 (11) | 0.0383 (12) | 0.0342 (11) | −0.0024 (9) | −0.0004 (9) | 0.0011 (10) |
| C3 | 0.0565 (15) | 0.0515 (16) | 0.0409 (13) | −0.0211 (13) | 0.0031 (11) | 0.0010 (12) |
| C4 | 0.0653 (17) | 0.0698 (19) | 0.0340 (13) | −0.0220 (15) | 0.0047 (12) | 0.0016 (13) |
| C5 | 0.0473 (14) | 0.0605 (17) | 0.0386 (13) | −0.0069 (12) | −0.0049 (11) | −0.0041 (12) |
| C6 | 0.0605 (17) | 0.0523 (16) | 0.0527 (16) | −0.0222 (14) | 0.0006 (13) | −0.0068 (13) |
| C7 | 0.0351 (11) | 0.0280 (11) | 0.0313 (11) | −0.0031 (9) | 0.0038 (9) | −0.0032 (9) |
| C8 | 0.0448 (13) | 0.0333 (12) | 0.0533 (15) | 0.0049 (10) | 0.0103 (11) | −0.0007 (11) |
| C9 | 0.0366 (12) | 0.0485 (15) | 0.0697 (18) | 0.0047 (11) | 0.0130 (12) | 0.0027 (13) |
| C10 | 0.0359 (13) | 0.0469 (15) | 0.0657 (17) | −0.0097 (11) | 0.0095 (12) | −0.0025 (13) |
| Co1 | 0.0448 (3) | 0.0246 (2) | 0.0328 (2) | −0.00372 (17) | 0.00405 (18) | −0.00398 (17) |
| N1 | 0.0384 (10) | 0.0322 (10) | 0.0489 (12) | −0.0077 (8) | 0.0066 (9) | −0.0043 (9) |
| N2 | 0.0353 (9) | 0.0254 (9) | 0.0416 (10) | −0.0006 (7) | 0.0021 (8) | −0.0041 (8) |
| N3 | 0.0375 (10) | 0.0269 (9) | 0.0457 (11) | −0.0010 (8) | 0.0056 (8) | −0.0031 (8) |
| N4 | 0.0836 (18) | 0.0854 (19) | 0.0428 (13) | −0.0255 (16) | 0.0012 (13) | −0.0148 (13) |
| O2 | 0.0474 (9) | 0.0473 (10) | 0.0369 (9) | −0.0027 (8) | 0.0099 (7) | 0.0049 (8) |
| O3 | 0.0441 (9) | 0.0492 (11) | 0.0617 (11) | 0.0162 (8) | 0.0092 (8) | −0.0004 (9) |
| S1 | 0.0324 (3) | 0.0339 (3) | 0.0365 (3) | 0.0030 (2) | 0.0044 (2) | 0.0001 (2) |
| O1 | 0.078 (7) | 0.052 (5) | 0.033 (2) | −0.005 (4) | 0.020 (4) | −0.008 (3) |
| C11 | 0.062 (4) | 0.067 (4) | 0.041 (2) | −0.019 (3) | 0.014 (3) | −0.008 (3) |
| C13 | 0.140 (5) | 0.126 (5) | 0.068 (3) | 0.001 (4) | 0.051 (3) | 0.000 (3) |
| C12 | 0.128 (5) | 0.118 (5) | 0.049 (3) | −0.017 (4) | 0.020 (3) | −0.012 (3) |
| N5 | 0.089 (3) | 0.070 (3) | 0.0436 (18) | −0.019 (2) | 0.021 (2) | −0.007 (2) |
| O1' | 0.078 (7) | 0.052 (5) | 0.033 (2) | −0.005 (4) | 0.020 (4) | −0.008 (3) |
| C11' | 0.062 (4) | 0.067 (4) | 0.041 (2) | −0.019 (3) | 0.014 (3) | −0.008 (3) |
| C13' | 0.140 (5) | 0.126 (5) | 0.068 (3) | 0.001 (4) | 0.051 (3) | 0.000 (3) |
| C12' | 0.128 (5) | 0.118 (5) | 0.049 (3) | −0.017 (4) | 0.020 (3) | −0.012 (3) |
| N5' | 0.089 (3) | 0.070 (3) | 0.0436 (18) | −0.019 (2) | 0.021 (2) | −0.007 (2) |
| C1—C6 | 1.381 (4) | Co1—O1' | 2.20 (2) |
| C1—C2 | 1.383 (3) | N2—S1 | 1.5941 (18) |
| C1—H1A | 0.9300 | N4—H4B | 0.8600 |
| C2—C3 | 1.385 (3) | N4—H4C | 0.8600 |
| C2—S1 | 1.760 (2) | O2—S1 | 1.4412 (17) |
| C3—C4 | 1.380 (4) | O3—S1 | 1.4470 (17) |
| C3—H3A | 0.9300 | O1—C11 | 1.216 (13) |
| C4—C5 | 1.390 (4) | C11—N5 | 1.342 (10) |
| C4—H4A | 0.9300 | C11—H11A | 0.9300 |
| C5—N4 | 1.370 (3) | C13—N5 | 1.457 (9) |
| C5—C6 | 1.396 (4) | C13—H13A | 0.9602 |
| C6—H6A | 0.9300 | C13—H13B | 0.9597 |
| C7—N3 | 1.333 (3) | C13—H13C | 0.9600 |
| C7—N1 | 1.360 (3) | C13—H12E | 0.8765 |
| C7—N2 | 1.364 (3) | C12—N5 | 1.489 (11) |
| C8—N3 | 1.339 (3) | C12—H12A | 0.9599 |
| C8—C9 | 1.378 (3) | C12—H12B | 0.9600 |
| C8—H8A | 0.9300 | C12—H12C | 0.9601 |
| C9—C10 | 1.373 (4) | O1'—C11' | 1.244 (17) |
| C9—H9A | 0.9300 | C11'—N5' | 1.694 (14) |
| C10—N1 | 1.327 (3) | C11'—H11B | 0.9593 |
| C10—H10A | 0.9300 | C13'—N5' | 1.386 (13) |
| Co1—O1i | 2.065 (19) | C13'—H13D | 0.9600 |
| Co1—O1 | 2.065 (19) | C13'—H13E | 0.9600 |
| Co1—N1 | 2.121 (2) | C13'—H13F | 0.9600 |
| Co1—N1i | 2.121 (2) | C12'—N5' | 1.458 (13) |
| Co1—N2 | 2.1460 (18) | C12'—H12D | 0.9597 |
| Co1—N2i | 2.1460 (18) | C12'—H12E | 0.9601 |
| Co1—O1'i | 2.20 (2) | C12'—H12F | 0.9601 |
| C6—C1—C2 | 120.6 (2) | N5—C13—H13B | 107.4 |
| C6—C1—H1A | 119.7 | H13A—C13—H13B | 109.5 |
| C2—C1—H1A | 119.7 | N5—C13—H13C | 106.4 |
| C1—C2—C3 | 118.7 (2) | H13A—C13—H13C | 109.4 |
| C1—C2—S1 | 120.66 (19) | H13B—C13—H13C | 109.5 |
| C3—C2—S1 | 120.62 (18) | N5—C13—H12E | 53.8 |
| C4—C3—C2 | 120.9 (2) | H13A—C13—H12E | 77.9 |
| C4—C3—H3A | 119.6 | H13B—C13—H12E | 85.1 |
| C2—C3—H3A | 119.6 | H13C—C13—H12E | 159.2 |
| C3—C4—C5 | 120.9 (3) | N5—C13—H12F | 63.8 |
| C3—C4—H4A | 119.6 | H13A—C13—H12F | 83.9 |
| C5—C4—H4A | 119.6 | H13B—C13—H12F | 166.5 |
| N4—C5—C4 | 120.8 (3) | H13C—C13—H12F | 65.9 |
| N4—C5—C6 | 121.2 (3) | H12E—C13—H12F | 96.5 |
| C4—C5—C6 | 117.9 (2) | N5—C12—H12A | 157.8 |
| C1—C6—C5 | 121.0 (2) | N5—C12—H12B | 88.6 |
| C1—C6—H6A | 119.5 | H12A—C12—H12B | 109.5 |
| C5—C6—H6A | 119.5 | N5—C12—H12C | 74.6 |
| N3—C7—N1 | 125.2 (2) | H12A—C12—H12C | 109.5 |
| N3—C7—N2 | 125.86 (19) | H12B—C12—H12C | 109.5 |
| N1—C7—N2 | 108.91 (19) | N5—C12—H13E | 125.9 |
| N3—C8—C9 | 123.7 (2) | H12A—C12—H13E | 53.6 |
| N3—C8—H8A | 118.2 | H12B—C12—H13E | 70.9 |
| C9—C8—H8A | 118.2 | H12C—C12—H13E | 159.1 |
| C10—C9—C8 | 117.0 (2) | N5—C12—H13F | 153.6 |
| C10—C9—H9A | 121.5 | H12B—C12—H13F | 117.7 |
| C8—C9—H9A | 121.5 | H12C—C12—H13F | 92.7 |
| N1—C10—C9 | 121.3 (2) | H13E—C12—H13F | 70.1 |
| N1—C10—H10A | 119.3 | C11—N5—C13 | 141.8 (7) |
| C9—C10—H10A | 119.3 | C11—N5—C12 | 99.2 (6) |
| O1i—Co1—O1 | 180.0 (10) | C13—N5—C12 | 119.0 (6) |
| O1i—Co1—N1 | 84.2 (3) | C11—N5—H12E | 149.4 |
| O1—Co1—N1 | 95.8 (3) | C12—N5—H12E | 95.2 |
| O1i—Co1—N1i | 95.8 (3) | C11—N5—H12F | 132.3 |
| O1—Co1—N1i | 84.2 (3) | C13—N5—H12F | 49.4 |
| N1—Co1—N1i | 180.00 (11) | C12—N5—H12F | 92.0 |
| O1i—Co1—N2 | 89.0 (6) | H12E—N5—H12F | 73.5 |
| O1—Co1—N2 | 91.0 (6) | C11'—O1'—Co1 | 124.5 (17) |
| N1—Co1—N2 | 62.59 (7) | O1'—C11'—N5' | 87.5 (14) |
| N1i—Co1—N2 | 117.41 (7) | O1'—C11'—H11B | 124.6 |
| O1i—Co1—N2i | 91.0 (6) | N5'—C11'—H11B | 143.7 |
| O1—Co1—N2i | 89.0 (6) | N5'—C13'—H12A | 99.0 |
| N1—Co1—N2i | 117.41 (7) | N5'—C13'—H13D | 115.4 |
| N1i—Co1—N2i | 62.59 (7) | H12A—C13'—H13D | 126.7 |
| N2—Co1—N2i | 180.0 | N5'—C13'—H13E | 108.1 |
| O1i—Co1—O1'i | 10.6 (8) | H12A—C13'—H13E | 95.5 |
| O1—Co1—O1'i | 169.4 (8) | H13D—C13'—H13E | 109.5 |
| N1—Co1—O1'i | 94.1 (5) | N5'—C13'—H13F | 104.7 |
| N1i—Co1—O1'i | 85.9 (5) | H13D—C13'—H13F | 109.5 |
| N2—Co1—O1'i | 90.2 (7) | H13E—C13'—H13F | 109.5 |
| N2i—Co1—O1'i | 89.8 (7) | N5'—C12'—H13A | 154.8 |
| O1i—Co1—O1' | 169.4 (8) | N5'—C12'—H12B | 60.6 |
| O1—Co1—O1' | 10.6 (8) | H13A—C12'—H12B | 117.7 |
| N1—Co1—O1' | 85.9 (5) | N5'—C12'—H12C | 54.9 |
| N1i—Co1—O1' | 94.1 (5) | H13A—C12'—H12C | 150.1 |
| N2—Co1—O1' | 89.8 (7) | H12B—C12'—H12C | 75.3 |
| N2i—Co1—O1' | 90.2 (7) | N5'—C12'—H12D | 131.7 |
| O1'i—Co1—O1' | 180.000 (3) | H13A—C12'—H12D | 66.3 |
| C10—N1—C7 | 117.6 (2) | H12B—C12'—H12D | 78.5 |
| C10—N1—Co1 | 147.50 (17) | H12C—C12'—H12D | 92.6 |
| C7—N1—Co1 | 94.85 (14) | N5'—C12'—H12E | 92.3 |
| C7—N2—S1 | 123.96 (15) | H13A—C12'—H12E | 62.9 |
| C7—N2—Co1 | 93.64 (13) | H12B—C12'—H12E | 85.1 |
| S1—N2—Co1 | 142.24 (11) | H12C—C12'—H12E | 146.9 |
| C7—N3—C8 | 115.21 (19) | H12D—C12'—H12E | 109.5 |
| C5—N4—H4B | 120.0 | N5'—C12'—H12F | 102.2 |
| C5—N4—H4C | 120.0 | H13A—C12'—H12F | 83.3 |
| H4B—N4—H4C | 120.0 | H12B—C12'—H12F | 158.7 |
| O2—S1—O3 | 115.11 (11) | H12C—C12'—H12F | 84.4 |
| O2—S1—N2 | 113.67 (10) | H12D—C12'—H12F | 109.5 |
| O3—S1—N2 | 104.78 (10) | H12E—C12'—H12F | 109.5 |
| O2—S1—C2 | 107.31 (11) | C13'—N5'—C12' | 119.6 (8) |
| O3—S1—C2 | 108.17 (11) | C13'—N5'—C11' | 138.9 (8) |
| N2—S1—C2 | 107.48 (10) | C12'—N5'—C11' | 101.2 (8) |
| C11—O1—Co1 | 129.0 (12) | C13'—N5'—H12B | 70.6 |
| O1—C11—N5 | 157.5 (12) | C12'—N5'—H12B | 57.6 |
| O1—C11—H11A | 101.2 | C11'—N5'—H12B | 137.0 |
| N5—C11—H11A | 101.2 | C13'—N5'—H12C | 87.5 |
| O1—C11—H11B | 118.0 | C12'—N5'—H12C | 49.6 |
| N5—C11—H11B | 84.2 | C11'—N5'—H12C | 126.1 |
| N5—C13—H13A | 114.5 | H12B—N5'—H12C | 71.3 |
| H··· | ||||
| N4—H4 | 0.86 | 2.31 | 3.112 (3) | 155 |
| N4—H4 | 0.86 | 2.27 | 2.951 (3) | 136 |
Selected bond lengths (Å)
| Co1—O1 | 2.065 (19) |
| Co1—N1 | 2.121 (2) |
| Co1—N2 | 2.1460 (18) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N4—H4 | 0.86 | 2.31 | 3.112 (3) | 155 |
| N4—H4 | 0.86 | 2.27 | 2.951 (3) | 136 |
Symmetry codes: (i) ; (ii) .